Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049840 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 2.2e-25 119.8 63 100.0
TAR633G0769 Trochodendron aralioides HOM05D007682 ORTHO05D009690 7.0e-24 114.8 63 95.2
PSO407G0292 Papaver somniferum HOM05D007682 ORTHO05D009690 9.2e-24 114.4 61 98.4
PSO170G1207 Papaver somniferum HOM05D007682 ORTHO05D009690 2.1e-23 113.2 61 96.7
Nn4g25761 Nelumbo nucifera HOM05D007682 ORTHO05D009690 3.5e-23 112.5 62 93.5
Dinv30837 Davidia involucrata HOM05D007682 ORTHO05D009690 8.6e-22 107.8 63 88.9
Gohir.A08G208100 Gossypium hirsutum HOM05D007682 ORTHO05D009690 8.6e-22 107.8 63 88.9
Hma1.2p1_0472F.1_g159680 Hydrangea macrophylla HOM05D007682 ORTHO05D009690 8.6e-22 107.8 63 88.9
Potri.005G023000 Populus trichocarpa HOM05D007682 ORTHO05D009690 8.6e-22 107.8 63 90.5
Gorai.007G301900 Gossypium raimondii HOM05D007682 ORTHO05D009690 1.5e-21 107.1 63 88.9
CDE11G0615 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 1.9e-21 106.7 61 90.2
FAN20G0672 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.9e-21 106.7 63 87.3
FAN24G1339 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.9e-21 106.7 63 87.3
Lsat_1_v5_gn_7_72960 Lactuca sativa HOM05D007682 ORTHO05D009690 2.5e-21 106.3 63 87.3
Gohir.D08G224900 Gossypium hirsutum HOM05D007682 ORTHO05D009690 3.3e-21 105.9 62 88.7
arahy.Tifrunner.gnm1.ann1.P6132C Arachis hypogaea HOM05D007682 ORTHO05D009690 4.3e-21 105.5 62 88.7
CDE05G1347 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 4.3e-21 105.5 58 93.1
Gohir.D11G279700 Gossypium hirsutum HOM05D007682 ORTHO05D009690 4.3e-21 105.5 63 87.3
Prupe.8G021600 Prunus persica HOM05D007682 ORTHO05D009690 4.3e-21 105.5 63 85.7
RcHm_v2.0_Chr6g0276771 Rosa chinensis HOM05D007682 ORTHO05D009690 4.3e-21 105.5 63 85.7
DCAR_022138 Daucus carota HOM05D007682 ORTHO05D009690 5.6e-21 105.1 63 85.7
Gohir.A11G269500 Gossypium hirsutum HOM05D007682 ORTHO05D009690 5.6e-21 105.1 63 87.3
Manes.08G115600 Manihot esculenta HOM05D007682 ORTHO05D009690 5.6e-21 105.1 61 90.2
Oeu010924.1 Olea europaea HOM05D007682 ORTHO05D009690 5.6e-21 105.1 61 88.5
HanXRQChr11g0340111 Helianthus annuus HOM05D007682 ORTHO05D009690 7.3e-21 104.8 63 85.7
Actinidia21502 Actinidia chinensis HOM05D007682 ORTHO05D009690 9.5e-21 104.4 62 88.7
THA.LOC104821730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 9.5e-21 104.4 62 87.1
Thecc.05G315600 Theobroma cacao HOM05D007682 ORTHO05D009690 9.5e-21 104.4 63 87.3
Gorai.004G238900 Gossypium raimondii HOM05D007682 ORTHO05D009690 1.2e-20 104.0 62 87.1
HPP92_010663 Vanilla planifolia HOM05D007682 ORTHO05D009690 1.2e-20 104.0 64 89.1
GSVIVG01031165001 Vitis vinifera HOM05D000036 ORTHO05D000441 1.2e-20 104.0 61 90.2
