Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049801 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 3.1e-99 365.2 185 100.0
CSS0040657 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 1.4e-96 356.3 185 98.9
Actinidia22895 Actinidia chinensis HOM05D001617 ORTHO05D008611 8.7e-70 267.3 177 73.4
Actinidia17356 Actinidia chinensis HOM05D001617 ORTHO05D008611 5.3e-67 258.1 173 74.6
Dinv40191 Davidia involucrata HOM05D001617 ORTHO05D008611 1.2e-66 256.9 174 72.4
Rhsim10G0195300 Rhododendron simsii HOM05D001617 ORTHO05D008611 1.3e-65 253.4 181 71.8
Hma1.2p1_0300F.1_g117970 Hydrangea macrophylla HOM05D001617 ORTHO05D008611 2.3e-62 242.7 176 67.0
TAR625G0652 Trochodendron aralioides HOM05D001617 ORTHO05D008611 1.3e-60 236.9 169 66.9
Haze_03607 Corylus avellana HOM05D001617 ORTHO05D008611 4.2e-56 221.9 170 64.1
RcHm_v2.0_Chr2g0097101 Rosa chinensis HOM05D001617 ORTHO05D008611 1.2e-55 220.3 170 63.5
FvH4_1g10271 Fragaria vesca HOM05D001617 ORTHO05D008611 2.7e-55 219.2 170 62.9
QL06p053003 Quercus lobata HOM05D001617 ORTHO05D008611 2.7e-55 219.2 171 63.2
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 3.5e-55 218.8 170 62.4
Ca_24984_v3 Cicer arietinum L. HOM05D001617 ORTHO05D008611 1.3e-54 216.9 173 62.4
MD15G1230700 Malus domestica HOM05D001617 ORTHO05D008611 1.8e-54 216.5 170 62.9
Nn5g30995 Nelumbo nucifera HOM05D001617 ORTHO05D008611 1.8e-54 216.5 173 60.1
Prupe.7G183400 Prunus persica HOM05D001617 ORTHO05D008611 3.9e-54 215.3 166 65.1
Potri.018G026700 Populus trichocarpa HOM05D001617 ORTHO05D008611 6.7e-54 214.5 171 62.0
MD02G1114800 Malus domestica HOM05D001617 ORTHO05D008611 8.7e-54 214.2 170 62.9
TPR.G24692 Trifolium pratense HOM05D001617 ORTHO05D008611 3.3e-53 212.2 173 59.5
Sabra06G0199600 Salix brachista HOM05D001617 ORTHO05D008611 4.3e-53 211.8 170 64.7
Manes.03G014200 Manihot esculenta HOM05D001617 ORTHO05D008611 7.4e-53 211.1 166 60.8
HanXRQChr03g0061381 Helianthus annuus HOM05D001617 ORTHO05D008611 1.6e-52 209.9 175 56.0
CiPaw.08G181900 Carya illinoinensis HOM05D001617 ORTHO05D008611 2.8e-52 209.1 171 63.2
Atru.chr3.130 Acer truncatum HOM05D001617 ORTHO05D008611 3.1e-51 205.7 173 57.2
TPR.G27884 Trifolium pratense HOM05D001617 ORTHO05D008611 3.1e-51 205.7 173 58.4
Psat4g142640 Pisum sativum HOM05D001617 ORTHO05D008611 5.3e-51 204.9 173 57.2
Ciclev10026581m.g Citrus clementina HOM05D001617 ORTHO05D008611 3.4e-50 202.2 175 58.9
Glyma.01G158500 Glycine max HOM05D001617 ORTHO05D008611 3.4e-50 202.2 170 59.4
Lalb_Chr05g0214811 Lupinus albus HOM05D001617 ORTHO05D008611 3.4e-50 202.2 168 59.5
Sc07g0001380 Simmondsia chinensis HOM05D001617 ORTHO05D008611 1.0e-49 200.7 172 56.4
Glyma.11G086100 Glycine max HOM05D001617 ORTHO05D008611 1.3e-49 200.3 170 58.8
Medtr7g006210 Medicago truncatula HOM05D001617 ORTHO05D008611 1.3e-49 200.3 170 57.6
Solyc02g038814.1 Solanum lycopersicum HOM05D001617 ORTHO05D008611 1.3e-49 200.3 177 57.6
Sopen02g012580 Solanum pennellii HOM05D001617 ORTHO05D008611 1.3e-49 200.3 177 57.6
Lsat_1_v5_gn_7_41980 Lactuca sativa HOM05D001617 ORTHO05D008611 1.7e-49 199.9 176 54.0
ECA240G2496 Erigeron canadensis HOM05D001617 ORTHO05D008611 3.8e-49 198.7 177 56.5
Phvul.002G116800 Phaseolus vulgaris HOM05D001617 ORTHO05D008611 5.0e-49 198.4 171 55.6
arahy.Tifrunner.gnm1.ann1.00REGV Arachis hypogaea HOM05D001617 ORTHO05D008611 6.5e-49 198.0 169 56.8
arahy.Tifrunner.gnm1.ann1.P3NXZX Arachis hypogaea HOM05D001617 ORTHO05D008611 6.5e-49 198.0 169 56.8
