Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049943 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D003936 2.7e-97 358.6 176 100.0
Dinv28447 Davidia involucrata HOM05D000008 ORTHO05D003936 8.1e-41 171.0 180 60.0
Dinv35209 Davidia involucrata HOM05D000008 ORTHO05D003936 2.8e-33 146.0 178 55.1
vmacro06685 Vaccinium macrocarpon HOM05D000008 ORTHO05D003936 3.8e-30 135.6 177 50.3
Lj1A996T61 Lonicera japonica HOM05D000008 ORTHO05D003936 8.4e-30 134.4 170 50.0
Duzib084G0227 Durio zibethinus HOM05D000008 ORTHO05D003936 2.7e-28 129.4 178 44.9
Lj1A996T62 Lonicera japonica HOM05D000008 ORTHO05D003936 3.3e-26 122.5 161 49.7
Duzib068G0396 Durio zibethinus HOM05D000008 ORTHO05D003936 9.6e-26 120.9 179 43.6
GSVIVG01028984001 Vitis vinifera HOM05D000008 ORTHO05D003936 2.4e-24 116.3 179 44.1
Peaxi162Scf01464g00024 Petunia axillaris HOM05D000008 ORTHO05D003936 4.0e-24 115.5 159 43.4
CAN.G1382.9 Capsicum annuum HOM05D000008 ORTHO05D003936 1.2e-20 104.0 173 41.6
Cc02_g03050 Coffea canephora HOM05D000008 ORTHO05D003936 1.2e-20 104.0 172 44.2
Duzib205G1242 Durio zibethinus HOM05D000008 ORTHO05D003936 1.2e-20 104.0 179 43.0
Peaxi162Scf01969g00021 Petunia axillaris HOM05D000008 ORTHO05D003936 6.0e-20 101.7 155 40.6
COL.COLO4_14302 Corchorus olitorius HOM05D000008 ORTHO05D003936 1.9e-18 96.7 147 40.1
Gohir.A12G258200 Gossypium hirsutum HOM05D000008 ORTHO05D003936 2.5e-18 96.3 169 39.1
Atru.chr1.464 Acer truncatum HOM05D000008 ORTHO05D003936 3.3e-18 95.9 183 37.2
CiPaw.03G105800 Carya illinoinensis HOM05D000008 ORTHO05D003936 1.6e-17 93.6 161 42.2
QL09p014309 Quercus lobata HOM05D000008 ORTHO05D003936 1.6e-17 93.6 178 38.8
Actinidia32864 Actinidia chinensis HOM05D000008 ORTHO05D003936 2.8e-17 92.8 153 43.1
Actinidia34108 Actinidia chinensis HOM05D000008 ORTHO05D003936 8.1e-17 91.3 138 42.8
Lj1A1002G30 Lonicera japonica HOM05D000008 ORTHO05D003936 2.4e-16 89.7 154 41.6
PGSC0003DMG400014291 Solanum tuberosum HOM05D000008 ORTHO05D003936 3.1e-16 89.4 176 39.8
Gohir.D12G259500 Gossypium hirsutum HOM05D000008 ORTHO05D003936 6.9e-16 88.2 169 36.7
Nitab4.5_0004193g0070 Nicotiana tabacum HOM05D000008 ORTHO05D003936 9.0e-16 87.8 135 44.4
Gorai.008G277900 Gossypium raimondii HOM05D000008 ORTHO05D003936 3.4e-15 85.9 169 36.1
Sopen03g004680 Solanum pennellii HOM05D000008 ORTHO05D003936 7.6e-15 84.7 173 38.7
TAR629G0271 Trochodendron aralioides HOM05D000008 ORTHO05D003936 1.7e-14 83.6 182 37.4
Actinidia03118 Actinidia chinensis HOM05D000008 ORTHO05D003936 2.2e-14 83.2 176 37.5
SalBow4G2807 Salvia bowleyana HOM05D000008 ORTHO05D003936 4.9e-14 82.0 149 41.6
Potri.015G143400 Populus trichocarpa HOM05D000008 ORTHO05D003936 6.4e-14 81.6 173 38.7
Nitab4.5_0000716g0090 Nicotiana tabacum HOM05D000008 ORTHO05D003936 1.1e-13 80.9 104 46.2
SalBow4G3160 Salvia bowleyana HOM05D000008 ORTHO05D003936 1.1e-13 80.9 149 40.9
Haze_13721 Corylus avellana HOM05D000008 ORTHO05D003936 1.4e-13 80.5 172 39.0
Potri.012G140500 Populus trichocarpa HOM05D000008 ORTHO05D003936 1.9e-13 80.1 149 39.6
