Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049939 Camellia sinensis var. sinensis HOM05D006429 ORTHO05D008173 1.2e-121 439.9 220 100.0
Actinidia15677 Actinidia chinensis HOM05D006429 ORTHO05D008173 2.3e-77 292.7 218 72.0
Hma1.2p1_0007F.1_g004980 Hydrangea macrophylla HOM05D006429 ORTHO05D008173 1.6e-75 286.6 218 71.1
Hma1.2p1_0007F.1_g004990 Hydrangea macrophylla HOM05D006429 ORTHO05D008173 1.6e-75 286.6 218 71.1
Rhsim07G0157100 Rhododendron simsii HOM05D006429 ORTHO05D008173 8.2e-75 284.3 218 69.7
Dinv30158 Davidia involucrata HOM05D006429 ORTHO05D008173 2.4e-74 282.7 218 72.5
GSVIVG01035836001 Vitis vinifera HOM05D006429 ORTHO05D008173 1.4e-71 273.5 218 68.3
Cfa013165 Carpinus fangiana HOM05D006429 ORTHO05D008173 2.5e-71 272.7 220 67.3
Ciclev10008199m.g Citrus clementina HOM05D006429 ORTHO05D008173 5.5e-71 271.6 221 64.7
Nn8g39429 Nelumbo nucifera HOM05D006429 ORTHO05D008173 7.2e-71 271.2 221 64.7
TAR626G0443 Trochodendron aralioides HOM05D006429 ORTHO05D008173 1.6e-70 270.0 218 66.1
COL.COLO4_18834 Corchorus olitorius HOM05D006429 ORTHO05D008173 2.1e-70 269.6 218 66.1
Cpa.g.sc115.3 Carica papaya HOM05D006429 ORTHO05D008173 3.6e-70 268.9 218 67.0
Manes.03G016200 Manihot esculenta HOM05D006429 ORTHO05D008173 1.8e-69 266.5 220 67.3
Thecc.09G027300 Theobroma cacao HOM05D006429 ORTHO05D008173 1.8e-69 266.5 218 64.7
QL02p022136 Quercus lobata HOM05D006429 ORTHO05D008173 3.0e-69 265.8 219 68.0
Gorai.001G033000 Gossypium raimondii HOM05D006429 ORTHO05D008173 2.5e-68 262.7 218 63.8
Gohir.A07G027600 Gossypium hirsutum HOM05D006429 ORTHO05D008173 4.3e-68 261.9 218 63.3
Gohir.D07G031600 Gossypium hirsutum HOM05D006429 ORTHO05D008173 4.3e-68 261.9 218 63.8
CANSAT01G2886 Cannabis sativa HOM05D006429 ORTHO05D008173 8.2e-67 257.7 218 65.1
RcHm_v2.0_Chr6g0298181 Rosa chinensis HOM05D006429 ORTHO05D008173 1.4e-66 256.9 218 62.4
Prupe.1G479100 Prunus persica HOM05D006429 ORTHO05D008173 2.0e-65 253.1 218 61.9
Duzib187G0955 Durio zibethinus HOM05D006429 ORTHO05D008173 3.4e-65 252.3 218 63.8
CiPaw.08G012100 Carya illinoinensis HOM05D006429 ORTHO05D008173 4.5e-65 251.9 218 64.7
Cc08_g00870 Coffea canephora HOM05D006429 ORTHO05D008173 3.8e-64 248.8 222 60.8
PGR044G2505 Punica granatum HOM05D006429 ORTHO05D008173 2.5e-63 246.1 220 61.4
Eucgr.C02791 Eucalyptus grandis HOM05D006429 ORTHO05D008173 5.5e-63 245.0 174 67.8
PSO170G4475 Papaver somniferum HOM05D006429 ORTHO05D008173 5.5e-63 245.0 221 57.5
Aqoxy7G02159 Aquilegia oxysepala HOM05D006429 ORTHO05D008173 9.4e-63 244.2 176 69.9
Eucgr.C02795 Eucalyptus grandis HOM05D006429 ORTHO05D008173 1.6e-62 243.4 174 66.7
PSO455G0002 Papaver somniferum HOM05D006429 ORTHO05D008173 4.6e-62 241.9 221 57.0
Phvul.001G051900 Phaseolus vulgaris HOM05D006429 ORTHO05D008173 4.6e-62 241.9 218 60.1
FAN15G1390 Fragaria x ananassa HOM05D006429 ORTHO05D008173 7.9e-62 241.1 218 61.5
TWI32G0327 Tripterygium wilfordii HOM05D006429 ORTHO05D008173 3.0e-61 239.2 192 65.6
FAN27G0392 Fragaria x ananassa HOM05D006429 ORTHO05D008173 5.1e-61 238.4 218 61.0
