Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.0e-110 402.5 214 100.0
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.9e-97 359.4 196 92.3
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.4e-97 357.5 196 91.8
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 2.9e-93 345.5 196 86.7
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 8.4e-93 344.0 196 86.7
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 1.2e-91 340.1 196 86.2
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 1.5e-89 333.2 196 83.7
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 1.4e-87 326.6 196 81.1
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 5.3e-87 324.7 196 81.1
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 5.3e-87 324.7 190 84.2
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 5.3e-87 324.7 196 81.1
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 9.0e-87 323.9 196 82.1
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 9.0e-87 323.9 196 81.6
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 2.6e-86 322.4 196 81.1
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 2.6e-86 322.4 196 80.6
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 7.7e-86 320.9 196 79.1
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 7.7e-86 320.9 196 79.1
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 1.3e-85 320.1 196 80.1
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 1.7e-85 319.7 196 79.1
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 1.7e-85 319.7 196 80.1
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.7e-85 319.7 196 81.1
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.7e-85 319.7 196 78.6
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 1.7e-85 319.7 196 80.6
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 2.9e-85 318.9 196 78.6
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 2.9e-85 318.9 196 78.6
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 5.0e-85 318.2 191 80.6
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 6.5e-85 317.8 196 78.1
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 8.5e-85 317.4 196 78.6
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 1.1e-84 317.0 196 79.1
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.1e-84 317.0 192 81.2
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 1.1e-84 317.0 192 81.2
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 1.4e-84 316.6 196 80.1
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 1.9e-84 316.2 196 80.1
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 1.9e-84 316.2 196 79.6
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 2.5e-84 315.8 196 77.6
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 3.2e-84 315.5 196 76.0
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 3.2e-84 315.5 196 80.1
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 5.5e-84 314.7 196 76.5
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 7.2e-84 314.3 196 78.6
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 2.7e-83 312.4 196 79.6
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 6.1e-83 311.2 196 78.1
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 7.9e-83 310.8 196 78.6
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 1.4e-82 310.1 196 77.6
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 3.0e-82 308.9 196 76.5
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 3.9e-82 308.5 196 76.0
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 3.9e-82 308.5 196 76.0
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 5.1e-82 308.1 194 77.3
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 5.1e-82 308.1 196 76.0
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 6.7e-82 307.8 196 76.0
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 8.8e-82 307.4 196 76.5
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 1.1e-81 307.0 196 76.0
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 1.1e-81 307.0 196 76.0
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 1.1e-81 307.0 196 77.0
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 1.1e-81 307.0 196 76.5
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 1.5e-81 306.6 196 76.5
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 1.5e-81 306.6 196 76.0
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 2.0e-81 306.2 196 77.0
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 2.5e-81 305.8 196 75.5
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 4.3e-81 305.1 196 76.0
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 5.7e-81 304.7 196 76.0
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 9.7e-81 303.9 196 76.0
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 9.7e-81 303.9 196 76.0
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 9.7e-81 303.9 196 75.0
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.3e-80 303.5 196 75.0
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 1.7e-80 303.1 196 76.0
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 4.8e-80 301.6 196 75.0
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 8.2e-80 300.8 196 74.5
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 1.4e-79 300.1 196 75.5
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 5.3e-79 298.1 196 74.5
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.2e-78 297.0 197 76.6
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 1.2e-78 297.0 196 74.5
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 1.5e-78 296.6 196 75.0
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.0e-77 293.9 190 76.3
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 1.3e-77 293.5 196 71.9
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 1.3e-77 293.5 196 71.9
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 1.3e-77 293.5 196 71.9
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 1.3e-77 293.5 196 71.9
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 1.7e-77 293.1 196 71.4
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 2.9e-77 292.4 196 71.4
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 6.5e-77 291.2 190 74.7
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 6.5e-77 291.2 195 71.3
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 1.1e-76 290.4 196 73.0
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 4.2e-76 288.5 193 72.5
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 5.5e-76 288.1 201 71.1
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 9.4e-76 287.3 196 73.0
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 3.6e-75 285.4 194 73.7
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 6.1e-75 284.6 190 72.6
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 3.0e-74 282.3 194 72.7
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 6.3e-72 274.6 196 69.9
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 1.8e-71 273.1 198 68.2
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 2.4e-71 272.7 197 70.1
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 3.5e-70 268.9 198 67.2
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.7e-69 266.5 185 70.3
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 2.5e-68 262.7 198 65.7
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 9.4e-68 260.8 198 65.2
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 9.1e-63 244.2 149 79.9
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 2.9e-61 239.2 158 73.4
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 5.0e-61 238.4 158 73.4
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 1.1e-60 237.3 196 59.2
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 1.1e-60 237.3 196 59.2
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 5.5e-52 208.4 184 56.0
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 1.6e-51 206.8 140 72.9
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 6.3e-48 194.9 192 50.5
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.5e-46 189.1 172 59.9
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 3.8e-45 185.7 196 55.1
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 3.6e-43 179.1 189 47.6
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 8.0e-43 177.9 164 49.4
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.0e-42 177.6 91 93.4
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.3e-40 170.6 115 70.4
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 4.1e-39 165.6 198 44.4
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.4e-32 141.7 81 91.4
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.9e-31 140.2 81 90.1
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 9.2e-31 137.9 81 88.9
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 2.0e-30 136.7 206 38.3
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.7e-30 136.3 80 88.8
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 2.9e-24 116.3 95 65.3
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 2.4e-23 113.2 156 44.9
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 2.5e-20 103.2 247 29.1
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 5.6e-20 102.1 176 33.0
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 8.1e-19 98.2 208 31.7
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 3.5e-14 82.8 43 86.0
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 2.3e-13 80.1 172 34.9


User provided reference genes

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