Atru.chr2.100 Acer truncatum HOM05D007682 ORTHO05D009690 1.6e-20 103.6 63 87.3
arahy.Tifrunner.gnm1.ann1.S47DRU Arachis hypogaea HOM05D007682 ORTHO05D009690 1.6e-20 103.6 61 88.5
Eucgr.H03256 Eucalyptus grandis HOM05D007682 ORTHO05D009690 1.6e-20 103.6 63 84.1
Glyma.19G231600 Glycine max HOM05D007682 ORTHO05D009690 1.6e-20 103.6 62 85.5
Peaxi162Scf00037g01515 Petunia axillaris HOM05D007682 ORTHO05D009690 1.6e-20 103.6 61 88.5
THA.LOC104818730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 2.1e-20 103.2 63 84.1
Sabra05G0029000 Salix brachista HOM05D007682 ORTHO05D009690 2.8e-20 102.8 62 88.7
SEGI_39810 Sequoiadendron giganteum HOM05D007682 ORTHO05D009690 2.8e-20 102.8 59 88.1
Sc16g0008750 Simmondsia chinensis HOM05D000036 ORTHO05D001038 2.8e-20 102.8 62 87.1
AUR62000737 Chenopodium quinoa HOM05D007682 ORTHO05D009690 4.7e-20 102.1 62 83.9
ECA236G4368 Erigeron canadensis HOM05D000036 ORTHO05D000441 4.7e-20 102.1 63 82.5
FAN15G0817 Fragaria x ananassa HOM05D007682 ORTHO05D009690 4.7e-20 102.1 63 84.1
PGR031G1366 Punica granatum HOM05D007682 ORTHO05D009690 4.7e-20 102.1 63 82.5
Glyma.03G234200 Glycine max HOM05D007682 ORTHO05D009690 6.2e-20 101.7 62 83.9
Nitab4.5_0003113g0070 Nicotiana tabacum HOM05D007682 ORTHO05D009690 6.2e-20 101.7 61 86.9
Phvul.006G088300 Phaseolus vulgaris HOM05D007682 ORTHO05D009690 6.2e-20 101.7 62 83.9
Cc02_g34370 Coffea canephora HOM05D007682 ORTHO05D009690 8.1e-20 101.3 59 88.1
Migut.N02098 Erythranthe guttata HOM05D007682 ORTHO05D009690 8.1e-20 101.3 61 85.2
SGA_v2.0_scaffold81G26104 Striga asiatica HOM05D007682 ORTHO05D009690 1.1e-19 100.9 63 81.0
CAN.G1273.42 Capsicum annuum HOM05D007682 ORTHO05D009690 1.4e-19 100.5 63 84.1
Haze_04118 Corylus avellana HOM05D007682 ORTHO05D009690 1.4e-19 100.5 63 81.0
CiPaw.08G159600 Carya illinoinensis HOM05D007682 ORTHO05D009690 1.8e-19 100.1 63 81.0
AUR62005227 Chenopodium quinoa HOM05D007682 ORTHO05D009690 2.3e-19 99.8 62 80.6
Medtr7g112600 Medicago truncatula HOM05D007682 ORTHO05D009690 2.3e-19 99.8 61 85.2
Psat3g011680 Pisum sativum HOM05D007682 ORTHO05D009690 2.3e-19 99.8 61 85.2
Sed0011876 Sechium edule HOM05D007682 ORTHO05D009690 3.1e-19 99.4 62 82.3
Solyc01g099930.3 Solanum lycopersicum HOM05D007682 ORTHO05D009690 3.1e-19 99.4 63 82.5
MD10G1017700 Malus domestica HOM05D007682 ORTHO05D009690 4.0e-19 99.0 62 82.3
QL03p019528 Quercus lobata HOM05D007682 ORTHO05D009690 4.0e-19 99.0 62 79.0
Duzib177G0692 Durio zibethinus HOM05D007682 ORTHO05D009690 5.2e-19 98.6 59 88.1
TPR.G1619 Trifolium pratense HOM05D007682 ORTHO05D009690 5.2e-19 98.6 61 83.6
CSS0031357 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 8.9e-19 97.8 63 82.5
