Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049785 Camellia sinensis var. sinensis HOM05D004666 ORTHO05D005822 2.7e-64 248.4 120 100.0
Dinv21227 Davidia involucrata HOM05D004666 ORTHO05D005822 2.8e-45 185.3 119 78.2
RhsimUnG0189100 Rhododendron simsii HOM05D004666 ORTHO05D005822 2.0e-43 179.1 119 74.8
Rhsim05G0022800 Rhododendron simsii HOM05D004666 ORTHO05D005822 1.3e-42 176.4 119 73.9
vmacro17219 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 2.1e-40 169.1 118 68.6
vmacro22687 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 6.1e-40 167.5 118 68.6
Hma1.2p1_2087F.1_g313760 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 3.5e-35 151.8 120 65.8
Hma1.2p1_0084F.1_g043480 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 7.7e-35 150.6 121 64.5
Potri.008G200900 Populus trichocarpa HOM05D004666 ORTHO05D005822 3.2e-33 145.2 114 62.3
QL07p039593 Quercus lobata HOM05D004666 ORTHO05D005822 5.5e-33 144.4 119 61.3
COL.COLO4_15658 Corchorus olitorius HOM05D004666 ORTHO05D005822 6.7e-31 137.5 117 62.4
CiPaw.09G011000 Carya illinoinensis HOM05D004666 ORTHO05D005822 1.1e-30 136.7 119 58.8
Cpa.g.sc5.49 Carica papaya HOM05D004666 ORTHO05D005822 2.6e-30 135.6 118 56.8
Duzib114G0569 Durio zibethinus HOM05D004666 ORTHO05D005822 4.4e-30 134.8 110 66.4
DCAR_013376 Daucus carota HOM05D004666 ORTHO05D005822 5.7e-30 134.4 120 57.5
Thecc.01G223300 Theobroma cacao HOM05D004666 ORTHO05D005822 2.2e-29 132.5 116 63.8
TWI34G1071 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 2.2e-29 132.5 134 54.5
Cfa002067 Carpinus fangiana HOM05D004666 ORTHO05D005822 2.8e-29 132.1 119 58.0
Haze_19573 Corylus avellana HOM05D004666 ORTHO05D005822 2.4e-28 129.0 119 58.8
Manes.13G012000 Manihot esculenta HOM05D004666 ORTHO05D005822 4.1e-28 128.3 117 56.4
Eucgr.L02043 Eucalyptus grandis HOM05D004666 ORTHO05D005822 2.6e-27 125.6 117 58.1
Medtr1g060580 Medicago truncatula HOM05D004666 ORTHO05D005822 2.2e-26 122.5 119 53.8
Glyma.10G068100 Glycine max HOM05D004666 ORTHO05D005822 6.5e-26 120.9 113 54.9
TWI73G1120 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 1.5e-25 119.8 117 53.8
arahy.Tifrunner.gnm1.ann1.WFL2XE Arachis hypogaea HOM05D004666 ORTHO05D005822 2.5e-25 119.0 118 54.2
Haze_16425 Corylus avellana HOM05D004666 ORTHO05D005822 4.2e-25 118.2 108 57.4
Oeu040521.1 Olea europaea HOM05D004666 ORTHO05D005822 7.2e-25 117.5 107 55.1
Lj5g0013478 Lotus japonicus HOM05D004666 ORTHO05D005822 8.0e-24 114.0 119 49.6
arahy.Tifrunner.gnm1.ann1.G8H5C8 Arachis hypogaea HOM05D004666 ORTHO05D005822 4.0e-23 111.7 118 52.5
Nitab4.5_0009916g0020 Nicotiana tabacum HOM05D004666 ORTHO05D005822 4.0e-23 111.7 113 50.4
PSO425G0050 Papaver somniferum HOM05D004666 ORTHO05D005822 4.0e-23 111.7 115 56.5
PSO384G1605 Papaver somniferum HOM05D004666 ORTHO05D005822 5.2e-23 111.3 115 54.8
arahy.Tifrunner.gnm1.ann1.LSN657 Arachis hypogaea HOM05D004666 ORTHO05D005822 6.7e-23 110.9 118 51.7
FAN03G3209 Fragaria x ananassa HOM05D004666 ORTHO05D005822 6.7e-23 110.9 147 46.3
Nitab4.5_0000794g0050 Nicotiana tabacum HOM05D004666 ORTHO05D005822 8.8e-23 110.5 113 50.4
RcHm_v2.0_Chr3g0472691 Rosa chinensis HOM05D004666 ORTHO05D005822 8.8e-23 110.5 147 47.6
AUR62028568 Chenopodium quinoa HOM05D004666 ORTHO05D005822 1.5e-22 109.8 108 50.9
Lalb_Chr02g0155381 Lupinus albus HOM05D004666 ORTHO05D005822 1.5e-22 109.8 119 47.9
