Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 4.4e-147 525.8 596 100.0
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 1.7e-79 301.2 618 81.2
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 2.8e-69 267.3 610 77.2
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 4.8e-69 266.5 612 79.1
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 4.8e-69 266.5 612 79.1
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 9.0e-68 262.3 632 76.3
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 3.4e-67 260.4 607 77.9
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 4.5e-67 260.0 619 74.6
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 3.8e-66 256.9 625 75.7
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 7.9e-64 249.2 616 75.6
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 7.9e-64 249.2 623 75.0
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 2.3e-63 247.7 615 75.4
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 6.7e-63 246.1 616 75.6
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 8.7e-63 245.7 616 75.5
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 1.1e-62 245.4 606 75.1
CiPaw.05G146100 Carya illinoinensis HOM05D006250 ORTHO05D007107 1.1e-62 245.4 620 75.2
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 1.1e-62 245.4 616 75.8
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 2.5e-62 244.2 623 75.1
TWI18G0037 Tripterygium wilfordii HOM05D006250 ORTHO05D007107 9.6e-62 242.3 616 75.3
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 1.6e-61 241.5 614 75.2
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.5e-59 235.0 620 71.0
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 3.4e-59 233.8 618 75.4
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 2.2e-58 231.1 620 73.9
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 5.0e-58 229.9 610 74.9
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 2.1e-56 224.6 246 56.1
arahy.Tifrunner.gnm1.ann1.11GRU6 Arachis hypogaea HOM05D006250 ORTHO05D007107 3.5e-56 223.8 616 71.4
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 3.5e-56 223.8 610 75.1
Eucgr.B03367 Eucalyptus grandis HOM05D006250 ORTHO05D007107 4.6e-56 223.4 617 74.2
Lj6A800T42 Lonicera japonica HOM05D006250 ORTHO05D007107 7.9e-56 222.6 626 72.7
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 1.3e-55 221.9 651 61.0
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 1.8e-55 221.5 627 72.6
arahy.Tifrunner.gnm1.ann1.ST0DQ2 Arachis hypogaea HOM05D006250 ORTHO05D007107 3.0e-55 220.7 618 71.4
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 5.1e-55 219.9 617 74.9
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 5.1e-55 219.9 621 62.8
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 1.5e-54 218.4 623 73.0
Gorai.009G344900 Gossypium raimondii HOM05D006250 ORTHO05D007107 7.4e-54 216.1 608 74.8
Actinidia15003 Actinidia chinensis HOM05D006250 ORTHO05D007107 1.3e-53 215.3 655 70.5
Gohir.D05G321400 Gossypium hirsutum HOM05D006250 ORTHO05D007107 2.2e-53 214.5 608 74.7
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 4.8e-53 213.4 664 70.0
Lalb_Chr09g0326521 Lupinus albus HOM05D006250 ORTHO05D007107 5.3e-52 209.9 611 72.0
Glyma.01G036200 Glycine max HOM05D006250 ORTHO05D007107 6.9e-52 209.5 615 70.7
Glyma.02G029800 Glycine max HOM05D006250 ORTHO05D007107 9.0e-52 209.1 615 72.5
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 2.0e-51 208.0 610 74.3
