Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 5.0e-143 511.1 269 100.0
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 2.4e-89 332.8 276 68.5
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 8.1e-85 317.8 296 64.2
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 1.1e-81 307.4 264 68.9
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 2.1e-77 293.1 273 60.4
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 1.1e-76 290.8 260 64.2
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 1.4e-76 290.4 258 64.7
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 2.4e-76 289.7 271 67.2
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 6.9e-76 288.1 177 81.9
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 1.0e-74 284.3 271 61.3
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 1.0e-74 284.3 261 60.5
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 1.3e-74 283.9 265 62.6
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 5.0e-74 282.0 276 61.6
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 6.5e-74 281.6 279 58.4
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 1.9e-73 280.0 265 62.6
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 2.5e-73 279.6 177 76.8
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 5.5e-73 278.5 277 59.6
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 9.3e-73 277.7 290 61.0
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 1.6e-72 276.9 179 79.3
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 1.6e-72 276.9 268 58.6
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 2.7e-72 276.2 179 77.7
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 3.6e-72 275.8 211 68.2
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 3.6e-72 275.8 278 60.8
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 4.6e-72 275.4 245 64.9
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 1.0e-71 274.2 177 76.8
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 1.3e-71 273.9 177 75.1
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 1.8e-71 273.5 265 58.1
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 3.0e-71 272.7 211 66.8
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 5.1e-71 271.9 264 57.6
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 6.7e-71 271.6 276 57.2
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 1.5e-70 270.4 278 58.6
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 1.5e-70 270.4 270 59.6
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 2.5e-70 269.6 267 59.6
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 4.3e-70 268.9 271 58.7
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 7.4e-70 268.1 212 65.6
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 1.6e-69 266.9 273 58.6
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 1.6e-69 266.9 288 56.2
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 2.8e-69 266.2 224 63.4
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 2.8e-69 266.2 270 58.5
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 2.8e-69 266.2 213 65.3
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 3.7e-69 265.8 178 74.7
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 4.8e-69 265.4 251 56.6
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 6.3e-69 265.0 167 77.2
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 1.4e-68 263.8 191 70.7
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 1.4e-68 263.8 256 60.5
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 1.8e-68 263.5 288 55.9
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 3.1e-68 262.7 178 74.2
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 6.9e-68 261.5 229 61.6
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 9.1e-68 261.2 273 54.2
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 9.1e-68 261.2 277 55.6
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 1.5e-67 260.4 238 60.5
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 1.5e-67 260.4 177 73.4
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 7.7e-67 258.1 176 71.0
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 1.0e-66 257.7 234 58.1
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 1.0e-66 257.7 177 72.9
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 2.2e-66 256.5 212 64.2
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 2.2e-66 256.5 259 58.3
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 5.0e-66 255.4 176 70.5
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 6.5e-66 255.0 202 65.3
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 6.5e-66 255.0 274 54.4
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 1.4e-65 253.8 177 71.2
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.9e-65 253.4 262 55.7
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 2.5e-65 253.1 177 70.6
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 2.5e-65 253.1 227 59.9
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 3.2e-65 252.7 177 69.5
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 4.2e-65 252.3 274 55.5
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 4.2e-65 252.3 275 55.6
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 6.1e-64 248.4 177 70.1
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 6.1e-64 248.4 259 56.4
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 7.9e-64 248.1 255 56.1
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 1.4e-63 247.3 268 55.2
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 3.0e-63 246.1 268 56.3
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 6.7e-63 245.0 261 57.9
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 1.1e-62 244.2 228 58.8
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 1.1e-62 244.2 257 58.0
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 2.0e-62 243.4 279 52.3
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 7.4e-62 241.5 169 72.2
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 9.7e-62 241.1 239 56.5
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 1.3e-61 240.7 273 54.2
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 1.7e-61 240.4 177 71.2
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 3.7e-61 239.2 285 53.0
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 6.9e-60 235.0 297 49.8
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 6.9e-60 235.0 179 67.6
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 7.7e-59 231.5 175 62.3
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 3.8e-58 229.2 221 64.3
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 5.5e-57 225.3 178 64.0
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 2.7e-56 223.0 246 51.6
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 6.1e-56 221.9 182 63.2
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 1.0e-55 221.1 139 77.0
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 1.4e-55 220.7 279 56.3
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 8.8e-55 218.0 250 50.8
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 8.2e-53 211.5 268 54.1
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 1.2e-51 207.6 196 55.6
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 1.2e-51 207.6 321 43.3
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 1.5e-49 200.7 176 55.7
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 3.3e-46 189.5 179 50.3
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 4.8e-45 185.7 178 51.1
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 2.4e-44 183.3 160 60.0
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 2.0e-43 180.3 163 57.1
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 2.1e-40 170.2 187 55.6
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 3.6e-40 169.5 181 49.2
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 4.0e-39 166.0 198 53.0
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 4.7e-32 142.5 84 82.1
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 4.7e-32 142.5 160 53.8
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 6.1e-32 142.1 151 51.0
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 3.8e-26 122.9 93 66.7
MCO05G240 Micromonas commoda HOM05D007224 ORTHO05D009169 3.0e-23 113.2 153 41.8
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 8.9e-23 111.7 76 67.1
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 1.7e-21 107.5 65 80.0
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 8.0e-16 88.6 95 51.6
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 2.4e-12 77.0 48 81.2


User provided reference genes

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