Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049811 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D017217 8.1e-52 206.8 108 100.0
CSS0006532 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D017217 7.9e-31 137.1 86 80.2
CSS0027204 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D017217 1.5e-29 132.9 87 80.5
Actinidia01105 Actinidia chinensis HOM05D000012 ORTHO05D017217 1.7e-28 129.4 74 85.1
Prupe.6G272600 Prunus persica HOM05D000012 ORTHO05D003972 1.6e-23 112.8 73 69.9
Atru.chr8.2213 Acer truncatum HOM05D000012 ORTHO05D003972 2.1e-23 112.5 97 58.8
CANSAT35G1456 Cannabis sativa HOM05D000012 ORTHO05D003972 5.7e-21 104.4 94 55.3
Actinidia01104 Actinidia chinensis HOM05D000012 ORTHO05D003972 1.3e-20 103.2 72 70.8
Migut.J00191 Erythranthe guttata HOM05D000012 ORTHO05D003972 1.3e-20 103.2 77 62.3
MD04G1148300 Malus domestica HOM05D000012 ORTHO05D003972 3.7e-20 101.7 68 69.1
QL07p035973 Quercus lobata HOM05D000012 ORTHO05D003972 6.3e-20 100.9 92 58.7
SalBow5G4030 Salvia bowleyana HOM05D000012 ORTHO05D003972 6.3e-20 100.9 74 67.6
Prupe.6G272500 Prunus persica HOM05D000012 ORTHO05D003972 5.3e-19 97.8 70 64.3
Dinv37071 Davidia involucrata HOM05D001221 ORTHO05D009285 5.9e-18 94.4 92 56.5
QL07p035967 Quercus lobata HOM05D000012 ORTHO05D003972 1.7e-17 92.8 71 66.2
Cc06_g01560 Coffea canephora HOM05D000012 ORTHO05D003972 1.1e-16 90.1 72 62.5
Ciclev10013488m.g Citrus clementina HOM05D000012 ORTHO05D003972 2.5e-16 89.0 71 60.6
CANSAT35G1359 Cannabis sativa HOM05D000012 ORTHO05D003972 7.2e-16 87.4 92 46.7
QL07p035998 Quercus lobata HOM05D000012 ORTHO05D003972 2.1e-15 85.9 67 64.2
Lj2A78G30 Lonicera japonica HOM05D000012 ORTHO05D003972 2.7e-15 85.5 73 58.9
Cfa013509 Carpinus fangiana HOM05D000012 ORTHO05D003972 3.6e-15 85.1 96 52.1
QL07p035993 Quercus lobata HOM05D000012 ORTHO05D003972 4.7e-15 84.7 92 50.0
Lj3A127T4 Lonicera japonica HOM05D000012 ORTHO05D003972 8.0e-15 84.0 73 57.5
Nn2g11409 Nelumbo nucifera HOM05D000012 ORTHO05D003972 1.8e-14 82.8 73 53.4
DCAR_018721 Daucus carota HOM05D000012 ORTHO05D003972 3.9e-14 81.6 71 57.7
Ciclev10013636m.g Citrus clementina HOM05D000012 ORTHO05D003972 6.7e-14 80.9 73 52.1
unitig_8.g3230 Utricularia gibba HOM05D007005 ORTHO05D008799 1.1e-13 80.1 75 57.3
Cpa.g.sc163.8 Carica papaya HOM05D000012 ORTHO05D003972 1.5e-13 79.7 93 43.0
HanXRQChr08g0220531 Helianthus annuus HOM05D000012 ORTHO05D003972 2.0e-13 79.3 70 55.7
HanXRQChr08g0219721 Helianthus annuus HOM05D006125 ORTHO05D007404 2.6e-13 79.0 86 48.8
Lsat_1_v5_gn_8_99941 Lactuca sativa HOM05D000012 ORTHO05D003972 2.6e-13 79.0 70 52.9
AL4G35100 Arabidopsis lyrata HOM05D000012 ORTHO05D003972 3.3e-13 78.6 115 43.5
Carub.0004s2007 Capsella rubella HOM05D000012 ORTHO05D003972 5.7e-13 77.8 115 43.5
AUR62021861 Chenopodium quinoa HOM05D000012 ORTHO05D003972 5.7e-13 77.8 70 51.4