FvH4_2g29360 Fragaria vesca HOM05D006429 ORTHO05D008173 6.7e-61 238.0 218 60.6
VMungo0647G0488 Vigna mungo HOM05D006429 ORTHO05D008173 1.1e-60 237.3 218 59.2
MD08G1148100 Malus domestica HOM05D006429 ORTHO05D008173 2.6e-60 236.1 219 56.6
FAN24G2390 Fragaria x ananassa HOM05D006429 ORTHO05D008173 9.7e-60 234.2 218 60.1
Solyc06g066090.3 Solanum lycopersicum HOM05D006429 ORTHO05D008173 2.2e-59 233.0 214 62.6
Migut.E01793 Erythranthe guttata HOM05D006429 ORTHO05D008173 2.8e-59 232.6 210 61.0
Sopen06g024570 Solanum pennellii HOM05D006429 ORTHO05D008173 8.2e-59 231.1 213 62.0
Ca_12935_v3 Cicer arietinum L. HOM05D006429 ORTHO05D008173 2.4e-58 229.6 174 66.7
ECA233G5545 Erigeron canadensis HOM05D006429 ORTHO05D008173 4.1e-58 228.8 178 65.2
Medtr1g012370 Medicago truncatula HOM05D006429 ORTHO05D008173 6.9e-58 228.0 190 62.1
Glyma.17G209600 Glycine max HOM05D006429 ORTHO05D008173 3.4e-57 225.7 218 58.3
TPR.G15678 Trifolium pratense HOM05D006429 ORTHO05D008173 3.4e-57 225.7 211 57.8
MSTRG.1719 Avicennia marina HOM05D006429 ORTHO05D008173 4.5e-57 225.3 208 58.2
Sc23g0006860 Simmondsia chinensis HOM05D006429 ORTHO05D008173 7.7e-57 224.6 219 57.5
DCAR_001526 Daucus carota HOM05D006429 ORTHO05D008173 2.2e-56 223.0 195 59.5
HanXRQChr13g0403421 Helianthus annuus HOM05D006429 ORTHO05D008173 5.0e-56 221.9 212 57.5
SGA_v2.0_scaffold163G37988 Striga asiatica HOM05D006429 ORTHO05D008173 6.5e-56 221.5 203 60.1
Lj5g0005549 Lotus japonicus HOM05D006429 ORTHO05D008173 1.1e-55 220.7 203 60.6
Psat6g029600 Pisum sativum HOM05D006429 ORTHO05D008173 1.4e-55 220.3 174 63.2
Sed0015882 Sechium edule HOM05D006429 ORTHO05D008173 1.9e-55 219.9 222 59.0
CsaV3_3G046490 Cucumis sativus L. HOM05D006429 ORTHO05D008173 2.5e-55 219.5 215 57.7
Sabra06G0197200 Salix brachista HOM05D006429 ORTHO05D008173 3.2e-55 219.2 209 57.4
MELO3C003691.2 Cucumis melo HOM05D006429 ORTHO05D008173 5.5e-55 218.4 215 57.2
Sp4g04810 Schrenkiella parvula HOM05D006429 ORTHO05D008173 2.1e-54 216.5 218 54.6
Hund04535 Selenicereus undatus HOM05D006429 ORTHO05D008173 3.6e-54 215.7 218 57.3
arahy.Tifrunner.gnm1.ann1.H48Z1Z Arachis hypogaea HOM05D006429 ORTHO05D008173 6.1e-54 214.9 241 51.0
Atru.chr7.2397 Acer truncatum HOM05D006429 ORTHO05D008173 1.8e-53 213.4 173 66.5
THA.LOC104803671 Tarenaya hassleriana HOM05D006429 ORTHO05D008173 5.2e-53 211.8 218 55.5
Ah.12g064110 Amaranthus hybridus HOM05D006429 ORTHO05D008173 7.4e-52 208.0 218 53.7
ATR0322G019 Amborella trichopoda HOM05D006429 ORTHO05D008173 7.4e-52 208.0 187 59.9
BraA09t40964Z Brassica rapa HOM05D006429 ORTHO05D008173 1.7e-51 206.8 218 51.4
arahy.Tifrunner.gnm1.ann1.DMN84V Arachis hypogaea HOM05D006429 ORTHO05D008173 4.8e-51 205.3 245 50.6
A09p55620 Brassica napus HOM05D006429 ORTHO05D008173 8.2e-51 204.5 218 50.9
C08p38620 Brassica napus HOM05D006429 ORTHO05D008173 1.4e-50 203.8 218 51.4
Thhalv10000103m.g Eutrema salsugineum HOM05D006429 ORTHO05D008173 1.4e-50 203.8 218 50.9
CARHR115890 Cardamine hirsuta HOM05D006429 ORTHO05D008173 4.1e-50 202.2 218 50.9
Potri.006G252300 Populus trichocarpa HOM05D006429 ORTHO05D008173 4.1e-50 202.2 222 54.5
