Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033258 Camellia sinensis var. sinensis HOM05D049645 ORTHO05D110023 1.6e-65 252.7 131 100.0
CSS0049922 Camellia sinensis var. sinensis HOM05D049645 ORTHO05D110547 1.6e-65 252.7 131 100.0
BcaB01g01091 Brassica carinata HOM05D001528 ORTHO05D002760 9.7e-07 57.4 35 82.9
BcaC01g01974 Brassica carinata HOM05D001528 ORTHO05D002760 2.2e-06 56.2 35 80.0
A06p21480 Brassica napus HOM05D001528 ORTHO05D002760 2.2e-06 56.2 35 80.0
C03p69900 Brassica napus HOM05D001528 ORTHO05D002760 2.2e-06 56.2 35 80.0
BolC3t19251H Brassica oleracea HOM05D001528 ORTHO05D002760 2.2e-06 56.2 35 80.0
BraA06t25231Z Brassica rapa HOM05D001528 ORTHO05D002760 2.2e-06 56.2 35 80.0
Sp5g16000 Schrenkiella parvula HOM05D001528 ORTHO05D002760 2.2e-06 56.2 35 80.0
AL5G23910 Arabidopsis lyrata HOM05D001528 ORTHO05D002760 3.7e-06 55.5 35 80.0
Atru.chr3.3682 Acer truncatum HOM05D001528 ORTHO05D002760 6.3e-06 54.7 35 77.1
CSS0044348 Camellia sinensis var. sinensis HOM05D001528 ORTHO05D002760 6.3e-06 54.7 35 77.1
Carub.0005s1118 Capsella rubella HOM05D001528 ORTHO05D002760 6.3e-06 54.7 35 77.1
CARHR150570 Cardamine hirsuta HOM05D001528 ORTHO05D002760 6.3e-06 54.7 35 77.1
Dinv06399 Davidia involucrata HOM05D001528 ORTHO05D002760 6.3e-06 54.7 35 77.1
Dinv32778 Davidia involucrata HOM05D001528 ORTHO05D002760 6.3e-06 54.7 35 77.1
Thhalv10002397m.g Eutrema salsugineum HOM05D001528 ORTHO05D002760 6.3e-06 54.7 35 77.1
FvH4_3g32990 Fragaria vesca HOM05D001528 ORTHO05D002760 6.3e-06 54.7 35 77.1
FAN21G1847 Fragaria x ananassa HOM05D001528 ORTHO05D002760 6.3e-06 54.7 35 77.1
FAN25G2987 Fragaria x ananassa HOM05D001528 ORTHO05D002760 6.3e-06 54.7 35 77.1
Hma1.2p1_0568F.1_g180120 Hydrangea macrophylla HOM05D001528 ORTHO05D002760 6.3e-06 54.7 35 77.1
MD03G1112700 Malus domestica HOM05D001528 ORTHO05D002760 6.3e-06 54.7 35 77.1
MD11G1131700 Malus domestica HOM05D001528 ORTHO05D002760 6.3e-06 54.7 35 77.1
RcHm_v2.0_Chr5g0060321 Rosa chinensis HOM05D001528 ORTHO05D002760 6.3e-06 54.7 35 77.1
arahy.Tifrunner.gnm1.ann1.66AXQW Arachis hypogaea HOM05D001528 ORTHO05D002760 8.2e-06 54.3 35 77.1
CSS0039044 Camellia sinensis var. sinensis HOM05D001528 ORTHO05D002760 8.2e-06 54.3 35 74.3
Lalb_Chr22g0350201 Lupinus albus HOM05D001528 ORTHO05D002760 8.2e-06 54.3 35 77.1
Lalb_Chr24g0394471 Lupinus albus HOM05D001528 ORTHO05D002760 8.2e-06 54.3 35 77.1


User provided reference genes

Program Settings