Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 3.1e-195 684.9 331 100.0
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 3.8e-193 677.9 331 99.4
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 2.0e-149 532.7 385 68.3
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 3.7e-148 528.5 389 69.4
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 3.9e-145 518.5 390 66.2
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 3.9e-137 491.9 390 63.1
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.2e-135 486.9 388 63.7
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 4.7e-135 485.0 387 63.3
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 4.7e-135 485.0 385 62.3
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 4.0e-134 481.9 421 58.9
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 6.8e-134 481.1 389 60.9
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 6.8e-134 481.1 389 60.9
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 3.4e-133 478.8 397 60.7
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 3.4e-133 478.8 384 63.0
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 9.9e-133 477.2 384 62.8
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 2.9e-132 475.7 386 60.6
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 2.4e-131 472.6 383 61.4
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 7.1e-131 471.1 363 62.5
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.2e-130 470.3 384 62.8
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 1.2e-130 470.3 385 60.0
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 1.3e-129 466.8 386 60.1
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 1.3e-129 466.8 385 60.0
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 4.3e-128 461.8 391 58.8
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 6.2e-127 458.0 389 60.2
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 1.4e-126 456.8 388 57.2
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 3.1e-126 455.7 391 58.3
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 4.0e-126 455.3 391 58.3
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 5.3e-126 454.9 391 59.1
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 9.0e-126 454.1 387 57.9
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 1.2e-125 453.8 383 58.5
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 1.5e-125 453.4 387 58.7
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 3.4e-125 452.2 393 57.8
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 9.9e-125 450.7 388 58.5
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 2.9e-124 449.1 394 57.6
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 3.8e-124 448.7 384 58.3
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 6.4e-124 448.0 384 58.1
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 6.4e-124 448.0 384 58.1
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 8.4e-124 447.6 388 58.5
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 1.4e-123 446.8 392 59.7
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.4e-123 446.8 371 60.4
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 1.9e-123 446.4 390 56.9
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 2.4e-123 446.0 383 57.7
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 7.1e-123 444.5 395 57.2
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 3.5e-122 442.2 390 57.2
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 6.0e-122 441.4 389 57.3
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 7.9e-122 441.0 387 58.7
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 6.6e-121 438.0 390 55.9
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 6.6e-121 438.0 442 52.9
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 1.1e-120 437.2 371 58.8
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 3.3e-120 435.6 387 57.9
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 1.3e-119 433.7 387 58.4
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 1.6e-119 433.3 371 58.8
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 3.6e-119 432.2 394 55.6
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 1.4e-118 430.3 390 59.5
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 1.8e-118 429.9 391 56.5
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 3.1e-118 429.1 392 55.6
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 3.1e-118 429.1 391 56.5
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 4.5e-117 425.2 397 56.9
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 4.5e-117 425.2 389 56.8
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 2.2e-116 422.9 440 51.4
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 6.4e-116 421.4 395 54.9
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 2.4e-115 419.5 394 56.1
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 2.7e-114 416.0 400 54.5
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 2.7e-114 416.0 387 56.1
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 3.5e-114 415.6 340 61.2
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 1.0e-113 414.1 324 63.9
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 1.3e-113 413.7 394 56.3
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 3.9e-113 412.1 385 56.1
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 5.1e-113 411.8 402 55.5
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 5.1e-113 411.8 371 57.4
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 8.7e-113 411.0 410 53.4
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 4.3e-112 408.7 337 61.1
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 5.6e-112 408.3 392 55.4
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 1.3e-111 407.1 387 54.3
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 6.2e-111 404.8 380 54.5
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 2.6e-109 399.4 384 54.4
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 1.0e-108 397.5 394 54.6
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 2.9e-108 396.0 391 55.2
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 6.5e-108 394.8 386 53.6
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 7.1e-107 391.3 427 50.8
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.2e-106 390.6 390 52.3
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 7.9e-106 387.9 384 53.1
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 2.3e-105 386.3 392 52.8
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 2.3e-105 386.3 344 56.4
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 3.0e-105 386.0 392 52.6
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 2.5e-104 382.9 383 51.7
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 9.6e-104 380.9 373 54.2
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 2.1e-103 379.8 391 51.7
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 2.8e-103 379.4 397 52.1
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.7e-100 370.2 392 51.5
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 2.2e-100 369.8 384 50.5
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 1.9e-99 366.7 409 50.4
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 1.2e-98 364.0 393 51.9
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.2e-98 364.0 368 52.4
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 1.3e-97 360.5 417 49.6
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 2.3e-97 359.8 392 50.3
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 1.1e-96 357.5 388 52.6
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 9.7e-96 354.4 384 48.7
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 1.3e-95 354.0 390 52.1
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 3.1e-94 349.4 392 49.7
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 4.1e-94 349.0 389 51.7
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 5.9e-93 345.1 340 54.7
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 1.0e-92 344.4 390 51.3
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 1.1e-91 340.9 389 50.1
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 4.6e-90 335.5 399 46.4
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 2.9e-84 316.2 210 75.2
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 7.2e-83 311.6 301 52.5
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 2.1e-82 310.1 203 70.4
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 1.0e-76 291.2 215 68.4
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 2.2e-71 273.5 258 57.0
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 1.0e-68 264.6 167 77.2
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 3.2e-67 259.6 282 50.4
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 6.3e-63 245.4 381 38.6
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 2.0e-61 240.4 225 56.9
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 4.7e-58 229.2 377 38.7
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.2e-56 224.6 377 38.5
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 3.4e-56 223.0 136 75.0
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 1.8e-54 217.2 348 38.5
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 1.2e-53 214.5 174 57.5
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 3.0e-49 199.9 188 54.3
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 2.5e-43 180.3 299 38.1
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 4.7e-42 176.0 139 65.5
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 8.0e-42 175.3 126 64.3
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 1.7e-39 167.5 174 50.6
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 3.3e-35 153.3 122 63.9
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 2.6e-32 143.7 358 31.3
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 4.1e-30 136.3 176 47.2
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 2.7e-29 133.7 148 47.3
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 2.9e-23 113.6 343 27.7
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 5.8e-16 89.4 163 35.6
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 4.0e-09 66.6 112 35.7
Prupe.8G259600 Prunus persica HOM05D005667 ORTHO05D007299 4.5e-08 63.2 44 77.3
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 2.9e-07 60.5 136 30.9
Pp3c23_13260 Physcomitrium patens HOM05D005508 ORTHO05D006882 8.4e-07 58.9 167 30.5


User provided reference genes

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