Solyc03g025870.3 Solanum lycopersicum HOM05D000008 ORTHO05D003936 2.4e-13 79.7 158 38.0
Peaxi162Scf00132g01412 Petunia axillaris HOM05D000008 ORTHO05D003936 3.2e-13 79.3 158 38.0
Manes.06G146600 Manihot esculenta HOM05D000008 ORTHO05D003936 1.6e-12 77.0 146 39.0
Oeu056249.1 Olea europaea HOM05D000008 ORTHO05D003936 1.6e-12 77.0 127 40.9
Sabra15G0153100 Salix brachista HOM05D000008 ORTHO05D003936 4.6e-12 75.5 173 36.4
Nn6g33521 Nelumbo nucifera HOM05D000008 ORTHO05D003936 1.0e-11 74.3 133 36.8
Ciclev10006897m.g Citrus clementina HOM05D000008 ORTHO05D003936 3.0e-11 72.8 199 35.7
TAR375G1031 Trochodendron aralioides HOM05D000008 ORTHO05D003936 3.9e-11 72.4 177 33.9
Gohir.D11G009600 Gossypium hirsutum HOM05D000008 ORTHO05D003936 5.1e-11 72.0 160 38.8
Gorai.007G011100 Gossypium raimondii HOM05D000008 ORTHO05D003936 8.7e-11 71.2 160 38.8
Thecc.03G175800 Theobroma cacao HOM05D000008 ORTHO05D003936 8.7e-11 71.2 82 51.2
Gohir.A11G010300 Gossypium hirsutum HOM05D000008 ORTHO05D003936 1.1e-10 70.9 166 39.2
Oeu024227.1 Olea europaea HOM05D000008 ORTHO05D003936 2.5e-10 69.7 121 39.7
Manes.14G026300 Manihot esculenta HOM05D000008 ORTHO05D003936 3.3e-10 69.3 124 37.9
Oeu022588.1 Olea europaea HOM05D000008 ORTHO05D003936 3.3e-10 69.3 171 34.5
VMungo0464G0750 Vigna mungo HOM05D000008 ORTHO05D003936 4.3e-10 68.9 167 31.7
Prupe.2G293700 Prunus persica HOM05D000008 ORTHO05D003936 9.6e-10 67.8 175 38.3
Oeu022587.1 Olea europaea HOM05D000008 ORTHO05D003936 2.1e-09 66.6 161 36.6
Glyma.16G189400 Glycine max HOM05D000008 ORTHO05D003936 3.7e-09 65.9 167 29.3
DCAR_018194 Daucus carota HOM05D000008 ORTHO05D003936 8.1e-09 64.7 132 34.8
Nitab4.5_0009971g0010 Nicotiana tabacum HOM05D000008 ORTHO05D003936 1.1e-08 64.3 153 33.3
Nn1g01444 Nelumbo nucifera HOM05D000008 ORTHO05D003936 1.8e-08 63.5 137 36.5
HanXRQChr14g0462201 Helianthus annuus HOM05D000008 ORTHO05D003936 2.4e-08 63.2 108 36.1
TAR374G0159 Trochodendron aralioides HOM05D000008 ORTHO05D003936 3.1e-08 62.8 139 34.5
arahy.Tifrunner.gnm1.ann1.TZP4F0 Arachis hypogaea HOM05D000008 ORTHO05D000005 4.0e-08 62.4 164 29.3
Phvul.004G116500 Phaseolus vulgaris HOM05D000008 ORTHO05D003936 6.9e-08 61.6 154 29.9
arahy.Tifrunner.gnm1.ann1.YNS6BW Arachis hypogaea HOM05D000008 ORTHO05D000005 1.5e-07 60.5 163 28.8
MBI18_g09030_MAGBIO Magnolia biondii HOM05D000008 ORTHO05D003936 2.0e-07 60.1 174 28.7
SGA_v2.0_scaffold44G16720 Striga asiatica HOM05D000008 ORTHO05D003936 2.6e-07 59.7 146 31.5
Nitab4.5_0000080g0070 Nicotiana tabacum HOM05D000008 ORTHO05D003936 5.8e-07 58.5 123 38.2
Gohir.A08G099600 Gossypium hirsutum HOM05D000008 ORTHO05D003936 7.6e-07 58.2 122 33.6
Glyma.09G139000 Glycine max HOM05D000008 ORTHO05D003936 1.3e-06 57.4 167 27.5
Glyma.10G236600 Glycine max HOM05D000008 ORTHO05D003936 2.2e-06 56.6 116 35.3
TPR.G10739 Trifolium pratense HOM05D000008 ORTHO05D003936 2.2e-06 56.6 153 32.0
PGSC0003DMG400030012 Solanum tuberosum HOM05D000008 ORTHO05D396944 2.9e-06 56.2 161 35.4
Lalb_Chr01g0009301 Lupinus albus HOM05D000008 ORTHO05D003936 4.9e-06 55.5 176 28.4


User provided reference genes

Program Settings