Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049934 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 9.1e-31 136.3 73 100.0
CSS0001288 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 7.7e-30 133.3 73 98.6
Actinidia27284 Actinidia chinensis HOM05D000567 ORTHO05D000767 1.1e-23 112.8 73 83.6
Dinv18742 Davidia involucrata HOM05D006482 ORTHO05D008149 2.1e-19 98.6 67 76.1
Nitab4.5_0002720g0020 Nicotiana tabacum HOM05D006482 ORTHO05D008149 4.0e-18 94.4 71 67.6
Nitab4.5_0008141g0050 Nicotiana tabacum HOM05D006482 ORTHO05D008149 5.2e-18 94.0 72 68.1
GSVIVG01038627001 Vitis vinifera HOM05D006482 ORTHO05D008149 5.2e-18 94.0 73 69.9
CSS0017170 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 8.9e-18 93.2 73 68.5
Rhsim03G0214200 Rhododendron simsii HOM05D006482 ORTHO05D008149 1.5e-17 92.4 73 67.1
vmacro06428 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 2.6e-17 91.7 73 64.4
TAR374G1512 Trochodendron aralioides HOM05D006482 ORTHO05D008149 3.4e-17 91.3 73 68.5
TAR629G1047 Trochodendron aralioides HOM05D006482 ORTHO05D008149 4.4e-17 90.9 73 69.9
Nn3g18841 Nelumbo nucifera HOM05D006482 ORTHO05D008149 5.7e-17 90.5 73 68.5
Oeu010737.1 Olea europaea HOM05D006482 ORTHO05D008149 7.5e-17 90.1 73 65.8
Hma1.2p1_0456F.1_g156710 Hydrangea macrophylla HOM05D006482 ORTHO05D008149 1.3e-16 89.4 73 65.8
PGR142G0199 Punica granatum HOM05D006482 ORTHO05D008149 1.7e-16 89.0 73 65.8
PGSC0003DMG400012236 Solanum tuberosum HOM05D006482 ORTHO05D008149 2.2e-16 88.6 73 65.8
Sopen08g031390 Solanum pennellii HOM05D006482 ORTHO05D008149 4.9e-16 87.4 73 64.4
Solyc08g083200.3 Solanum lycopersicum HOM05D006482 ORTHO05D008149 6.3e-16 87.0 73 64.4
Dinv29224 Davidia involucrata HOM05D006482 ORTHO05D008149 8.3e-16 86.7 65 67.7
Lj1g0026941 Lotus japonicus HOM05D006482 ORTHO05D008149 8.3e-16 86.7 73 65.8
Prupe.2G317400 Prunus persica HOM05D006482 ORTHO05D008149 1.1e-15 86.3 73 63.0
Glyma.04G230700 Glycine max HOM05D006482 ORTHO05D008149 1.4e-15 85.9 73 61.6
EL10Ac3g05199 Beta vulgaris HOM05D006482 ORTHO05D008149 2.4e-15 85.1 73 65.8
ECA233G2670 Erigeron canadensis HOM05D006482 ORTHO05D008149 2.4e-15 85.1 73 65.8
QL05p036199 Quercus lobata HOM05D006482 ORTHO05D008149 2.4e-15 85.1 72 63.9
RcHm_v2.0_Chr1g0382671 Rosa chinensis HOM05D006482 ORTHO05D008149 2.4e-15 85.1 73 63.0
Peaxi162Scf00074g00224 Petunia axillaris HOM05D006482 ORTHO05D008149 3.2e-15 84.7 73 64.4
CANSAT21G0227 Cannabis sativa HOM05D006482 ORTHO05D008149 4.1e-15 84.3 73 61.6
Lsat_1_v5_gn_6_10060 Lactuca sativa HOM05D006482 ORTHO05D008149 4.1e-15 84.3 73 64.4
MD01G1227400 Malus domestica HOM05D006482 ORTHO05D008149 4.1e-15 84.3 73 63.0
Manes.01G041500 Manihot esculenta HOM05D006482 ORTHO05D008149 4.1e-15 84.3 73 63.0
Phvul.009G047100 Phaseolus vulgaris HOM05D006482 ORTHO05D008149 4.1e-15 84.3 73 64.4
Psat5g073480 Pisum sativum HOM05D006482 ORTHO05D008149 4.1e-15 84.3 73 63.0
Atru.chr12.2369 Acer truncatum HOM05D006482 ORTHO05D008149 5.4e-15 84.0 73 65.8
PSO063G1999 Papaver somniferum HOM05D006482 ORTHO05D008149 5.4e-15 84.0 73 61.6
FvH4_7g32700 Fragaria vesca HOM05D006482 ORTHO05D008149 9.2e-15 83.2 73 60.3
FAN01G3112 Fragaria x ananassa HOM05D006482 ORTHO05D008149 9.2e-15 83.2 73 60.3
FAN03G2872 Fragaria x ananassa HOM05D006482 ORTHO05D008149 9.2e-15 83.2 73 60.3
