Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 1.0e-55 219.9 116 100.0
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 3.7e-50 201.4 116 90.5
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 4.5e-48 194.5 116 86.2
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 7.7e-48 193.7 117 88.0
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 1.7e-47 192.6 112 90.2
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 1.4e-46 189.5 117 82.1
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 3.2e-46 188.3 116 81.9
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 5.5e-46 187.6 109 89.0
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 9.4e-46 186.8 117 82.9
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 1.6e-45 186.0 117 83.8
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 2.7e-45 185.3 116 79.3
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 7.9e-45 183.7 117 82.1
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 2.3e-44 182.2 107 85.0
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 3.0e-44 181.8 116 81.9
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 8.8e-44 180.3 112 82.1
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 2.5e-43 178.7 103 90.3
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 3.3e-43 178.3 112 79.5
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 4.3e-43 177.9 116 78.4
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 9.7e-43 176.8 112 81.2
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 1.7e-42 176.0 111 81.1
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 2.8e-42 175.3 116 75.9
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 2.8e-42 175.3 117 77.8
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 4.8e-42 174.5 116 76.7
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 6.3e-42 174.1 117 74.4
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 6.3e-42 174.1 111 79.3
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 6.3e-42 174.1 111 80.2
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 6.3e-42 174.1 113 76.1
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 8.2e-42 173.7 111 78.4
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 8.2e-42 173.7 112 78.6
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 8.2e-42 173.7 116 76.7
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.1e-41 173.3 115 76.5
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 1.1e-41 173.3 113 77.9
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 1.1e-41 173.3 111 77.5
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 1.8e-41 172.6 109 80.7
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 1.8e-41 172.6 111 79.3
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 1.8e-41 172.6 111 79.3
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 2.4e-41 172.2 116 77.6
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 2.4e-41 172.2 111 79.3
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 2.4e-41 172.2 111 79.3
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 3.1e-41 171.8 118 76.3
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 3.1e-41 171.8 110 79.1
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 3.1e-41 171.8 116 77.6
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 3.1e-41 171.8 110 80.9
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 3.1e-41 171.8 111 79.3
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 3.1e-41 171.8 113 77.0
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 9.1e-41 170.2 116 76.7
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 1.2e-40 169.9 112 76.8
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 2.0e-40 169.1 112 75.0
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 2.6e-40 168.7 110 77.3
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 2.6e-40 168.7 112 74.1
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 2.6e-40 168.7 116 75.0
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 3.4e-40 168.3 116 75.0
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 4.5e-40 167.9 108 79.6
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 4.5e-40 167.9 116 74.1
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 5.9e-40 167.5 113 76.1
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 7.7e-40 167.2 112 75.9
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 1.0e-39 166.8 111 77.5
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 1.0e-39 166.8 116 75.9
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 1.0e-39 166.8 111 76.6
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 1.3e-39 166.4 112 73.2
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 1.7e-39 166.0 112 74.1
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 1.7e-39 166.0 112 73.2
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 2.2e-39 165.6 112 73.2
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 2.2e-39 165.6 112 73.2
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 2.2e-39 165.6 112 73.2
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 2.2e-39 165.6 112 73.2
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 2.2e-39 165.6 112 73.2
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 2.2e-39 165.6 116 72.4
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 2.9e-39 165.2 109 76.1
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 2.9e-39 165.2 112 74.1
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 3.8e-39 164.9 115 73.0
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 3.8e-39 164.9 117 73.5
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 8.5e-39 163.7 112 75.0
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 2.5e-38 162.2 113 70.8
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 4.2e-38 161.4 113 73.5
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 4.2e-38 161.4 113 72.6
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 5.5e-38 161.0 113 73.5
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 7.2e-38 160.6 107 74.8
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 1.6e-37 159.5 112 71.4
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 2.7e-37 158.7 111 73.9
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 3.6e-37 158.3 115 72.2
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 1.5e-35 152.9 115 69.6
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 2.0e-35 152.5 138 61.6
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 2.0e-35 152.5 114 67.5
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 9.7e-35 150.2 86 89.5
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 4.8e-34 147.9 105 72.4
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 1.1e-33 146.7 96 76.0
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.8e-33 146.0 96 82.3
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 1.8e-33 146.0 90 85.6
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 3.1e-33 145.2 92 79.3
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 9.1e-33 143.7 88 80.7
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 1.5e-32 142.9 105 74.3
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 2.6e-32 142.1 100 80.0
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 3.5e-32 141.7 89 82.0
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 1.3e-31 139.8 89 83.1
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 1.7e-31 139.4 171 48.5
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 2.2e-31 139.0 89 79.8
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 6.5e-31 137.5 87 81.6
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.5e-30 136.3 86 81.4
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 4.2e-30 134.8 85 81.2
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 3.6e-29 131.7 89 78.7
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 1.0e-28 130.2 88 75.0
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 1.4e-28 129.8 83 77.1
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 5.7e-27 124.4 79 78.5
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 9.7e-27 123.6 72 84.7
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 1.8e-25 119.4 118 57.6
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 7.2e-22 107.5 79 70.9
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 1.6e-21 106.3 64 84.4
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 6.1e-21 104.4 89 57.3
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 3.7e-18 95.1 108 50.0
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 3.5e-16 88.6 70 62.9
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 5.9e-16 87.8 109 53.2
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 1.3e-15 86.7 61 75.4
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.3e-15 86.7 52 78.8
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.3e-15 86.7 52 80.8
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 5.0e-15 84.7 58 79.3
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 5.2e-12 74.7 77 49.4
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 1.8e-09 66.2 107 39.3


User provided reference genes

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