Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050040 Camellia sinensis var. sinensis HOM05D006023 ORTHO05D007377 6.9e-108 394.0 208 100.0
Actinidia14795 Actinidia chinensis HOM05D006023 ORTHO05D007377 1.5e-86 323.2 208 84.1
Dinv28972 Davidia involucrata HOM05D006023 ORTHO05D007377 7.0e-84 314.3 202 82.7
Actinidia09185 Actinidia chinensis HOM05D006023 ORTHO05D007377 1.3e-82 310.1 208 83.7
Hma1.2p1_1379F.1_g279210 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 5.0e-82 308.1 208 78.4
TAR375G0242 Trochodendron aralioides HOM05D006023 ORTHO05D007377 1.9e-81 306.2 208 77.4
Nn5g27684 Nelumbo nucifera HOM05D006023 ORTHO05D007377 2.2e-77 292.7 207 77.8
Cfa012466 Carpinus fangiana HOM05D006023 ORTHO05D007377 7.0e-76 287.7 197 78.7
Rhsim07G0128700 Rhododendron simsii HOM05D006023 ORTHO05D007377 1.6e-75 286.6 239 67.8
Lj2A236G57 Lonicera japonica HOM05D006023 ORTHO05D007377 2.7e-75 285.8 208 76.0
GSVIVG01013134001 Vitis vinifera HOM05D006023 ORTHO05D007377 2.9e-74 282.3 197 75.6
Prupe.5G032500 Prunus persica HOM05D006023 ORTHO05D007377 3.8e-74 282.0 197 74.6
Eucgr.D02210 Eucalyptus grandis HOM05D006023 ORTHO05D007377 5.0e-74 281.6 197 76.1
Manes.02G087300 Manihot esculenta HOM05D006023 ORTHO05D007377 1.1e-73 280.4 208 71.6
Hma1.2p1_0303F.1_g118960 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 3.2e-73 278.9 208 72.6
Aqoxy4G02643 Aquilegia oxysepala HOM05D006023 ORTHO05D007377 4.7e-72 275.0 206 70.9
RcHm_v2.0_Chr7g0210231 Rosa chinensis HOM05D006023 ORTHO05D007377 1.8e-71 273.1 212 70.8
Gohir.D08G176200 Gossypium hirsutum HOM05D006023 ORTHO05D007377 2.3e-71 272.7 197 72.6
Gorai.004G184000 Gossypium raimondii HOM05D006023 ORTHO05D007377 2.3e-71 272.7 197 72.6
CiPaw.12G065700 Carya illinoinensis HOM05D006023 ORTHO05D007377 8.8e-71 270.8 197 75.1
RcHm_v2.0_Chr7g0210201 Rosa chinensis HOM05D006023 ORTHO05D007377 8.8e-71 270.8 197 73.6
CsaV3_6G000520 Cucumis sativus L. HOM05D006023 ORTHO05D007377 1.2e-70 270.4 201 73.1
MELO3C021213.2 Cucumis melo HOM05D006023 ORTHO05D007377 1.5e-70 270.0 200 72.5
FAN18G1789 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.0e-70 269.6 211 70.6
TWI81G0073 Tripterygium wilfordii HOM05D006023 ORTHO05D007377 2.0e-70 269.6 198 74.7
Gohir.A06G181300 Gossypium hirsutum HOM05D006023 ORTHO05D007377 2.6e-70 269.2 197 72.1
Gohir.A08G155600 Gossypium hirsutum HOM05D006023 ORTHO05D007377 3.4e-70 268.9 197 71.6
FvH4_5g22440 Fragaria vesca HOM05D006023 ORTHO05D007377 5.7e-70 268.1 211 70.1
Peaxi162Scf00184g00013 Petunia axillaris HOM05D006023 ORTHO05D007377 5.7e-70 268.1 211 71.1
Cc08_g03000 Coffea canephora HOM05D006023 ORTHO05D007377 7.5e-70 267.7 197 72.6
MBI04_g41609_MAGBIO Magnolia biondii HOM05D006023 ORTHO05D007377 7.5e-70 267.7 205 69.3
Sc01g0007360 Simmondsia chinensis HOM05D006023 ORTHO05D007377 9.8e-70 267.3 201 71.6