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 2.6e-51 207.6 261 51.3
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 3.4e-51 207.2 609 74.5
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 3.4e-51 207.2 613 74.1
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 7.7e-51 206.1 624 54.0
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 3.8e-50 203.8 615 64.7
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 6.5e-50 203.0 621 73.9
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 8.5e-50 202.6 611 73.6
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 1.9e-49 201.4 533 80.5
BolC8t49010H Brassica oleracea HOM05D006250 ORTHO05D007107 1.2e-48 198.7 622 72.5
TPR.G13515 Trifolium pratense HOM05D006250 ORTHO05D007107 1.2e-48 198.7 565 75.9
Dinv24907 Davidia involucrata HOM05D006250 ORTHO05D007107 1.6e-48 198.4 465 91.2
BcaC07g38569 Brassica carinata HOM05D006250 ORTHO05D007107 3.6e-48 197.2 614 74.1
BraA08t35306Z Brassica rapa HOM05D006250 ORTHO05D007107 2.3e-47 194.5 617 72.9
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 2.3e-47 194.5 240 48.8
CDE04G2141 Ceratophyllum demersum HOM05D006250 ORTHO05D007107 8.8e-47 192.6 579 74.6
VMungo0720G1586 Vigna mungo HOM05D006250 ORTHO05D007107 2.5e-46 191.0 613 71.0
CARHR010650 Cardamine hirsuta HOM05D006250 ORTHO05D007107 7.4e-46 189.5 619 72.7
AUR62026573 Chenopodium quinoa HOM05D006250 ORTHO05D007107 8.2e-45 186.0 610 72.1
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 1.5e-43 181.8 625 70.4
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 1.5e-43 181.8 573 75.9
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 2.0e-43 181.4 625 70.6
EL10Ac6g13760 Beta vulgaris HOM05D006250 ORTHO05D007107 2.6e-43 181.0 565 75.8
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 2.6e-43 181.0 241 50.6
AUR62039411 Chenopodium quinoa HOM05D006250 ORTHO05D007107 3.4e-43 180.6 610 71.6
MBI18_g16987_MAGBIO Magnolia biondii HOM05D006250 ORTHO05D007107 4.5e-43 180.3 546 76.9
Phvul.002G075400 Phaseolus vulgaris HOM05D006250 ORTHO05D007107 7.7e-43 179.5 241 50.6
Atru.chr11.1955 Acer truncatum HOM05D006250 ORTHO05D007107 1.0e-42 179.1 239 51.0
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 1.7e-42 178.3 257 46.3
VMungo1215G1343 Vigna mungo HOM05D006250 ORTHO05D007107 2.2e-42 177.9 564 75.2
A06p07280 Brassica napus HOM05D006250 ORTHO05D007107 2.9e-42 177.6 236 49.6
BraA06t23934Z Brassica rapa HOM05D006250 ORTHO05D007107 2.9e-42 177.6 236 49.6
Ah.03g132320 Amaranthus hybridus HOM05D006250 ORTHO05D007107 1.1e-41 175.6 639 58.5
Lj2g0015976 Lotus japonicus HOM05D006250 ORTHO05D007107 1.4e-41 175.3 606 72.3
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 1.9e-41 174.9 619 71.2
Medtr5g035590 Medicago truncatula HOM05D006250 ORTHO05D007107 2.5e-41 174.5 250 45.6
Sp1g09140 Schrenkiella parvula HOM05D006250 ORTHO05D007107 3.2e-41 174.1 623 71.1
BcaC05g24872 Brassica carinata HOM05D006250 ORTHO05D007107 4.2e-41 173.7 239 48.5
Thhalv10007114m.g Eutrema salsugineum HOM05D006250 ORTHO05D007107 5.5e-41 173.3 257 45.9
C05p08800 Brassica napus HOM05D006250 ORTHO05D007107 7.2e-41 172.9 236 48.7
BolC5t29626H Brassica oleracea HOM05D006250 ORTHO05D007107 7.2e-41 172.9 236 48.7
AT1G10510 Arabidopsis thaliana HOM05D006250 ORTHO05D007107 3.6e-40 170.6 250 46.0
C08p13750 Brassica napus HOM05D006250 ORTHO05D007107 4.7e-40 170.2 248 45.6
Rhsim12G0124700 Rhododendron simsii HOM05D006250 ORTHO05D007107 6.1e-40 169.9 193 56.5