HPP92_009845 Vanilla planifolia HOM05D006429 ORTHO05D008173 4.1e-50 202.2 173 58.4
AT2G25530 Arabidopsis thaliana HOM05D006429 ORTHO05D008173 5.3e-50 201.8 218 51.4
Os03g0851900 Oryza sativa ssp. japonica HOM05D006429 ORTHO05D008173 5.3e-50 201.8 174 58.0
AUR62024907 Chenopodium quinoa HOM05D006429 ORTHO05D008173 1.2e-49 200.7 218 52.3
AUR62030635 Chenopodium quinoa HOM05D006429 ORTHO05D008173 1.6e-49 200.3 218 52.3
BcaB08g35187 Brassica carinata HOM05D006429 ORTHO05D008173 2.0e-49 199.9 218 50.0
BcaC07g40864 Brassica carinata HOM05D006429 ORTHO05D008173 3.5e-49 199.1 218 51.4
BolC8t51433H Brassica oleracea HOM05D006429 ORTHO05D008173 3.5e-49 199.1 218 51.4
Carub.0004s0522 Capsella rubella HOM05D006429 ORTHO05D008173 7.7e-49 198.0 219 50.7
MBI01_g37798_MAGBIO Magnolia biondii HOM05D006429 ORTHO05D008173 1.7e-48 196.8 146 66.4
Peaxi162Scf00643g00324 Petunia axillaris HOM05D006429 ORTHO05D008173 2.9e-48 196.1 188 58.5
EL10Ac2g02614 Beta vulgaris HOM05D006429 ORTHO05D008173 6.5e-48 194.9 218 53.2
Aa31LG4G9870 Aethionema arabicum HOM05D006429 ORTHO05D008173 3.2e-47 192.6 242 45.9
Nitab4.5_0005761g0120 Nicotiana tabacum HOM05D006429 ORTHO05D008173 1.2e-46 190.7 177 61.6
Nitab4.5_0000109g0260 Nicotiana tabacum HOM05D006429 ORTHO05D008173 3.5e-41 172.6 132 68.9
FAN16G3505 Fragaria x ananassa HOM05D006429 ORTHO05D008173 5.5e-39 165.2 168 57.1
ClCG05G017010 Citrullus lanatus HOM05D006429 ORTHO05D008173 2.7e-38 162.9 204 50.0
SalBow1G3525 Salvia bowleyana HOM05D006429 ORTHO05D008173 8.8e-37 157.9 169 51.5
Lsat_1_v5_gn_6_22441 Lactuca sativa HOM05D006429 ORTHO05D008173 2.0e-36 156.8 131 61.1
Lalb_Chr24g0402221 Lupinus albus HOM05D006429 ORTHO05D008173 1.3e-35 154.1 131 60.3
PGSC0003DMG400020474 Solanum tuberosum HOM05D006429 ORTHO05D008173 1.3e-35 154.1 131 63.4
vmacro05185 Vaccinium macrocarpon HOM05D006429 ORTHO05D008173 1.4e-34 150.6 190 46.8
Zm00001eb064690 Zea mays HOM05D006429 ORTHO05D008173 7.0e-34 148.3 132 56.8
Pp3c7_12170 Physcomitrium patens HOM05D006429 ORTHO05D008173 3.1e-26 122.9 180 40.0
Mapoly0085s0040 Marchantia polymorpha HOM05D006429 ORTHO05D008173 1.9e-23 113.6 171 37.4
SMO228G0075 Selaginella moellendorffii HOM05D006429 ORTHO05D008173 3.3e-23 112.8 172 37.8
AagrBONN_evm.TU.Sc2ySwM_344.5555 Anthoceros agrestis HOM05D006429 ORTHO05D008173 5.6e-23 112.1 199 36.2
unitig_37.g12933 Utricularia gibba HOM05D006429 ORTHO05D008173 9.5e-23 111.3 93 59.1
Lj7A720G77 Lonicera japonica HOM05D006429 ORTHO05D008173 1.2e-20 104.4 70 72.9
SEGI_08944 Sequoiadendron giganteum HOM05D006429 ORTHO05D008173 1.5e-20 104.0 165 38.8
Haze_21537 Corylus avellana HOM05D006429 ORTHO05D008173 1.7e-19 100.5 69 72.5
AUR62032544 Chenopodium quinoa HOM05D006429 ORTHO05D008173 2.4e-18 96.7 79 60.8
SalBow1G7385 Salvia bowleyana HOM05D040611 ORTHO05D037502 2.7e-17 93.2 102 48.0
SEGI_20208 Sequoiadendron giganteum HOM05D006429 ORTHO05D008173 2.1e-14 83.6 77 53.2
RcHm_v2.0_Chr5g0072341 Rosa chinensis HOM05D006429 ORTHO05D345740 4.6e-09 65.9 89 43.8


User provided reference genes

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