Thhalv10016530m.g Eutrema salsugineum HOM05D000012 ORTHO05D003972 1.3e-12 76.6 87 51.7
EL10Ac8g20188 Beta vulgaris HOM05D000012 ORTHO05D003972 1.7e-12 76.3 70 50.0
Oeu030521.1 Olea europaea HOM05D000012 ORTHO05D003972 1.7e-12 76.3 96 50.0
ECA236G1283 Erigeron canadensis HOM05D000012 ORTHO05D000567 4.8e-12 74.7 71 53.5
BraA05t19759Z Brassica rapa HOM05D000012 ORTHO05D003972 6.3e-12 74.3 85 48.2
A05p07940 Brassica napus HOM05D000012 ORTHO05D003972 8.2e-12 73.9 85 48.2
CARHR132680 Cardamine hirsuta HOM05D000012 ORTHO05D003972 1.1e-11 73.6 87 49.4
Migut.J00193 Erythranthe guttata HOM05D000012 ORTHO05D003972 1.1e-11 73.6 74 52.7
BcaC02g11953 Brassica carinata HOM05D000012 ORTHO05D003972 2.4e-11 72.4 87 46.0
BolC4t22566H Brassica oleracea HOM05D000012 ORTHO05D003972 2.4e-11 72.4 87 46.0
CANSAT35G0460 Cannabis sativa HOM05D000012 ORTHO05D003972 2.4e-11 72.4 90 41.1
Migut.J00198 Erythranthe guttata HOM05D000012 ORTHO05D003972 2.4e-11 72.4 91 46.2
SGA_v2.0_scaffold85G26754 Striga asiatica HOM05D001221 ORTHO05D009285 3.1e-11 72.0 91 44.0
HanXRQChr08g0211441 Helianthus annuus HOM05D000012 ORTHO05D003972 5.3e-11 71.2 70 51.4
BcaB02g09218 Brassica carinata HOM05D000012 ORTHO05D003972 7.0e-11 70.9 115 39.1
QL07p035978 Quercus lobata HOM05D000012 ORTHO05D003972 7.0e-11 70.9 56 62.5
AUR62012791 Chenopodium quinoa HOM05D000012 ORTHO05D003972 9.1e-11 70.5 78 46.2
AUR62012793 Chenopodium quinoa HOM05D000012 ORTHO05D003972 9.1e-11 70.5 78 46.2
Cc00_g17610 Coffea canephora HOM05D000012 ORTHO05D017217 9.1e-11 70.5 75 48.0
Lsat_1_v5_gn_2_3761 Lactuca sativa HOM05D000012 ORTHO05D003972 9.1e-11 70.5 70 52.9
SalBow5G4197 Salvia bowleyana HOM05D000012 ORTHO05D003972 1.2e-10 70.1 93 46.2
SalBow5G5134 Salvia bowleyana HOM05D000012 ORTHO05D003972 1.2e-10 70.1 93 46.2
Cfa017238 Carpinus fangiana HOM05D000012 ORTHO05D003972 1.6e-10 69.7 71 57.7
Duzib093G0916 Durio zibethinus HOM05D000012 ORTHO05D003972 1.6e-10 69.7 74 51.4
Cc11_g06880 Coffea canephora HOM05D000012 ORTHO05D003972 2.6e-10 68.9 73 50.7
Migut.J00197 Erythranthe guttata HOM05D000012 ORTHO05D003972 2.6e-10 68.9 76 46.1
TAR636G0546 Trochodendron aralioides HOM05D000012 ORTHO05D003972 2.6e-10 68.9 59 59.3
Aa31sc236G20 Aethionema arabicum HOM05D000012 ORTHO05D003972 3.5e-10 68.6 88 46.6
Cc11_g06890 Coffea canephora HOM05D000012 ORTHO05D003972 3.5e-10 68.6 94 41.5
THA.LOC104806521 Tarenaya hassleriana HOM05D000012 ORTHO05D003972 4.5e-10 68.2 70 52.9
C04p09590 Brassica napus HOM05D000012 ORTHO05D003972 5.9e-10 67.8 86 46.5
HanXRQChr04g0102001 Helianthus annuus HOM05D000012 ORTHO05D003972 5.9e-10 67.8 70 51.4
AT2G38100 Arabidopsis thaliana HOM05D000012 ORTHO05D003972 7.7e-10 67.4 99 44.4
SalBow1G4398 Salvia bowleyana HOM05D000012 ORTHO05D003972 7.7e-10 67.4 75 50.7