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 6.5e-49 198.0 206 51.5
Duzib147G0359 Durio zibethinus HOM05D001617 ORTHO05D008611 2.5e-48 196.1 180 58.3
PSO210G2591 Papaver somniferum HOM05D001617 ORTHO05D008611 3.2e-48 195.7 174 51.7
Peaxi162Scf00580g00110 Petunia axillaris HOM05D001617 ORTHO05D008611 5.5e-48 194.9 179 57.0
Nitab4.5_0001365g0060 Nicotiana tabacum HOM05D001617 ORTHO05D008611 1.2e-47 193.7 182 56.0
Lalb_Chr16g0380051 Lupinus albus HOM05D001617 ORTHO05D008611 2.1e-47 193.0 170 55.3
Aqoxy6G01611 Aquilegia oxysepala HOM05D001617 ORTHO05D008611 2.7e-47 192.6 165 53.3
GSVIVG01013391001 Vitis vinifera HOM05D001617 ORTHO05D008611 3.6e-47 192.2 168 58.3
AUR62003746 Chenopodium quinoa HOM05D001617 ORTHO05D008611 2.3e-46 189.5 174 53.4
Lj2g0016890 Lotus japonicus HOM05D001617 ORTHO05D008611 3.9e-46 188.7 169 59.8
Nitab4.5_0000467g0050 Nicotiana tabacum HOM05D001617 ORTHO05D008611 3.9e-46 188.7 199 51.3
SGA_v2.0_scaffold280G46856 Striga asiatica HOM05D001617 ORTHO05D008611 3.9e-46 188.7 185 50.8
PGR119G0287 Punica granatum HOM05D001617 ORTHO05D008611 1.1e-45 187.2 167 56.9
Thecc.01G005100 Theobroma cacao HOM05D001617 ORTHO05D008611 1.1e-45 187.2 176 57.4
PSO761G0409 Papaver somniferum HOM05D001617 ORTHO05D008611 4.3e-45 185.3 178 48.3
Cc07_g11900 Coffea canephora HOM05D001617 ORTHO05D008611 7.4e-45 184.5 176 55.1
Eucgr.I02221 Eucalyptus grandis HOM05D001617 ORTHO05D008611 1.6e-44 183.3 171 55.0
ATR0807G073 Amborella trichopoda HOM05D001617 ORTHO05D008611 4.8e-44 181.8 177 50.8
Potri.006G255301 Populus trichocarpa HOM05D001617 ORTHO05D008611 4.8e-44 181.8 168 56.5
Migut.H02499 Erythranthe guttata HOM05D001617 ORTHO05D008611 8.2e-44 181.0 181 49.2
AUR62002049 Chenopodium quinoa HOM05D001617 ORTHO05D008611 1.8e-43 179.9 174 51.7
Sed0024019 Sechium edule HOM05D001617 ORTHO05D008611 5.3e-43 178.3 170 55.3
PGSC0003DMG400017488 Solanum tuberosum HOM05D001617 ORTHO05D008611 6.9e-43 177.9 199 50.8
Gorai.003G002100 Gossypium raimondii HOM05D001617 ORTHO05D008611 1.2e-42 177.2 165 60.0
Gohir.D03G001800 Gossypium hirsutum HOM05D001617 ORTHO05D008611 2.6e-42 176.0 165 59.4
THA.LOC104819716 Tarenaya hassleriana HOM05D001617 ORTHO05D008611 4.5e-42 175.3 176 51.7
AT4G35530 Arabidopsis thaliana HOM05D001617 ORTHO05D008611 7.7e-42 174.5 171 54.4
Gohir.A02G178000 Gossypium hirsutum HOM05D001617 ORTHO05D008611 7.7e-42 174.5 165 59.4
A03p63650 Brassica napus HOM05D001617 ORTHO05D008611 2.2e-41 172.9 171 52.6
BraA03t15436Z Brassica rapa HOM05D001617 ORTHO05D008611 2.2e-41 172.9 171 52.6
CsaV3_3G000210 Cucumis sativus L. HOM05D001617 ORTHO05D008611 2.9e-41 172.6 174 53.4
AL7G15630 Arabidopsis lyrata HOM05D001617 ORTHO05D008611 3.8e-41 172.2 173 52.0
Aa31LG6G12490 Aethionema arabicum HOM05D001617 ORTHO05D008611 1.4e-40 170.2 180 50.6
TWI09G0535 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 1.4e-40 170.2 170 55.3
Carub.0007s0479 Capsella rubella HOM05D001617 ORTHO05D008611 1.9e-40 169.9 170 52.9
C07p61220 Brassica napus HOM05D001617 ORTHO05D008611 2.5e-40 169.5 172 52.3
BolC7t46548H Brassica oleracea HOM05D001617 ORTHO05D008611 2.5e-40 169.5 172 52.3
Medtr8g446540 Medicago truncatula HOM05D001617 ORTHO05D008611 4.2e-40 168.7 151 57.0
A01p03080 Brassica napus HOM05D001617 ORTHO05D008611 3.6e-39 165.6 181 46.4
BraA01t00292Z Brassica rapa HOM05D001617 ORTHO05D008611 1.0e-38 164.1 181 45.9