Nitab4.5_0005722g0060 Nicotiana tabacum HOM05D006250 ORTHO05D007107 7.9e-40 169.5 235 47.2
BcaC05g24932 Brassica carinata HOM05D006250 ORTHO05D007107 2.3e-39 167.9 235 47.7
BcaC07g38607 Brassica carinata HOM05D006250 ORTHO05D007107 2.3e-39 167.9 253 44.7
Psat4g140960 Pisum sativum HOM05D006250 ORTHO05D007107 3.0e-39 167.5 254 45.7
AL1G21310 Arabidopsis lyrata HOM05D006250 ORTHO05D007107 3.9e-39 167.2 249 45.0
A08p33910 Brassica napus HOM05D006250 ORTHO05D007107 6.7e-39 166.4 243 46.1
unitig_749.g13267 Utricularia gibba HOM05D006250 ORTHO05D007107 1.1e-38 165.6 542 65.7
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 4.8e-37 160.2 230 46.1
PGR102G1255 Punica granatum HOM05D006250 ORTHO05D007107 1.1e-36 159.1 464 86.4
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 2.6e-35 154.5 220 45.9
Ca_18091_v3 Cicer arietinum L. HOM05D006250 ORTHO05D007107 4.5e-35 153.7 235 44.7
DCAR_026556 Daucus carota HOM05D006250 ORTHO05D007107 5.9e-35 153.3 156 60.3
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 1.3e-34 152.1 212 47.2
Os06g0237502 Oryza sativa ssp. japonica HOM05D006250 ORTHO05D007107 1.3e-34 152.1 548 72.1
Hund05952 Selenicereus undatus HOM05D006250 ORTHO05D007107 2.7e-32 144.4 614 70.5
ATR0829G105 Amborella trichopoda HOM05D006250 ORTHO05D007107 8.0e-32 142.9 466 82.2
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 7.5e-30 136.3 218 44.5
vmacro16283 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 2.2e-29 134.8 465 83.0
Lsat_1_v5_gn_4_95161 Lactuca sativa HOM05D006250 ORTHO05D007107 8.2e-29 132.9 89 73.0
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 7.0e-28 129.8 185 48.1
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 7.0e-28 129.8 185 48.1
Peaxi162Scf00421g00828 Petunia axillaris HOM05D006250 ORTHO05D007107 5.0e-26 123.6 515 75.7
Zm00001eb371900 Zea mays HOM05D006250 ORTHO05D007107 1.1e-25 122.5 546 69.2
Sc11g0001380 Simmondsia chinensis HOM05D006250 ORTHO05D007107 1.5e-25 122.1 218 43.1
Hma1.2p1_2649F.1_g326137 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 5.7e-22 110.2 234 91.0
HPP92_017346 Vanilla planifolia HOM05D006250 ORTHO05D007107 9.8e-22 109.4 594 67.7
SEGI_23986 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 6.3e-21 106.7 553 70.3
Nitab4.5_0000257g0160 Nicotiana tabacum HOM05D006250 ORTHO05D007107 2.0e-19 101.7 241 34.4
vmacro16284 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 3.5e-19 100.9 197 40.6
TAR629G0016 Trochodendron aralioides HOM05D006250 ORTHO05D007107 1.2e-16 92.4 55 83.6
Lsat_1_v5_gn_4_84060 Lactuca sativa HOM05D006250 ORTHO05D007107 6.1e-16 90.1 64 67.2
AagrBONN_evm.TU.Sc2ySwM_344.3920 Anthoceros agrestis HOM05D006250 ORTHO05D007107 5.7e-14 83.6 173 34.7
SEGI_34898 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 2.8e-13 81.3 226 85.0
SGA_v2.0_scaffold68G22967 Striga asiatica HOM05D006250 ORTHO05D007107 2.7e-11 74.7 124 42.7
Mapoly0090s0039 Marchantia polymorpha HOM05D006250 ORTHO05D007107 3.5e-11 74.3 133 38.3
Pp3c14_24560 Physcomitrium patens HOM05D006250 ORTHO05D007107 1.5e-09 68.9 138 39.1
Pp3c14_24566 Physcomitrium patens HOM05D006250 ORTHO05D007107 1.5e-09 68.9 138 39.1
DCAR_026558 Daucus carota HOM05D006250 ORTHO05D007107 1.9e-09 68.6 218 32.6
Cpa.g.sc367.5 Carica papaya HOM05D006250 ORTHO05D007107 1.2e-08 65.9 118 40.7
SMO116G0024 Selaginella moellendorffii HOM05D006250 ORTHO05D007107 4.7e-08 63.9 62 50.0


User provided reference genes

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