Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049920 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D024696 1.7e-19 99.0 77 100.0
CSS0041307 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D024696 2.9e-19 98.2 77 98.7
CSS0046936 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D024696 2.5e-18 95.1 77 98.7
CSS0035762 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.9e-10 68.9 79 64.6
Dinv12424 Davidia involucrata HOM05D002160 ORTHO05D002012 5.5e-10 67.4 79 65.8
CSS0001348 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 3.6e-09 64.7 79 62.0
CSS0041171 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 7.9e-09 63.5 58 79.3
CSS0041767 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 7.9e-09 63.5 57 73.7
Dinv17000 Davidia involucrata HOM05D002160 ORTHO05D002012 7.9e-09 63.5 79 63.3
Dinv42949 Davidia involucrata HOM05D002160 ORTHO05D002012 7.9e-09 63.5 79 63.3
Dinv43151 Davidia involucrata HOM05D002160 ORTHO05D002012 7.9e-09 63.5 79 63.3
CSS0020810 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 3.0e-08 61.6 58 77.6
Hma1.2p1_0418F.1_g149100 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 6.7e-08 60.5 79 59.5
Hma1.2p1_0035F.1_g022400 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 2.6e-07 58.5 80 57.5
Migut.D02103 Erythranthe guttata HOM05D022828 ORTHO05D002012 3.3e-07 58.2 54 77.8
Manes.07G091300 Manihot esculenta HOM05D002160 ORTHO05D002012 3.3e-07 58.2 78 71.8
Manes.01G174400 Manihot esculenta HOM05D002160 ORTHO05D002012 4.4e-07 57.8 78 70.5
Hma1.2p1_0418F.1_g149080 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 5.7e-07 57.4 80 60.0
Manes.01G174200 Manihot esculenta HOM05D002160 ORTHO05D002012 5.7e-07 57.4 78 70.5
Migut.D02104 Erythranthe guttata HOM05D022828 ORTHO05D002012 1.7e-06 55.8 54 75.9
Cc10_g08840 Coffea canephora HOM05D002160 ORTHO05D024696 2.8e-06 55.1 74 73.0
Rhsim13G0082700 Rhododendron simsii HOM05D002160 ORTHO05D002012 2.8e-06 55.1 57 70.2
Cc01_g12850 Coffea canephora HOM05D002160 ORTHO05D002012 4.8e-06 54.3 55 50.9
Cc10_g08850 Coffea canephora HOM05D002160 ORTHO05D024696 8.2e-06 53.5 77 58.4


User provided reference genes

Program Settings