Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 0.0e+00 1078.2 589 100.0
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 7.0e-190 667.9 497 77.9
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 6.0e-189 664.8 495 77.4
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 7.5e-184 647.9 530 73.6
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 3.1e-177 625.9 489 74.0
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 1.2e-176 624.0 548 70.1
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 3.7e-175 619.0 487 75.6
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 1.1e-171 607.4 513 70.4
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 1.9e-171 606.7 493 73.2
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 1.2e-170 604.0 491 73.5
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 2.8e-170 602.8 486 72.8
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 1.1e-169 600.9 489 73.8
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 4.0e-169 599.0 485 71.8
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 1.5e-168 597.0 496 72.6
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 3.4e-168 595.9 522 69.0
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 8.4e-167 591.3 486 72.8
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 1.1e-166 590.9 488 73.0
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 2.4e-166 589.7 497 71.4
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 3.2e-166 589.3 494 72.3
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 7.1e-166 588.2 485 72.8
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 2.7e-165 586.3 488 72.5
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 4.6e-165 585.5 564 65.1
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 1.3e-164 583.9 481 71.1
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 2.3e-164 583.2 487 71.5
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 6.6e-164 581.6 497 70.8
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 1.9e-163 580.1 485 69.9
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 5.6e-163 578.6 508 68.5
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 9.6e-163 577.8 498 69.9
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 1.5e-160 570.5 490 69.2
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 5.8e-160 568.5 494 69.4
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 9.9e-160 567.8 549 65.0
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 2.2e-159 566.6 452 71.7
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 6.4e-159 565.1 483 68.7
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 6.4e-159 565.1 497 68.8
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 1.1e-158 564.3 491 69.2
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 3.2e-158 562.8 487 69.0
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 7.1e-158 561.6 483 68.5
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 7.8e-157 558.1 496 69.0
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 1.7e-156 557.0 454 72.7
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 8.7e-156 554.7 452 70.6
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 1.1e-155 554.3 452 70.8
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 3.3e-155 552.7 497 68.2
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 7.3e-155 551.6 533 64.7
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 1.3e-154 550.8 488 70.7
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 2.8e-154 549.7 490 68.8
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 3.6e-154 549.3 483 70.6
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 6.2e-154 548.5 487 69.4
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 1.1e-153 547.7 486 68.5
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 6.9e-153 545.0 511 65.6
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 9.0e-153 544.7 509 68.2
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 1.2e-152 544.3 486 67.3
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 2.0e-152 543.5 491 68.0
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 2.6e-152 543.1 502 66.1
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 2.6e-152 543.1 490 66.7
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 4.5e-152 542.3 576 60.4
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 1.3e-151 540.8 505 65.1
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 2.2e-151 540.0 488 67.2
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 2.2e-151 540.0 483 66.5
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 2.4e-150 536.6 448 71.2
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 1.6e-149 533.9 492 66.9
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 3.5e-149 532.7 451 71.6
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 1.8e-148 530.4 451 72.1
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 2.3e-148 530.0 577 62.2
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 3.9e-148 529.3 485 66.4
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 3.9e-148 529.3 487 66.9
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 3.9e-148 529.3 490 66.9
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 5.6e-147 525.4 504 63.7
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 5.6e-147 525.4 453 69.3
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 1.3e-146 524.2 491 65.0
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 8.1e-146 521.5 481 66.5
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 7.6e-144 515.0 540 61.3
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 1.1e-142 511.1 485 67.0
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 4.2e-142 509.2 486 64.4
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 5.5e-142 508.8 495 62.0
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 2.7e-141 506.5 449 68.8
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 4.8e-138 495.7 451 68.7
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 3.4e-136 489.6 489 62.6
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 3.4e-136 489.6 461 64.4
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 1.0e-132 478.0 375 73.6
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 1.0e-132 478.0 512 58.6
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.3e-132 476.9 469 62.7
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 3.1e-129 466.5 376 70.7
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 6.9e-129 465.3 378 72.2
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 1.2e-128 464.5 452 62.4
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 3.4e-128 463.0 490 61.2
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 4.6e-125 452.6 377 69.8
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.8e-122 443.4 389 66.8
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 1.6e-117 427.6 497 54.3
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 1.6e-117 427.6 508 58.3
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.3e-114 417.9 392 64.5
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 5.3e-113 412.5 448 61.4
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 1.8e-108 397.5 472 54.0
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 9.7e-107 391.7 466 59.4
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 1.3e-106 391.3 355 71.8
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 1.9e-102 377.5 284 78.2
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 1.8e-100 370.9 384 63.0
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 8.8e-100 368.6 379 63.6
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 1.2e-99 368.2 343 68.8
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 1.5e-94 351.3 470 50.0
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 1.0e-92 345.1 348 62.9
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 3.0e-92 343.6 337 65.6
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 1.7e-87 327.8 309 67.3
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 1.4e-81 308.1 312 65.7
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 6.6e-79 299.3 536 47.0
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.6e-75 287.3 379 57.8
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 1.3e-74 285.0 344 58.7
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 1.6e-72 278.1 311 61.7
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 3.0e-71 273.9 311 61.1
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 3.9e-71 273.5 536 43.1
Sopen02g035470 Solanum pennellii HOM05D005490 ORTHO05D006606 6.4e-66 256.1 244 65.6
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 7.3e-62 242.7 335 55.2
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 9.5e-62 242.3 279 58.1
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 1.2e-56 225.3 244 54.9
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 1.5e-54 218.4 125 84.0
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 2.5e-54 217.6 491 44.2
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 1.6e-53 214.9 154 68.8
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 5.2e-52 209.9 123 82.9
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 8.9e-52 209.1 355 45.9
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 4.3e-46 190.3 125 76.8
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 4.9e-42 176.8 212 58.5
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.4e-36 157.9 84 90.5
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 1.3e-34 152.1 474 30.6
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 3.3e-30 137.5 158 53.2
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 5.6e-30 136.7 121 67.8
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 1.4e-28 132.1 110 74.5
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 3.2e-25 120.9 140 53.6
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 9.3e-25 119.4 282 34.0
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.4e-20 105.5 72 70.8
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.4e-20 104.8 78 80.8
TAR381G1012 Trochodendron aralioides HOM05D005490 ORTHO05D006606 2.6e-19 101.3 79 79.7
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 4.5e-19 100.5 66 74.2
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 5.8e-19 100.1 381 32.0
VMungo1309G1585 Vigna mungo HOM05D005490 ORTHO05D006606 8.7e-15 86.3 86 58.1
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.9e-14 85.1 64 68.8
VMungo0251G2361 Vigna mungo HOM05D007793 ORTHO05D010104 1.1e-12 79.3 140 45.0
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 3.1e-12 77.8 50 76.0
Actinidia12052 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.9e-10 71.2 161 39.8
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 8.8e-07 59.7 163 30.7
ECA233G0248 Erigeron canadensis HOM05D000047 ORTHO05D006606 9.7e-06 56.2 130 39.2


User provided reference genes

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