Migut.E00300 Erythranthe guttata HOM05D006482 ORTHO05D008149 1.2e-14 82.8 74 64.9
Lalb_Chr11g0067291 Lupinus albus HOM05D006482 ORTHO05D008149 1.6e-14 82.4 72 61.1
arahy.Tifrunner.gnm1.ann1.ZIU4UI Arachis hypogaea HOM05D006482 ORTHO05D008149 2.0e-14 82.0 73 60.3
Ciclev10023193m.g Citrus clementina HOM05D006482 ORTHO05D008149 2.0e-14 82.0 73 61.6
Eucgr.K00422 Eucalyptus grandis HOM05D006482 ORTHO05D008149 2.0e-14 82.0 73 61.6
unitig_699.g19497 Utricularia gibba HOM05D006482 ORTHO05D008149 2.0e-14 82.0 70 60.0
CDE09G1364 Ceratophyllum demersum HOM05D001294 ORTHO05D001178 2.7e-14 81.6 71 60.6
arahy.Tifrunner.gnm1.ann1.CVH3M3 Arachis hypogaea HOM05D006482 ORTHO05D008149 3.5e-14 81.3 73 60.3
HanXRQChr07g0192381 Helianthus annuus HOM05D006482 ORTHO05D008149 3.5e-14 81.3 73 64.4
Ah.13g070630 Amaranthus hybridus HOM05D006482 ORTHO05D008149 4.6e-14 80.9 74 64.9
SalBow3G2365 Salvia bowleyana HOM05D006482 ORTHO05D008149 4.6e-14 80.9 74 63.5
TWI39G0373 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 4.6e-14 80.9 73 60.3
Hund21041 Selenicereus undatus HOM05D006482 ORTHO05D008149 7.8e-14 80.1 67 67.2
Sed0025475 Sechium edule HOM05D006482 ORTHO05D008149 1.0e-13 79.7 73 56.2
Medtr3g092270 Medicago truncatula HOM05D006482 ORTHO05D008149 1.7e-13 79.0 66 63.6
Potri.012G022900 Populus trichocarpa HOM05D006482 ORTHO05D008149 2.3e-13 78.6 73 61.6
Thecc.03G206900 Theobroma cacao HOM05D006482 ORTHO05D008149 2.3e-13 78.6 73 60.3
COL.COLO4_14353 Corchorus olitorius HOM05D006482 ORTHO05D008149 3.9e-13 77.8 73 58.9
Glyma.04G154600 Glycine max HOM05D006482 ORTHO05D008149 3.9e-13 77.8 69 60.9
Potri.015G006500 Populus trichocarpa HOM05D006482 ORTHO05D008149 3.9e-13 77.8 73 60.3
TWI14G0741 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 3.9e-13 77.8 66 62.1
Cc08_g16820 Coffea canephora HOM05D006482 ORTHO05D008149 5.0e-13 77.4 70 58.6
TPR.G14847 Trifolium pratense HOM05D006482 ORTHO05D008149 6.6e-13 77.0 65 61.5
Gohir.A08G103900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 8.6e-13 76.6 73 58.9
CiPaw.05G203100 Carya illinoinensis HOM05D006482 ORTHO05D008149 1.1e-12 76.3 73 58.9
AL8G28600 Arabidopsis lyrata HOM05D006482 ORTHO05D008149 1.5e-12 75.9 73 60.3
Sabra15G0004500 Salix brachista HOM05D006482 ORTHO05D008149 1.5e-12 75.9 73 58.9
CsaV3_5G000030 Cucumis sativus L. HOM05D006482 ORTHO05D008149 1.9e-12 75.5 73 56.2
Carub.0008s1398 Capsella rubella HOM05D006482 ORTHO05D008149 2.5e-12 75.1 73 60.3
Duzib205G0332 Durio zibethinus HOM05D006482 ORTHO05D008149 2.5e-12 75.1 73 56.2
Gohir.D08G115300 Gossypium hirsutum HOM05D006482 ORTHO05D008149 2.5e-12 75.1 73 57.5
Gorai.004G124200 Gossypium raimondii HOM05D006482 ORTHO05D008149 2.5e-12 75.1 73 57.5
Hund09702 Selenicereus undatus HOM05D006482 ORTHO05D008149 2.5e-12 75.1 73 58.9
MELO3C005924.2 Cucumis melo HOM05D006482 ORTHO05D008149 3.3e-12 74.7 73 54.8
AT5G53650 Arabidopsis thaliana HOM05D006482 ORTHO05D008149 4.3e-12 74.3 73 60.3
ClCG01G000130 Citrullus lanatus HOM05D006482 ORTHO05D008149 5.6e-12 73.9 73 52.1
Thhalv10015198m.g Eutrema salsugineum HOM05D006482 ORTHO05D008149 5.6e-12 73.9 73 58.9
Lalb_Chr23g0271851 Lupinus albus HOM05D006482 ORTHO05D008149 5.6e-12 73.9 73 57.5
Sp6g15770 Schrenkiella parvula HOM05D006482 ORTHO05D008149 5.6e-12 73.9 73 58.9
Aa31LG3G9780 Aethionema arabicum HOM05D006482 ORTHO05D008149 9.5e-12 73.2 73 57.5