FAN08G2226 Fragaria x ananassa HOM05D006023 ORTHO05D007377 3.7e-69 265.4 211 69.2
FAN13G0319 Fragaria x ananassa HOM05D006023 ORTHO05D007377 3.7e-69 265.4 211 69.2
Oeu006244.1 Olea europaea HOM05D006023 ORTHO05D007377 3.7e-69 265.4 199 69.8
FAN04G1629 Fragaria x ananassa HOM05D006023 ORTHO05D007377 4.8e-69 265.0 209 69.4
Lsat_1_v5_gn_6_80341 Lactuca sativa HOM05D006023 ORTHO05D007377 4.8e-69 265.0 209 68.9
Thecc.08G177100 Theobroma cacao HOM05D006023 ORTHO05D007377 4.8e-69 265.0 196 71.4
Migut.F00744 Erythranthe guttata HOM05D006023 ORTHO05D007377 8.3e-69 264.2 203 70.4
Nitab4.5_0004555g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 1.1e-68 263.8 201 72.1
Atru.chr6.1650 Acer truncatum HOM05D006023 ORTHO05D007377 1.4e-68 263.5 197 71.1
COL.COLO4_16998 Corchorus olitorius HOM05D006023 ORTHO05D007377 1.4e-68 263.5 198 74.2
Gorai.010G220500 Gossypium raimondii HOM05D006023 ORTHO05D007377 1.4e-68 263.5 197 69.5
Glyma.10G212800 Glycine max HOM05D006023 ORTHO05D007377 1.8e-68 263.1 207 68.1
Lalb_Chr17g0341511 Lupinus albus HOM05D006023 ORTHO05D007377 2.4e-68 262.7 194 71.6
Ca_10583_v3 Cicer arietinum L. HOM05D006023 ORTHO05D007377 4.1e-68 261.9 218 67.0
Gohir.D06G188100 Gossypium hirsutum HOM05D006023 ORTHO05D007377 5.4e-68 261.5 197 69.5
arahy.Tifrunner.gnm1.ann1.NMD1RU Arachis hypogaea HOM05D006023 ORTHO05D007377 9.1e-68 260.8 206 68.9
Lj5g0000896 Lotus japonicus HOM05D006023 ORTHO05D007377 9.1e-68 260.8 218 67.4
PSO782G2387 Papaver somniferum HOM05D006023 ORTHO05D007377 1.2e-67 260.4 201 69.7
ECA240G0359 Erigeron canadensis HOM05D006023 ORTHO05D007377 1.6e-67 260.0 201 69.7
Potri.003G093800 Populus trichocarpa HOM05D006023 ORTHO05D007377 2.0e-67 259.6 203 71.4
TPR.G1759 Trifolium pratense HOM05D006023 ORTHO05D007377 2.0e-67 259.6 205 67.8
SGA_v2.0_scaffold6G03147 Striga asiatica HOM05D006023 ORTHO05D007377 2.7e-67 259.2 204 69.1
arahy.Tifrunner.gnm1.ann1.T01SKW Arachis hypogaea HOM05D006023 ORTHO05D007377 3.5e-67 258.8 206 68.4
Glyma.20G178200 Glycine max HOM05D006023 ORTHO05D007377 4.5e-67 258.5 207 69.1
BcaB05g21996 Brassica carinata HOM05D006023 ORTHO05D007377 5.9e-67 258.1 203 70.0
Hund11133 Selenicereus undatus HOM05D006023 ORTHO05D007377 5.9e-67 258.1 211 66.4
Sed0006289 Sechium edule HOM05D006023 ORTHO05D007377 1.3e-66 256.9 197 72.1
arahy.Tifrunner.gnm1.ann1.7BP5M1 Arachis hypogaea HOM05D006023 ORTHO05D007377 1.7e-66 256.5 206 68.0
Thhalv10014686m.g Eutrema salsugineum HOM05D006023 ORTHO05D007377 1.7e-66 256.5 199 70.9
Sp6g15140 Schrenkiella parvula HOM05D006023 ORTHO05D007377 1.7e-66 256.5 201 70.6
Sopen08g025290 Solanum pennellii HOM05D006023 ORTHO05D007377 1.7e-66 256.5 201 70.1
Medtr1g095620 Medicago truncatula HOM05D006023 ORTHO05D007377 3.8e-66 255.4 205 67.8
Phvul.007G092700 Phaseolus vulgaris HOM05D006023 ORTHO05D007377 8.6e-66 254.2 206 68.9
