Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 6.6e-53 210.3 97 100.0
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 5.3e-26 120.9 72 80.6
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 6.4e-24 114.0 60 86.7
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 3.2e-23 111.7 60 88.3
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 4.2e-23 111.3 60 86.7
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 4.2e-23 111.3 60 86.7
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 4.2e-23 111.3 60 86.7
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 5.5e-23 110.9 60 86.7
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 2.1e-22 109.0 60 83.3
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 2.1e-22 109.0 73 75.3
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 4.6e-22 107.8 60 85.0
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 4.6e-22 107.8 57 87.7
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 6.0e-22 107.5 60 83.3
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 7.9e-22 107.1 60 85.0
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 7.9e-22 107.1 60 81.7
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 1.0e-21 106.7 57 84.2
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 1.8e-21 105.9 60 85.0
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 1.8e-21 105.9 60 83.3
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 1.8e-21 105.9 60 83.3
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 3.0e-21 105.1 61 83.6
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 3.0e-21 105.1 60 85.0
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 3.0e-21 105.1 57 84.2
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 3.9e-21 104.8 57 86.0
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 3.9e-21 104.8 60 81.7
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 8.7e-21 103.6 60 78.3
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 8.7e-21 103.6 64 79.7
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 8.7e-21 103.6 72 70.8
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 1.1e-20 103.2 60 81.7
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 1.1e-20 103.2 60 81.7
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 1.1e-20 103.2 60 81.7
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 1.5e-20 102.8 57 84.2
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 1.5e-20 102.8 59 83.1
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 1.5e-20 102.8 60 80.0
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 1.5e-20 102.8 60 80.0
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 1.9e-20 102.4 60 80.0
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 1.9e-20 102.4 64 76.6
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 2.5e-20 102.1 60 80.0
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 3.3e-20 101.7 60 80.0
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 4.3e-20 101.3 70 67.1
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 4.3e-20 101.3 73 71.2
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 5.6e-20 100.9 60 78.3
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 9.6e-20 100.1 60 78.3
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 1.3e-19 99.8 70 68.6
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 1.3e-19 99.8 57 80.7
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 1.3e-19 99.8 57 80.7
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.6e-19 99.4 57 78.9
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 1.6e-19 99.4 57 80.7
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 3.7e-19 98.2 60 78.3
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 4.8e-19 97.8 60 78.3
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 4.8e-19 97.8 60 78.3
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 4.8e-19 97.8 57 80.7
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 6.2e-19 97.4 73 67.1
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 6.2e-19 97.4 73 67.1
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 6.2e-19 97.4 60 76.7
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 8.2e-19 97.1 60 80.0
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 1.1e-18 96.7 60 75.0
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 1.1e-18 96.7 66 72.7
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 1.4e-18 96.3 60 76.7
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 1.4e-18 96.3 60 73.3
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 1.8e-18 95.9 66 68.2
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.8e-18 95.9 56 78.6
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 2.4e-18 95.5 63 74.6
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 3.1e-18 95.1 57 78.9
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 4.0e-18 94.7 66 74.2
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 5.3e-18 94.4 70 65.7
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 5.3e-18 94.4 60 75.0
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 6.9e-18 94.0 60 71.7
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.9e-18 94.0 60 71.7
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 6.9e-18 94.0 66 71.2
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 9.0e-18 93.6 57 77.2
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 9.0e-18 93.6 74 67.6
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.2e-17 93.2 57 77.2
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.5e-17 92.8 60 73.3
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 1.5e-17 92.8 60 73.3
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 1.5e-17 92.8 60 75.0
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.5e-17 92.8 70 65.7
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 2.0e-17 92.4 66 69.7
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 2.0e-17 92.4 60 71.7
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 5.8e-17 90.9 70 65.7
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 7.6e-17 90.5 60 71.7
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 7.6e-17 90.5 74 66.2
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.3e-16 89.7 60 70.0
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.3e-16 89.7 60 70.0
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.3e-16 89.7 60 70.0
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.3e-16 89.7 59 69.5
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 4.9e-16 87.8 61 72.1
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 6.5e-16 87.4 62 67.7
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 8.4e-16 87.0 61 72.1
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 8.4e-16 87.0 61 72.1
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.1e-15 86.7 71 66.2
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 2.5e-15 85.5 61 68.9
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 7.1e-15 84.0 63 68.3
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 9.3e-15 83.6 61 70.5
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 9.3e-15 83.6 87 55.2
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 9.3e-15 83.6 57 70.2
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 1.2e-14 83.2 58 72.4
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 3.5e-14 81.6 57 68.4
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 1.3e-13 79.7 58 67.2
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 1.3e-13 79.7 58 67.2
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 2.3e-13 79.0 58 67.2
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 2.3e-13 79.0 72 55.6
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 8.7e-13 77.0 46 78.3
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-11 72.8 50 72.0
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 2.2e-11 72.4 59 61.0
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 2.4e-10 68.9 77 51.9
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 1.2e-09 66.6 50 66.0
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 1.7e-08 62.8 67 47.8
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.7e-06 55.5 33 75.8
COL.COLO4_26864 Corchorus olitorius HOM05D002341 ORTHO05D003165 7.9e-06 53.9 33 72.7


User provided reference genes

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