A03p15030 Brassica napus HOM05D006482 ORTHO05D008149 9.5e-12 73.2 71 59.2
C03p17520 Brassica napus HOM05D006482 ORTHO05D008149 9.5e-12 73.2 71 59.2
BolC3t14165H Brassica oleracea HOM05D006482 ORTHO05D008149 9.5e-12 73.2 71 59.2
BraA03t10797Z Brassica rapa HOM05D006482 ORTHO05D008149 9.5e-12 73.2 71 59.2
CARHR266810 Cardamine hirsuta HOM05D006482 ORTHO05D008149 1.2e-11 72.8 73 58.9
BcaC01g06263 Brassica carinata HOM05D006482 ORTHO05D008149 1.6e-11 72.4 71 59.2
A02p10930 Brassica napus HOM05D006482 ORTHO05D008149 2.1e-11 72.0 71 57.7
BcaB01g04252 Brassica carinata HOM05D006482 ORTHO05D008149 2.8e-11 71.6 71 57.7
Sc19g0000660 Simmondsia chinensis HOM05D006482 ORTHO05D008149 2.8e-11 71.6 67 62.7
BraA02t06158Z Brassica rapa HOM05D006482 ORTHO05D008149 3.6e-11 71.2 71 57.7
Glyma.06G134500 Glycine max HOM05D006482 ORTHO05D008149 3.6e-11 71.2 73 54.8
Gorai.008G265700 Gossypium raimondii HOM05D006482 ORTHO05D008149 3.6e-11 71.2 73 54.8
Sc13g0010170 Simmondsia chinensis HOM05D006482 ORTHO05D008149 4.7e-11 70.9 73 54.8
BcaB05g22064 Brassica carinata HOM05D006482 ORTHO05D008149 6.1e-11 70.5 71 57.7
MD07G1297700 Malus domestica HOM05D006482 ORTHO05D008149 8.0e-11 70.1 99 46.5
BcaC03g14399 Brassica carinata HOM05D006482 ORTHO05D008149 1.4e-10 69.3 71 56.3
C02p18140 Brassica napus HOM05D006482 ORTHO05D008149 1.4e-10 69.3 71 56.3
BolC2t07944H Brassica oleracea HOM05D006482 ORTHO05D008149 1.4e-10 69.3 71 56.3
THA.LOC109117152 Tarenaya hassleriana HOM05D006482 ORTHO05D008149 1.8e-10 68.9 69 55.1
Sed0001965 Sechium edule HOM05D006482 ORTHO05D008149 2.3e-10 68.6 69 52.2
Duzib068G1219 Durio zibethinus HOM05D006482 ORTHO05D008149 5.2e-10 67.4 88 47.7
SEGI_31465 Sequoiadendron giganteum HOM05D006482 ORTHO05D008149 5.2e-10 67.4 61 59.0
AUR62035606 Chenopodium quinoa HOM05D006482 ORTHO05D008149 8.9e-10 66.6 96 47.9
Gohir.A12G246900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 8.9e-10 66.6 73 50.7
Rhsim07G0077300 Rhododendron simsii HOM05D006482 ORTHO05D008149 1.2e-09 66.2 42 76.2
CiPaw.06G042200 Carya illinoinensis HOM05D006482 ORTHO05D008149 3.4e-09 64.7 73 47.9
vmacro13845 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 4.4e-09 64.3 45 71.1
CDE11G0870 Ceratophyllum demersum HOM05D006482 ORTHO05D008149 7.5e-09 63.5 105 40.0
Eucgr.E02459 Eucalyptus grandis HOM05D006482 ORTHO05D008149 3.2e-07 58.2 70 50.0
Duzib084G1447 Durio zibethinus HOM05D006482 ORTHO05D008149 5.4e-07 57.4 63 50.8
CSS0007382 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 7.0e-07 57.0 72 51.4
Os05g0535700 Oryza sativa ssp. japonica HOM05D006482 ORTHO05D008149 9.2e-07 56.6 70 47.1
AUR62006020 Chenopodium quinoa HOM05D006482 ORTHO05D008149 2.7e-06 55.1 42 66.7
DCAR_006554 Daucus carota HOM05D006482 ORTHO05D008149 2.7e-06 55.1 39 69.2
CSS0015195 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 3.5e-06 54.7 58 55.2
Gohir.D12G247600 Gossypium hirsutum HOM05D006482 ORTHO05D008149 3.5e-06 54.7 73 47.9
HPP92_020659 Vanilla planifolia HOM05D001695 ORTHO05D002735 3.5e-06 54.7 67 47.8
FAN17G0467 Fragaria x ananassa HOM05D006482 ORTHO05D008149 4.6e-06 54.3 41 63.4
QL09p007382 Quercus lobata HOM05D006482 ORTHO05D008149 6.0e-06 53.9 142 32.4


User provided reference genes

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