TPR.G35431 Trifolium pratense HOM05D004666 ORTHO05D005822 2.0e-22 109.4 121 48.8
RcHm_v2.0_Chr4g0409331 Rosa chinensis HOM05D004666 ORTHO05D005822 2.6e-22 109.0 152 47.4
TAR365G1212 Trochodendron aralioides HOM05D004666 ORTHO05D005822 2.6e-22 109.0 102 54.9
Ah.08g210700 Amaranthus hybridus HOM05D004666 ORTHO05D005822 4.4e-22 108.2 107 57.9
arahy.Tifrunner.gnm1.ann1.T4KAXF Arachis hypogaea HOM05D004666 ORTHO05D005822 5.7e-22 107.8 106 54.7
Potri.006G036601 Populus trichocarpa HOM05D004666 ORTHO05D005822 7.5e-22 107.5 114 53.5
AL1G32230 Arabidopsis lyrata HOM05D004666 ORTHO05D005822 9.7e-22 107.1 116 50.9
Lj5g0018797 Lotus japonicus HOM05D004666 ORTHO05D005822 1.3e-21 106.7 119 49.6
AUR62033523 Chenopodium quinoa HOM05D004666 ORTHO05D005822 2.2e-21 105.9 107 55.1
Ca_26672_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 2.2e-21 105.9 119 50.4
Ca_30723_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 2.2e-21 105.9 119 50.4
Sed0022470 Sechium edule HOM05D004666 ORTHO05D005822 2.2e-21 105.9 111 48.6
Gohir.D07G206800 Gossypium hirsutum HOM05D004666 ORTHO05D005822 2.8e-21 105.5 149 45.0
EL10Ac7g16949 Beta vulgaris HOM05D004666 ORTHO05D005822 4.8e-21 104.8 112 51.8
GSVIVG01032069001 Vitis vinifera HOM05D004666 ORTHO05D005822 4.8e-21 104.8 67 71.6
Gorai.001G233200 Gossypium raimondii HOM05D004666 ORTHO05D005822 6.3e-21 104.4 149 44.3
Phvul.007G229800 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 6.3e-21 104.4 120 46.7
VMungo0720G2175 Vigna mungo HOM05D004666 ORTHO05D005822 8.3e-21 104.0 114 48.2
ClCG10G019140 Citrullus lanatus HOM05D004666 ORTHO05D005822 1.8e-20 102.8 107 49.5
MBI17_g35786_MAGBIO Magnolia biondii HOM05D004666 ORTHO05D005822 1.8e-20 102.8 102 54.9
Peaxi162Scf00015g00639 Petunia axillaris HOM05D004666 ORTHO05D005822 1.8e-20 102.8 111 49.5
Gohir.A07G200500 Gossypium hirsutum HOM05D004666 ORTHO05D005822 2.4e-20 102.4 149 44.3
Solyc09g009710.4 Solanum lycopersicum HOM05D004666 ORTHO05D005822 2.4e-20 102.4 112 47.3
Aqoxy3G00997 Aquilegia oxysepala HOM05D004666 ORTHO05D005822 3.1e-20 102.1 114 50.0
Sp1g17360 Schrenkiella parvula HOM05D004666 ORTHO05D005822 9.1e-20 100.5 115 48.7
Sopen09g004490 Solanum pennellii HOM05D004666 ORTHO05D005822 9.1e-20 100.5 112 46.4
THA.LOC104827512 Tarenaya hassleriana HOM05D004666 ORTHO05D005822 1.6e-19 99.8 114 53.5
A08p29790 Brassica napus HOM05D004666 ORTHO05D005822 2.7e-19 99.0 120 48.3
BolC8t49572H Brassica oleracea HOM05D004666 ORTHO05D005822 2.7e-19 99.0 114 45.6
BraA08t34913Z Brassica rapa HOM05D004666 ORTHO05D005822 2.7e-19 99.0 120 48.3
FvH4_7g02500 Fragaria vesca HOM05D004666 ORTHO05D005822 2.7e-19 99.0 152 42.8
AT1G19485 Arabidopsis thaliana HOM05D004666 ORTHO05D005822 3.5e-19 98.6 114 47.4
Phvul.011G176600 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 3.5e-19 98.6 113 46.9
FvH4_6g18260 Fragaria vesca HOM05D004666 ORTHO05D005822 4.5e-19 98.2 149 40.3
FAN14G5421 Fragaria x ananassa HOM05D004666 ORTHO05D005822 4.5e-19 98.2 149 40.3
Sc02g0001000 Simmondsia chinensis HOM05D004666 ORTHO05D005822 4.5e-19 98.2 110 47.3
PGR142G0825 Punica granatum HOM05D004666 ORTHO05D005822 1.3e-18 96.7 122 51.6
Carub.0001s1905 Capsella rubella HOM05D004666 ORTHO05D005822 2.9e-18 95.5 116 48.3
A06p15660 Brassica napus HOM05D004666 ORTHO05D005822 3.8e-18 95.1 119 47.1
BraA06t24675Z Brassica rapa HOM05D004666 ORTHO05D005822 3.8e-18 95.1 119 47.1