Lalb_Chr15g0077471 Lupinus albus HOM05D007682 ORTHO05D009690 8.9e-19 97.8 61 83.6
MSTRG.27972 Avicennia marina HOM05D007682 ORTHO05D009690 1.2e-18 97.4 58 84.5
Os12g0516700 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 1.2e-18 97.4 61 78.7
Os12g0554000 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 1.2e-18 97.4 61 78.7
TWI56G1223 Tripterygium wilfordii HOM05D007682 ORTHO05D009690 2.0e-18 96.7 61 82.0
BcaNung04745 Brassica carinata HOM05D007682 ORTHO05D009690 2.6e-18 96.3 59 83.1
Cfa006654 Carpinus fangiana HOM05D007682 ORTHO05D009690 4.4e-18 95.5 63 77.8
Sp2g20980 Schrenkiella parvula HOM05D007682 ORTHO05D009690 5.8e-18 95.1 59 83.1
CsaV3_1G038640 Cucumis sativus L. HOM05D007682 ORTHO05D009690 7.5e-18 94.7 61 80.3
A06p37270 Brassica napus HOM05D007682 ORTHO05D009690 9.9e-18 94.4 59 81.4
C07p41180 Brassica napus HOM05D007682 ORTHO05D009690 9.9e-18 94.4 59 81.4
BolC7t44646H Brassica oleracea HOM05D007682 ORTHO05D009690 9.9e-18 94.4 59 81.4
BraA06t26650Z Brassica rapa HOM05D007682 ORTHO05D009690 9.9e-18 94.4 59 81.4
CARHR186340 Cardamine hirsuta HOM05D007682 ORTHO05D009690 9.9e-18 94.4 59 83.1
Aa31LG11G9610 Aethionema arabicum HOM05D007682 ORTHO05D009690 1.3e-17 94.0 59 81.4
SMO367G0406 Selaginella moellendorffii HOM05D007682 ORTHO05D009690 1.7e-17 93.6 61 78.7
AT5G27860 Arabidopsis thaliana HOM05D007682 ORTHO05D009690 2.9e-17 92.8 59 81.4
MBI19_g44105_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 2.9e-17 92.8 54 88.9
ATR0693G225 Amborella trichopoda HOM05D007682 ORTHO05D009690 1.1e-16 90.9 52 90.4
Hund07111 Selenicereus undatus HOM05D007682 ORTHO05D009690 1.4e-16 90.5 79 67.1
Lj1g0016295 Lotus japonicus HOM05D007682 ORTHO05D009690 7.1e-16 88.2 67 73.1
Zm00001eb410110 Zea mays HOM05D007682 ORTHO05D009690 9.2e-16 87.8 63 71.4
Nitab4.5_0003497g0050 Nicotiana tabacum HOM05D007682 ORTHO05D009690 1.2e-15 87.4 52 86.5
Ah.06g189950 Amaranthus hybridus HOM05D007682 ORTHO05D009690 2.1e-15 86.7 51 86.3
EL10Ac4g09894 Beta vulgaris HOM05D007682 ORTHO05D009690 6.0e-15 85.1 51 84.3
AL6G39080 Arabidopsis lyrata HOM05D007682 ORTHO05D009690 1.0e-14 84.3 59 76.3
HPP92_010684 Vanilla planifolia HOM05D007682 ORTHO05D009690 5.1e-14 82.0 53 84.9
unitig_699.g19250 Utricularia gibba HOM05D007682 ORTHO05D009690 8.6e-14 81.3 50 78.0
DCAR_022140 Daucus carota HOM05D007682 ORTHO05D009690 3.3e-13 79.3 55 72.7
MBI19_g47767_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 4.3e-13 79.0 54 81.5
VMungo0540G1787 Vigna mungo HOM05D007682 ORTHO05D009690 1.6e-07 60.5 33 87.9
FvH4_2g14440 Fragaria vesca HOM05D007682 ORTHO05D009690 2.7e-07 59.7 36 77.8


User provided reference genes

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