Nitab4.5_0002808g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 1.1e-65 253.8 190 70.0
PGR031G2123 Punica granatum HOM05D006023 ORTHO05D007377 1.1e-65 253.8 197 69.5
vmacro14181 Vaccinium macrocarpon HOM05D006023 ORTHO05D007377 1.1e-65 253.8 365 45.5
Carub.0008s1318 Capsella rubella HOM05D006023 ORTHO05D007377 1.5e-65 253.4 189 72.0
AL8G27520 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 1.9e-65 253.1 189 71.4
PSO675G2981 Papaver somniferum HOM05D006023 ORTHO05D007377 1.9e-65 253.1 209 65.6
BraA02t06203Z Brassica rapa HOM05D006023 ORTHO05D007377 2.5e-65 252.7 202 69.3
PGSC0003DMG400027709 Solanum tuberosum HOM05D006023 ORTHO05D007377 4.2e-65 251.9 201 70.6
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 4.2e-65 251.9 208 68.3
A02p11390 Brassica napus HOM05D006023 ORTHO05D007377 9.5e-65 250.8 202 68.8
C09p42690 Brassica napus HOM05D006023 ORTHO05D007377 9.5e-65 250.8 187 71.7
BolC9t57145H Brassica oleracea HOM05D006023 ORTHO05D007377 9.5e-65 250.8 187 71.7
AT5G52980 Arabidopsis thaliana HOM05D006023 ORTHO05D007377 1.2e-64 250.4 189 70.4
C02p18900 Brassica napus HOM05D006023 ORTHO05D007377 1.2e-64 250.4 202 68.3
BolC2t08031H Brassica oleracea HOM05D006023 ORTHO05D007377 1.2e-64 250.4 202 68.3
CANSAT21G1027 Cannabis sativa HOM05D006023 ORTHO05D007377 1.2e-64 250.4 197 67.5
A10p10460 Brassica napus HOM05D006023 ORTHO05D007377 1.6e-64 250.0 204 68.1
MD06G1036800 Malus domestica HOM05D006023 ORTHO05D007377 8.0e-64 247.7 196 69.4
Cpa.g.c32853 Carica papaya HOM05D006023 ORTHO05D007377 1.0e-63 247.3 206 65.5
THA.LOC104806716 Tarenaya hassleriana HOM05D006023 ORTHO05D007377 1.4e-63 246.9 202 66.3
AL8G27580 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 1.8e-63 246.5 203 68.5
BcaC03g14468 Brassica carinata HOM05D006023 ORTHO05D007377 2.3e-63 246.1 202 68.8
BraA10t43129Z Brassica rapa HOM05D006023 ORTHO05D007377 2.3e-63 246.1 206 67.5
SGA_v2.0_scaffold196G40921 Striga asiatica HOM05D006023 ORTHO05D007377 6.8e-63 244.6 196 68.4
Sopen10g027320 Solanum pennellii HOM05D006023 ORTHO05D007377 8.9e-63 244.2 204 67.2
Aa31LG3G9490 Aethionema arabicum HOM05D006023 ORTHO05D007377 2.0e-62 243.0 199 67.3
Hma1.2p1_0574F.1_g181560 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 2.6e-62 242.7 165 75.8
Hma1.2p1_1379F.1_g279205 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 2.6e-62 242.7 165 75.8
CARHR265970 Cardamine hirsuta HOM05D006023 ORTHO05D007377 9.8e-62 240.7 199 65.8
DCAR_004289 Daucus carota HOM05D006023 ORTHO05D007377 1.3e-61 240.4 198 66.2
EL10Ac5g12082 Beta vulgaris HOM05D006023 ORTHO05D007377 1.1e-60 237.3 211 63.5
Ah.07g200580 Amaranthus hybridus HOM05D006023 ORTHO05D007377 5.4e-60 235.0 207 62.8
HPP92_020908 Vanilla planifolia HOM05D006023 ORTHO05D007377 1.3e-58 230.3 202 59.9
PSO541G2859 Papaver somniferum HOM05D006023 ORTHO05D007377 1.7e-58 229.9 175 67.4
