Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 4.5e-80 301.2 154 100.0
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.3e-74 283.1 154 94.2
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.0e-71 273.5 140 100.0
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 6.8e-52 207.6 141 82.3
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 3.7e-50 201.8 141 78.0
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 2.3e-47 192.6 140 70.7
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 6.2e-45 184.5 151 64.9
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 3.4e-43 178.7 138 67.4
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 5.8e-43 177.9 142 64.8
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 1.3e-42 176.8 142 65.5
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 1.3e-42 176.8 138 65.9
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 2.2e-42 176.0 137 61.3
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 6.4e-42 174.5 115 74.8
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 2.4e-41 172.6 107 80.4
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 9.2e-41 170.6 147 63.3
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 3.5e-40 168.7 151 60.3
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 4.6e-40 168.3 138 64.5
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 6.0e-40 167.9 109 77.1
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 6.0e-40 167.9 138 64.5
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 6.0e-40 167.9 143 63.6
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 7.8e-40 167.5 141 63.1
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 7.8e-40 167.5 159 57.9
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 7.8e-40 167.5 147 61.2
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 1.0e-39 167.2 140 62.1
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 2.3e-39 166.0 109 76.1
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 2.3e-39 166.0 147 61.2
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 2.3e-39 166.0 105 76.2
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 3.0e-39 165.6 151 60.3
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 3.9e-39 165.2 140 62.1
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 8.6e-39 164.1 106 73.6
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 1.1e-38 163.7 152 60.5
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 1.5e-38 163.3 122 68.9
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 1.9e-38 162.9 98 76.5
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 1.9e-38 162.9 105 74.3
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 1.9e-38 162.9 140 62.1
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 2.5e-38 162.5 139 58.3
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 2.5e-38 162.5 148 62.2
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 2.5e-38 162.5 158 56.3
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 2.5e-38 162.5 143 58.0
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 4.3e-38 161.8 143 58.7
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 5.6e-38 161.4 146 60.3
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 7.3e-38 161.0 146 58.9
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 7.3e-38 161.0 95 77.9
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 9.5e-38 160.6 144 60.4
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 1.6e-37 159.8 104 73.1
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 2.1e-37 159.5 144 59.0
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 3.6e-37 158.7 131 61.1
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 3.6e-37 158.7 149 60.4
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 6.2e-37 157.9 107 69.2
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 8.1e-37 157.5 147 59.2
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 1.1e-36 157.1 143 58.7
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 3.1e-36 155.6 108 67.6
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 4.0e-36 155.2 114 64.9
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 4.0e-36 155.2 101 71.3
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 1.2e-35 153.7 151 57.0
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 1.5e-35 153.3 150 56.7
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 2.0e-35 152.9 127 63.0
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 3.4e-35 152.1 105 70.5
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 4.4e-35 151.8 144 55.6
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 5.8e-35 151.4 104 69.2
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 5.8e-35 151.4 142 56.3
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 5.8e-35 151.4 101 70.3
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 9.9e-35 150.6 109 67.9
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 6.4e-34 147.9 162 52.5
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 6.4e-34 147.9 98 69.4
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 1.9e-33 146.4 140 55.7
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 2.4e-33 146.0 104 66.3
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 2.4e-33 146.0 146 54.1
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 3.2e-33 145.6 107 66.4
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 4.1e-33 145.2 146 53.4
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.6e-32 143.3 114 64.9
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 1.6e-32 143.3 97 70.1
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 2.1e-32 142.9 154 52.6
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 2.1e-32 142.9 134 57.5
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 2.7e-32 142.5 138 55.1
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 2.7e-32 142.5 110 62.7
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 3.5e-32 142.1 109 67.0
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 3.5e-32 142.1 107 61.7
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 3.5e-32 142.1 145 53.1
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 6.0e-32 141.4 143 51.0
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 6.0e-32 141.4 96 71.9
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 1.7e-31 139.8 146 50.7
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 1.7e-31 139.8 146 50.0
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 1.7e-31 139.8 144 50.7
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 2.3e-31 139.4 140 52.9
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 3.0e-31 139.0 138 50.7
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 6.6e-31 137.9 98 64.3
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 6.6e-31 137.9 98 64.3
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 6.6e-31 137.9 146 49.3
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 6.6e-31 137.9 110 61.8
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 6.6e-31 137.9 138 51.4
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 6.6e-31 137.9 97 69.1
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 1.1e-30 137.1 150 49.3
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 2.5e-30 136.0 182 44.5
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 3.3e-30 135.6 110 59.1
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 3.3e-30 135.6 150 49.3
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 9.6e-30 134.0 145 49.7
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 1.2e-29 133.7 159 48.4
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 1.2e-29 133.7 97 66.0
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 4.7e-29 131.7 108 56.5
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 1.8e-28 129.8 149 47.0
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 1.5e-27 126.7 174 42.0
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 7.6e-27 124.4 105 58.1
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 4.2e-25 118.6 80 71.2
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 1.2e-24 117.1 207 37.7
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 3.5e-24 115.5 117 55.6
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 8.7e-23 110.9 150 46.7
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 8.7e-23 110.9 104 56.7
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 2.5e-22 109.4 61 85.2
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 2.4e-20 102.8 55 89.1
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 4.0e-20 102.1 74 63.5
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 6.9e-20 101.3 113 55.8
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 1.3e-18 97.1 104 48.1
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 4.9e-18 95.1 101 48.5
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 7.1e-17 91.3 132 38.6
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 4.6e-16 88.6 96 47.9
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 3.0e-15 85.9 94 56.4
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 4.3e-14 82.0 92 41.3
Actinidia14692 Actinidia chinensis HOM05D001428 ORTHO05D001306 5.3e-12 75.1 146 44.5
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 1.2e-11 73.9 42 78.6
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 6.4e-10 68.2 95 38.9
MBI13_g38674_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 1.3e-07 60.5 104 37.5
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 1.1e-06 57.4 92 31.5


User provided reference genes

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