Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049977 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 1.1e-50 203.0 103 100.0
CSS0015603 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 9.8e-39 163.3 98 85.7
CSS0001505 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 2.2e-38 162.2 99 86.9
CSS0016211 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 4.9e-38 161.0 98 86.7
CSS0045153 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 3.1e-32 141.7 101 79.2
CSS0040497 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 1.5e-31 139.4 100 79.0
vmacro05819 Vaccinium macrocarpon HOM05D007293 ORTHO05D009143 2.5e-26 122.1 105 65.7
Rhsim10G0022800 Rhododendron simsii HOM05D007293 ORTHO05D009143 8.1e-25 117.1 108 62.0
Dinv33495 Davidia involucrata HOM05D007293 ORTHO05D009143 2.9e-22 108.6 105 58.1
Dinv35058 Davidia involucrata HOM05D007293 ORTHO05D009143 2.9e-22 108.6 108 57.4
Cc07_g02290 Coffea canephora HOM05D007293 ORTHO05D009143 1.0e-19 100.1 99 56.6
MSTRG.24016 Avicennia marina HOM05D007293 ORTHO05D009143 1.1e-18 96.7 102 58.8
Oeu062917.1 Olea europaea HOM05D007293 ORTHO05D009143 7.3e-18 94.0 103 55.3
Migut.K01369 Erythranthe guttata HOM05D007293 ORTHO05D009143 4.0e-16 88.2 104 57.7
Migut.H00123 Erythranthe guttata HOM05D007293 ORTHO05D009143 5.3e-16 87.8 103 53.4
Lj7A591G78 Lonicera japonica HOM05D007293 ORTHO05D009143 7.6e-15 84.0 106 53.8
GSVIVG01032483001 Vitis vinifera HOM05D007293 ORTHO05D009143 2.2e-14 82.4 105 49.5
SalBow1G2453 Salvia bowleyana HOM05D005882 ORTHO05D009143 6.4e-14 80.9 98 54.1
Hma1.2p1_0802F.1_g220360 Hydrangea macrophylla HOM05D007293 ORTHO05D009143 2.4e-13 79.0 103 54.4
Actinidia06026 Actinidia chinensis HOM05D007293 ORTHO05D009143 5.4e-13 77.8 50 78.0
DCAR_011205 Daucus carota HOM05D007293 ORTHO05D009143 1.6e-12 76.3 104 49.0
Lsat_1_v5_gn_4_182280 Lactuca sativa HOM05D007293 ORTHO05D009143 6.0e-12 74.3 98 50.0
ECA246G2262 Erigeron canadensis HOM05D007293 ORTHO05D009143 3.0e-11 72.0 94 48.9
Aqoxy3G02974 Aquilegia oxysepala HOM05D007293 ORTHO05D009143 3.9e-11 71.6 69 56.5
HanXRQChr08g0220621 Helianthus annuus HOM05D007293 ORTHO05D009143 3.9e-11 71.6 98 48.0
MD13G1091900 Malus domestica HOM05D007293 ORTHO05D009143 8.7e-11 70.5 98 43.9
TAR622G0242 Trochodendron aralioides HOM05D007293 ORTHO05D009143 8.7e-11 70.5 105 48.6
MBI10_g11075_MAGBIO Magnolia biondii HOM05D007293 ORTHO05D009143 9.6e-10 67.0 63 55.6
THA.LOC104822141 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 2.1e-09 65.9 98 42.9
MD16G1092500 Malus domestica HOM05D007293 ORTHO05D009143 6.2e-09 64.3 98 41.8
TWI75G0451 Tripterygium wilfordii HOM05D007293 ORTHO05D009143 8.1e-09 63.9 105 44.8
BcaC03g15179 Brassica carinata HOM05D007293 ORTHO05D009143 1.1e-08 63.5 100 43.0
C02p27590 Brassica napus HOM05D007293 ORTHO05D009143 1.1e-08 63.5 100 43.0
Carub.0002s1704 Capsella rubella HOM05D007293 ORTHO05D009143 1.1e-08 63.5 101 42.6
Atru.chr11.2025 Acer truncatum HOM05D007293 ORTHO05D009143 1.4e-08 63.2 100 42.0
Sp5g25470 Schrenkiella parvula HOM05D007293 ORTHO05D009143 1.4e-08 63.2 99 40.4
AUR62005378 Chenopodium quinoa HOM05D007293 ORTHO05D009143 1.8e-08 62.8 94 44.7
Thhalv10019350m.g Eutrema salsugineum HOM05D007293 ORTHO05D009143 1.8e-08 62.8 99 40.4
THA.LOC104808972 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 1.8e-08 62.8 101 43.6
AUR62014041 Chenopodium quinoa HOM05D007293 ORTHO05D009143 2.4e-08 62.4 93 41.9