BcaB03g12912 Brassica carinata HOM05D004666 ORTHO05D005822 5.0e-18 94.7 114 46.5
MD09G1081300 Malus domestica HOM05D004666 ORTHO05D005822 5.0e-18 94.7 152 39.5
CARHR020050 Cardamine hirsuta HOM05D004666 ORTHO05D005822 8.5e-18 94.0 116 46.6
Psat6g082920 Pisum sativum HOM05D004666 ORTHO05D005822 8.5e-18 94.0 119 43.7
CANSAT54G2995 Cannabis sativa HOM05D004666 ORTHO05D005822 1.5e-17 93.2 113 46.9
C05p17890 Brassica napus HOM05D004666 ORTHO05D005822 3.2e-17 92.0 118 47.5
Thhalv10006802m.g Eutrema salsugineum HOM05D004666 ORTHO05D005822 3.2e-17 92.0 120 47.5
BolC5t30496H Brassica oleracea HOM05D004666 ORTHO05D005822 5.5e-17 91.3 117 46.2
Hund26220 Selenicereus undatus HOM05D004666 ORTHO05D005822 9.4e-17 90.5 110 49.1
Prupe.7G114200 Prunus persica HOM05D004666 ORTHO05D005822 1.6e-16 89.7 50 74.0
Lsat_1_v5_gn_1_48480 Lactuca sativa HOM05D004666 ORTHO05D005822 2.7e-16 89.0 85 56.5
SHI23868 Sapria himalayana HOM05D004666 ORTHO05D005822 2.7e-16 89.0 112 46.4
CDE08G1659 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 8.0e-16 87.4 87 54.0
MELO3C009457.2 Cucumis melo HOM05D004666 ORTHO05D005822 8.0e-16 87.4 123 41.5
ATR0820G266 Amborella trichopoda HOM05D004666 ORTHO05D005822 1.0e-15 87.0 108 50.0
Peaxi162Scf00036g00125 Petunia axillaris HOM05D004666 ORTHO05D005822 1.0e-15 87.0 107 46.7
Cc06_g05530 Coffea canephora HOM05D004666 ORTHO05D005822 3.0e-15 85.5 107 45.8
FAN06G2408 Fragaria x ananassa HOM05D004666 ORTHO05D005822 4.0e-15 85.1 146 40.4
MD12G1022600 Malus domestica HOM05D004666 ORTHO05D005822 5.2e-15 84.7 145 39.3
Sed0014063 Sechium edule HOM05D004666 ORTHO05D005822 5.2e-15 84.7 105 46.7
Aa31LG7G4140 Aethionema arabicum HOM05D004666 ORTHO05D005822 8.8e-15 84.0 52 73.1
C08p19490 Brassica napus HOM05D004666 ORTHO05D005822 1.2e-14 83.6 118 44.1
ECA248G2596 Erigeron canadensis HOM05D004666 ORTHO05D005822 1.2e-14 83.6 78 53.8
CsaV3_3G037120 Cucumis sativus L. HOM05D004666 ORTHO05D005822 1.5e-14 83.2 122 41.8
HanXRQChr01g0029141 Helianthus annuus HOM05D004666 ORTHO05D005822 2.6e-14 82.4 94 48.9
Lj2C133G10 Lonicera japonica HOM05D004666 ORTHO05D005822 2.6e-14 82.4 63 58.7
Os02g0307300 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 3.4e-14 82.0 57 63.2
ECA248G3102 Erigeron canadensis HOM05D004666 ORTHO05D005822 1.3e-13 80.1 101 46.5
SGA_v2.0_scaffold147G36363 Striga asiatica HOM05D004666 ORTHO05D005822 1.3e-13 80.1 94 46.8
Sabra06G0024800 Salix brachista HOM05D004666 ORTHO05D005822 4.8e-13 78.2 102 47.1
SalBow3G3865 Salvia bowleyana HOM05D004666 ORTHO05D005822 1.1e-12 77.0 47 63.8
Migut.J00966 Erythranthe guttata HOM05D004666 ORTHO05D005822 1.2e-11 73.6 101 39.6
HPP92_015079 Vanilla planifolia HOM05D004666 ORTHO05D005822 2.0e-11 72.8 98 45.9
Zm00001eb147330 Zea mays HOM05D004666 ORTHO05D005822 3.5e-11 72.0 51 58.8
SEGI_32780 Sequoiadendron giganteum HOM05D004666 ORTHO05D005822 1.3e-10 70.1 110 42.7
Sabra16G0037300 Salix brachista HOM05D004666 ORTHO05D017783 9.5e-09 63.9 33 84.8
unitig_749.g14294 Utricularia gibba HOM05D004666 ORTHO05D005822 4.7e-08 61.6 53 47.2
Pp3c1_31470 Physcomitrium patens HOM05D004666 ORTHO05D005822 6.1e-08 61.2 90 35.6
Mapoly0021s0027 Marchantia polymorpha HOM05D004666 ORTHO05D005822 2.0e-06 56.2 39 53.8
AagrBONN_evm.TU.Sc2ySwM_344.3422 Anthoceros agrestis HOM05D004666 ORTHO05D005822 3.4e-06 55.5 40 55.0


User provided reference genes

Program Settings