SalBow5G4867 Salvia bowleyana HOM05D000012 ORTHO05D003972 1.0e-09 67.0 70 50.0
CiPaw.10G155000 Carya illinoinensis HOM05D000012 ORTHO05D003972 1.7e-09 66.2 72 50.0
SalBow5G4000 Salvia bowleyana HOM05D000012 ORTHO05D003972 2.9e-09 65.5 70 50.0
Sp4g20420 Schrenkiella parvula HOM05D000012 ORTHO05D003972 2.9e-09 65.5 71 52.1
AUR62012790 Chenopodium quinoa HOM05D000012 ORTHO05D003972 5.0e-09 64.7 74 44.6
AUR62021863 Chenopodium quinoa HOM05D000012 ORTHO05D003972 5.0e-09 64.7 74 44.6
Cc11_g10430 Coffea canephora HOM05D000012 ORTHO05D003972 5.0e-09 64.7 80 46.2
AUR62021862 Chenopodium quinoa HOM05D000012 ORTHO05D003972 8.5e-09 63.9 76 43.4
RcHm_v2.0_Chr5g0061221 Rosa chinensis HOM05D000012 ORTHO05D017217 8.5e-09 63.9 62 50.0
SalBow5G0084 Salvia bowleyana HOM05D000103 ORTHO05D017217 1.9e-08 62.8 70 48.6
Actinidia18445 Actinidia chinensis HOM05D000012 ORTHO05D003972 2.5e-08 62.4 83 38.6
CANSAT35G0501 Cannabis sativa HOM05D000012 ORTHO05D003972 3.2e-08 62.0 71 47.9
SalBow5G5066 Salvia bowleyana HOM05D000012 ORTHO05D003972 3.2e-08 62.0 83 42.2
SalBow5G2554 Salvia bowleyana HOM05D000012 ORTHO05D003972 4.2e-08 61.6 83 42.2
SalBow5G2834 Salvia bowleyana HOM05D000012 ORTHO05D003972 4.2e-08 61.6 83 42.2
SalBow5G4460 Salvia bowleyana HOM05D000012 ORTHO05D003972 4.2e-08 61.6 83 42.2
SalBow5G4034 Salvia bowleyana HOM05D000012 ORTHO05D003972 1.6e-07 59.7 83 42.2
Haze_20965 Corylus avellana HOM05D000012 ORTHO05D003972 2.7e-07 58.9 59 50.8
Migut.J00194 Erythranthe guttata HOM05D000012 ORTHO05D003972 3.6e-07 58.5 60 48.3
CANSAT35G0684 Cannabis sativa HOM05D000012 ORTHO05D003972 8.0e-07 57.4 71 46.5
Lj3A108T19 Lonicera japonica HOM05D000012 ORTHO05D017217 8.0e-07 57.4 60 50.0
Prupe.6G272400 Prunus persica HOM05D000012 ORTHO05D003972 8.0e-07 57.4 73 41.1
SalBow5G2865 Salvia bowleyana HOM05D000012 ORTHO05D003972 8.0e-07 57.4 83 41.0
Nitab4.5_0001264g0210 Nicotiana tabacum HOM05D000012 ORTHO05D003972 1.0e-06 57.0 70 47.1
Migut.J00192 Erythranthe guttata HOM05D000012 ORTHO05D003972 1.8e-06 56.2 60 46.7
Nitab4.5_0002650g0020 Nicotiana tabacum HOM05D000012 ORTHO05D003972 1.8e-06 56.2 68 47.1
FvH4_6g11880 Fragaria vesca HOM05D000012 ORTHO05D003972 2.3e-06 55.8 67 41.8
FAN14G2604 Fragaria x ananassa HOM05D000012 ORTHO05D003972 2.3e-06 55.8 67 40.3
FAN14G4999 Fragaria x ananassa HOM05D000012 ORTHO05D003972 2.3e-06 55.8 67 41.8
EL10Ac8g20184 Beta vulgaris HOM05D000012 ORTHO05D003972 3.0e-06 55.5 65 50.8
FAN02G1045 Fragaria x ananassa HOM05D000012 ORTHO05D003972 4.0e-06 55.1 67 41.8
Haze_20968 Corylus avellana HOM05D000012 ORTHO05D003972 5.2e-06 54.7 93 43.0
FvH4_6g11890 Fragaria vesca HOM05D000012 ORTHO05D003972 5.2e-06 54.7 78 37.2
unitig_27.g24861 Utricularia gibba HOM05D000012 ORTHO05D003972 5.2e-06 54.7 91 38.5


User provided reference genes

Program Settings