Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049833 Camellia sinensis var. sinensis HOM05D009149 ORTHO05D003639 1.7e-69 265.8 124 100.0
CSS0041949 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 2.7e-14 82.4 80 46.2
Nitab4.5_0006587g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.0e-13 80.5 80 45.0
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.3e-13 80.1 80 46.2
Nitab4.5_0001698g0030 Nicotiana tabacum HOM05D008778 ORTHO05D003639 3.8e-13 78.6 105 38.1
Sopen00g002430 Solanum pennellii HOM05D008778 ORTHO05D003639 3.8e-13 78.6 79 46.8
Sopen00g007290 Solanum pennellii HOM05D008778 ORTHO05D003639 3.8e-13 78.6 79 46.8
RcHm_v2.0_Chr2g0116581 Rosa chinensis HOM05D008702 ORTHO05D003639 5.0e-13 78.2 77 46.8
RcHm_v2.0_Chr2g0142701 Rosa chinensis HOM05D008702 ORTHO05D003639 5.0e-13 78.2 77 46.8
RcHm_v2.0_Chr6g0249161 Rosa chinensis HOM05D008702 ORTHO05D003639 5.0e-13 78.2 77 46.8
Nitab4.5_0000663g0030 Nicotiana tabacum HOM05D008778 ORTHO05D003639 6.5e-13 77.8 101 36.6
RcHm_v2.0_Chr2g0152981 Rosa chinensis HOM05D008702 ORTHO05D003639 6.5e-13 77.8 77 46.8
Nitab4.5_0000663g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 8.5e-13 77.4 80 43.8
Peaxi162Scf00820g00119 Petunia axillaris HOM05D008778 ORTHO05D003639 8.5e-13 77.4 80 43.8
RcHm_v2.0_Chr2g0138191 Rosa chinensis HOM05D008702 ORTHO05D003639 1.1e-12 77.0 77 46.8
Solyc05g010817.1 Solanum lycopersicum HOM05D008778 ORTHO05D003639 1.1e-12 77.0 79 45.6
Nitab4.5_0001698g0040 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.5e-12 76.6 79 43.0
RcHm_v2.0_Chr2g0121071 Rosa chinensis HOM05D008702 ORTHO05D003639 1.5e-12 76.6 77 46.8
Peaxi162Scf00820g00117 Petunia axillaris HOM05D008778 ORTHO05D003639 7.2e-12 74.3 80 42.5
Nitab4.5_0007634g0020 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.2e-11 73.6 79 41.8
Peaxi162Scf00169g00112 Petunia axillaris HOM05D008778 ORTHO05D003639 2.1e-11 72.8 80 40.0
RcHm_v2.0_Chr7g0194611 Rosa chinensis HOM05D009149 ORTHO05D003639 2.7e-11 72.4 77 42.9
PGSC0003DMG400002681 Solanum tuberosum HOM05D008778 ORTHO05D003639 4.7e-11 71.6 79 41.8
RcHm_v2.0_Chr5g0004321 Rosa chinensis HOM05D008702 ORTHO05D003639 6.1e-11 71.2 76 44.7
Peaxi162Scf00820g00045 Petunia axillaris HOM05D008778 ORTHO05D003639 1.0e-10 70.5 73 45.2
Sopen09g003880 Solanum pennellii HOM05D008778 ORTHO05D003639 1.0e-10 70.5 80 40.0
FvH4_1g21382 Fragaria vesca HOM05D016497 ORTHO05D019154 1.8e-10 69.7 77 40.3
FvH4_3g26742 Fragaria vesca HOM05D016656 ORTHO05D003639 1.8e-10 69.7 76 39.5
RcHm_v2.0_Chr5g0049171 Rosa chinensis HOM05D016656 ORTHO05D003639 3.0e-10 68.9 76 39.5
Sopen09g003890 Solanum pennellii HOM05D000006 ORTHO05D000001 3.0e-10 68.9 79 40.5
RcHm_v2.0_Chr3g0493631 Rosa chinensis HOM05D009149 ORTHO05D003639 4.0e-10 68.6 77 37.7
RcHm_v2.0_Chr6g0291271 Rosa chinensis HOM05D009149 ORTHO05D003639 6.8e-10 67.8 77 37.7
RcHm_v2.0_Chr2g0105541 Rosa chinensis HOM05D009149 ORTHO05D003639 8.8e-10 67.4 77 37.7
FvH4_1g29795 Fragaria vesca HOM05D009149 ORTHO05D003639 1.5e-09 66.6 100 36.0
RcHm_v2.0_Chr2g0131351 Rosa chinensis HOM05D009149 ORTHO05D003639 1.5e-09 66.6 77 37.7
RcHm_v2.0_Chr1g0336001 Rosa chinensis HOM05D009149 ORTHO05D003639 5.7e-09 64.7 77 36.4
RcHm_v2.0_Chr1g0350201 Rosa chinensis HOM05D009149 ORTHO05D003639 5.7e-09 64.7 76 36.8
RcHm_v2.0_Chr4g0419521 Rosa chinensis HOM05D009149 ORTHO05D003639 1.3e-08 63.5 77 36.4
FvH4_4g18552 Fragaria vesca HOM05D009149 ORTHO05D003639 4.9e-08 61.6 76 34.2
RcHm_v2.0_Chr2g0133021 Rosa chinensis HOM05D009149 ORTHO05D003639 8.3e-08 60.8 65 38.5
Cc00_g19240 Coffea canephora HOM05D009149 ORTHO05D003639 3.5e-06 55.5 74 32.4
arahy.Tifrunner.gnm1.ann1.8YAR3M Arachis hypogaea HOM05D018927 ORTHO05D003639 5.9e-06 54.7 97 30.9
arahy.Tifrunner.gnm1.ann1.YI8NBA Arachis hypogaea HOM05D018927 ORTHO05D003639 7.7e-06 54.3 77 35.1


User provided reference genes

Program Settings