AL4G21070 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 3.3e-57 225.7 215 62.3
unitig_21.g20896 Utricularia gibba HOM05D006023 ORTHO05D007377 3.3e-57 225.7 202 60.9
Psat6g182880 Pisum sativum HOM05D006023 ORTHO05D007377 2.3e-55 219.5 161 72.7
ATR0665G562 Amborella trichopoda HOM05D006023 ORTHO05D007377 4.0e-55 218.8 187 62.0
Ciclev10022247m.g Citrus clementina HOM05D006023 ORTHO05D007377 5.4e-52 208.4 183 63.4
HanXRQChr13g0414191 Helianthus annuus HOM05D006023 ORTHO05D007377 7.8e-51 204.5 155 69.7
CAN.G298.27 Capsicum annuum HOM05D006023 ORTHO05D007377 4.3e-49 198.7 139 77.7
CDE06G2650 Ceratophyllum demersum HOM05D006023 ORTHO05D007377 4.4e-46 188.7 197 59.4
Solyc08g076770.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 3.9e-42 175.6 130 72.3
PGSC0003DMG400017522 Solanum tuberosum HOM05D006023 ORTHO05D007377 4.3e-41 172.2 130 71.5
Zm00001eb024850 Zea mays HOM05D006023 ORTHO05D007377 4.3e-41 172.2 156 58.3
MSTRG.15799 Avicennia marina HOM05D006023 ORTHO05D007377 2.3e-39 166.4 117 74.4
Mapoly0102s0011 Marchantia polymorpha HOM05D006023 ORTHO05D007377 7.5e-38 161.4 183 48.6
Duzib068G1405 Durio zibethinus HOM05D006023 ORTHO05D007377 2.2e-37 159.8 127 68.5
AUR62018698 Chenopodium quinoa HOM05D006023 ORTHO05D007377 1.1e-36 157.5 123 71.5
PSO063G6826 Papaver somniferum HOM05D006023 ORTHO05D007377 1.1e-36 157.5 115 73.9
Pp3c18_16040 Physcomitrium patens HOM05D006023 ORTHO05D007377 1.6e-35 153.7 185 45.9
FAN18G1032 Fragaria x ananassa HOM05D006023 ORTHO05D007377 3.1e-31 139.4 145 55.9
ClCG06G003760 Citrullus lanatus HOM05D006023 ORTHO05D007377 6.4e-29 131.7 103 67.0
CBR_g88177 Chara braunii HOM05D006023 ORTHO05D007377 4.2e-28 129.0 120 55.8
AagrBONN_evm.TU.Sc2ySwM_228.1949 Anthoceros agrestis HOM05D006023 ORTHO05D007377 4.7e-24 115.5 175 43.4
SMO143G0066 Selaginella moellendorffii HOM05D006023 ORTHO05D007377 8.1e-24 114.8 203 37.4
Dinv25231 Davidia involucrata HOM05D006023 ORTHO05D007377 3.1e-23 112.8 68 82.4
FAN18G2414 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.0e-22 110.2 74 79.7
SEGI_27853 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 4.9e-21 105.5 127 50.4
BcaNung06895 Brassica carinata HOM05D006023 ORTHO05D007377 2.5e-17 93.2 79 63.3
Solyc08g076740.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 8.1e-16 88.2 73 65.8
AUR62007305 Chenopodium quinoa HOM05D006023 ORTHO05D007377 9.0e-15 84.7 75 62.7
Cre10.g438750 Chlamydomonas reinhardtii HOM05D006023 ORTHO05D007377 3.4e-14 82.8 180 33.3
SEGI_36898 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 3.4e-14 82.8 55 74.5
MD16G1272600 Malus domestica HOM05D006023 ORTHO05D007377 1.9e-12 77.0 48 79.2
Solyc10g074822.1 Solanum lycopersicum HOM05D006023 ORTHO05D007377 1.6e-11 73.9 47 76.6


User provided reference genes

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