Os05g0165400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 1.4e-38 163.7 165 48.5
Sp7g33310 Schrenkiella parvula HOM05D001617 ORTHO05D008611 1.8e-38 163.3 176 51.1
Thhalv10026286m.g Eutrema salsugineum HOM05D001617 ORTHO05D008611 3.0e-38 162.5 172 50.6
BcaNung03634 Brassica carinata HOM05D001617 ORTHO05D008611 6.7e-38 161.4 168 50.6
Zm00001eb123330 Zea mays HOM05D001617 ORTHO05D008611 8.8e-38 161.0 173 46.8
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 2.2e-36 156.4 111 65.8
Hund03599 Selenicereus undatus HOM05D001617 ORTHO05D008611 2.8e-36 156.0 174 48.3
SalBow8G0576 Salvia bowleyana HOM05D001617 ORTHO05D008611 1.4e-35 153.7 167 48.5
HPP92_001135 Vanilla planifolia HOM05D001617 ORTHO05D008611 2.4e-35 152.9 167 46.1
ClCG10G000190 Citrullus lanatus HOM05D001617 ORTHO05D008611 2.0e-34 149.8 185 47.6
TWI73G0916 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 2.6e-34 149.4 170 51.2
CARHR243860 Cardamine hirsuta HOM05D001617 ORTHO05D008611 4.5e-34 148.7 116 61.2
CANSAT25G0226 Cannabis sativa HOM05D001617 ORTHO05D008611 7.7e-34 147.9 185 46.5
QL02p015100 Quercus lobata HOM05D001617 ORTHO05D008611 1.0e-33 147.5 159 49.7
Lj2g0001157 Lotus japonicus HOM05D001617 ORTHO05D008611 3.8e-33 145.6 109 66.1
EL10Ac6g15051 Beta vulgaris HOM05D001617 ORTHO05D008611 3.2e-32 142.5 216 40.3
MELO3C013716.2 Cucumis melo HOM05D001617 ORTHO05D008611 1.2e-31 140.6 85 71.8
COL.COLO4_22553 Corchorus olitorius HOM05D001617 ORTHO05D008611 2.3e-30 136.3 177 47.5
SEGI_30027 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 3.9e-30 135.6 177 40.1
Manes.03G014750 Manihot esculenta HOM05D001617 ORTHO05D008611 8.8e-30 134.4 174 43.1
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 4.8e-28 128.6 152 40.8
BcaNung00584 Brassica carinata HOM05D001617 ORTHO05D008611 1.1e-27 127.5 169 45.6
QL02p015033 Quercus lobata HOM05D001617 ORTHO05D008611 5.3e-27 125.2 157 45.9
SEGI_12529 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 5.3e-27 125.2 94 57.4
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 7.0e-27 124.8 131 49.6
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 2.2e-25 119.8 75 73.3
unitig_46.g18791 Utricularia gibba HOM05D001617 ORTHO05D008611 1.5e-24 117.1 170 40.0
Pp3c25_310 Physcomitrium patens HOM05D001617 ORTHO05D008611 3.2e-24 115.9 166 38.0
TAR381G0965 Trochodendron aralioides HOM05D001617 ORTHO05D008611 7.2e-24 114.8 68 79.4
C01p03430 Brassica napus HOM05D001617 ORTHO05D008611 4.0e-22 109.0 189 38.6
BolC1t00330H Brassica oleracea HOM05D001617 ORTHO05D008611 4.0e-22 109.0 189 38.6
AagrBONN_evm.TU.Sc2ySwM_368.1506 Anthoceros agrestis HOM05D001617 ORTHO05D008611 2.6e-21 106.3 130 42.3
Os01g0166400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 5.3e-19 98.6 74 55.4
Mapoly0064s0006 Marchantia polymorpha HOM05D001617 ORTHO05D008611 7.7e-18 94.7 147 35.4
Medtr7g005770 Medicago truncatula HOM05D001617 ORTHO05D008611 7.2e-16 88.2 68 63.2
arahy.Tifrunner.gnm1.ann1.JF0LYH Arachis hypogaea HOM05D001617 ORTHO05D008611 9.8e-13 77.8 81 54.3
CBR_g38242 Chara braunii HOM05D001617 ORTHO05D008611 2.2e-12 76.6 87 40.2
FAN28G0538 Fragaria x ananassa HOM05D001617 ORTHO05D002495 6.3e-12 75.1 75 52.0
SHI18558 Sapria himalayana HOM05D000291 ORTHO05D001358 1.1e-11 74.3 147 38.1
Zm00001eb345970 Zea mays HOM05D001617 ORTHO05D008611 8.8e-06 54.7 100 30.0


User provided reference genes

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