Thecc.02G249100 Theobroma cacao HOM05D007293 ORTHO05D009143 2.4e-08 62.4 100 45.0
PSO063G5020 Papaver somniferum HOM05D007293 ORTHO05D009143 3.1e-08 62.0 97 44.3
AL2G29660 Arabidopsis lyrata HOM05D007293 ORTHO05D009143 4.0e-08 61.6 101 40.6
AT1G70350 Arabidopsis thaliana HOM05D007293 ORTHO05D009143 5.3e-08 61.2 101 40.6
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 5.3e-08 61.2 96 43.8
CARHR063530 Cardamine hirsuta HOM05D007293 ORTHO05D009143 5.3e-08 61.2 101 40.6
Prupe.5G015600 Prunus persica HOM05D007293 ORTHO05D009143 9.0e-08 60.5 101 38.6
BcaB03g15542 Brassica carinata HOM05D007293 ORTHO05D009143 1.5e-07 59.7 100 41.0
A02p16490 Brassica napus HOM05D007293 ORTHO05D009143 1.5e-07 59.7 100 41.0
BraA02t06707Z Brassica rapa HOM05D007293 ORTHO05D009143 1.5e-07 59.7 100 41.0
COL.COLO4_36768 Corchorus olitorius HOM05D007293 ORTHO05D009143 1.5e-07 59.7 109 43.1
Psat0s2875g0160 Pisum sativum HOM05D007293 ORTHO05D009143 1.5e-07 59.7 99 41.4
BcaC08g45820 Brassica carinata HOM05D007293 ORTHO05D009143 2.0e-07 59.3 98 39.8
BolC6t38732H Brassica oleracea HOM05D007293 ORTHO05D009143 2.0e-07 59.3 98 39.8
RcHm_v2.0_Chr4g0443851 Rosa chinensis HOM05D007293 ORTHO05D009143 2.0e-07 59.3 98 38.8
C06p36130 Brassica napus HOM05D007293 ORTHO05D009143 2.6e-07 58.9 98 39.8
BolC2t08814H Brassica oleracea HOM05D007293 ORTHO05D009143 3.4e-07 58.5 100 41.0
Hund05995 Selenicereus undatus HOM05D007293 ORTHO05D009143 4.5e-07 58.2 99 42.4
Sc04g0009130 Simmondsia chinensis HOM05D007293 ORTHO05D009143 4.5e-07 58.2 101 42.6
Nn3g16892 Nelumbo nucifera HOM05D007293 ORTHO05D009143 5.8e-07 57.8 40 70.0
Ciclev10033010m.g Citrus clementina HOM05D007293 ORTHO05D009143 7.6e-07 57.4 98 40.8
FAN12G1260 Fragaria x ananassa HOM05D007293 ORTHO05D009143 7.6e-07 57.4 98 37.8
RcHm_v2.0_Chr4g0443841 Rosa chinensis HOM05D007293 ORTHO05D009143 7.6e-07 57.4 104 41.3
Phvul.002G071600 Phaseolus vulgaris HOM05D007293 ORTHO05D009143 9.9e-07 57.0 99 42.4
BcaB05g24561 Brassica carinata HOM05D007293 ORTHO05D009143 1.3e-06 56.6 101 39.6
CANSAT01G1482 Cannabis sativa HOM05D007293 ORTHO05D009143 1.3e-06 56.6 103 39.8
CDE06G2495 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 1.3e-06 56.6 56 53.6
Ca_13998_v3 Cicer arietinum L. HOM05D007293 ORTHO05D009143 1.3e-06 56.6 100 40.0
FvH4_4g34460 Fragaria vesca HOM05D007293 ORTHO05D009143 1.3e-06 56.6 98 37.8
PSO832G1108 Papaver somniferum HOM05D007293 ORTHO05D009143 1.7e-06 56.2 97 43.3
Psat2g106240 Pisum sativum HOM05D007293 ORTHO05D009143 1.7e-06 56.2 99 39.4
PGR119G0124 Punica granatum HOM05D007293 ORTHO05D009143 1.7e-06 56.2 99 39.4
FAN17G1887 Fragaria x ananassa HOM05D007293 ORTHO05D009143 2.9e-06 55.5 98 35.7
FAN22G1529 Fragaria x ananassa HOM05D007293 ORTHO05D009143 2.9e-06 55.5 98 35.7
Duzib251G0045 Durio zibethinus HOM05D007293 ORTHO05D009143 3.8e-06 55.1 103 42.7
Eucgr.H02610 Eucalyptus grandis HOM05D007293 ORTHO05D009143 3.8e-06 55.1 104 42.3
Prupe.1G253900 Prunus persica HOM05D007293 ORTHO05D009143 3.8e-06 55.1 98 38.8
BcaB07g33183 Brassica carinata HOM05D027076 ORTHO05D027107 6.4e-06 54.3 83 42.2
ClCG08G018060 Citrullus lanatus HOM05D007293 ORTHO05D009143 8.4e-06 53.9 98 38.8
Haze_12178 Corylus avellana HOM05D007293 ORTHO05D009143 8.4e-06 53.9 99 40.4
PSO339G0117 Papaver somniferum HOM05D007293 ORTHO05D009143 8.4e-06 53.9 101 39.6
VMungo1215G2593 Vigna mungo HOM05D007293 ORTHO05D009143 8.4e-06 53.9 99 42.4


User provided reference genes

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