Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 4.2e-203 711.1 345 100.0
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 2.0e-200 702.2 345 98.8
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 1.2e-160 570.1 344 78.5
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 1.3e-159 566.6 345 77.7
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.7e-159 566.2 344 78.2
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 3.5e-157 558.5 345 77.1
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 1.3e-156 556.6 346 76.0
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 6.6e-156 554.3 345 75.9
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 7.3e-155 550.8 346 76.9
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 1.6e-154 549.7 337 76.3
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 6.2e-154 547.7 339 75.5
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 6.2e-154 547.7 344 76.2
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 1.2e-152 543.5 348 77.0
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 1.5e-152 543.1 345 76.5
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 3.4e-152 542.0 345 75.7
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 4.5e-152 541.6 344 75.9
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 9.9e-152 540.4 345 73.6
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 2.2e-151 539.3 345 73.3
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 2.9e-151 538.9 344 75.0
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 4.9e-151 538.1 344 75.0
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 1.1e-150 537.0 344 73.3
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 1.9e-150 536.2 344 75.9
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 3.2e-150 535.4 346 75.4
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 4.2e-150 535.0 345 73.0
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 4.2e-150 535.0 344 75.9
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 9.3e-150 533.9 346 75.4
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 9.3e-150 533.9 347 74.9
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 1.2e-149 533.5 344 74.7
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 1.6e-149 533.1 344 75.0
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 2.1e-149 532.7 338 75.1
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 2.7e-149 532.3 343 74.1
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 3.5e-149 531.9 338 75.4
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 4.6e-149 531.6 344 73.3
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 7.9e-149 530.8 344 73.5
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 1.0e-148 530.4 345 73.9
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 1.0e-148 530.4 339 74.3
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 1.3e-148 530.0 348 73.0
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 2.3e-148 529.3 345 73.6
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 3.9e-148 528.5 375 71.2
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 3.9e-148 528.5 339 73.5
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 8.7e-148 527.3 340 74.4
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 1.5e-147 526.6 338 74.0
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 2.5e-147 525.8 344 73.8
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 4.3e-147 525.0 340 74.1
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 7.4e-147 524.2 347 74.6
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 2.1e-146 522.7 344 72.7
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 4.8e-146 521.5 344 73.5
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 6.2e-146 521.2 340 72.4
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 6.2e-146 521.2 347 72.9
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 1.8e-145 519.6 346 72.5
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 2.4e-145 519.2 347 72.3
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 3.1e-145 518.8 363 71.3
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 4.0e-145 518.5 344 72.7
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 5.3e-145 518.1 328 75.6
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 6.9e-145 517.7 345 72.5
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 9.0e-145 517.3 344 72.7
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 2.6e-144 515.8 347 71.5
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 5.8e-144 514.6 343 71.4
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 7.6e-144 514.2 375 67.7
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 9.9e-144 513.8 347 72.6
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 1.3e-143 513.5 344 72.1
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 2.2e-143 512.7 343 70.8
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 3.8e-143 511.9 347 72.3
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 8.4e-143 510.8 346 71.4
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 1.4e-142 510.0 352 70.5
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 4.2e-142 508.4 346 72.0
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 9.3e-142 507.3 282 86.2
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 9.3e-142 507.3 347 72.6
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 2.7e-141 505.8 350 72.0
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 6.0e-141 504.6 347 71.5
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 7.9e-141 504.2 349 72.2
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 1.3e-140 503.4 345 71.0
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 3.0e-140 502.3 349 73.4
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 8.7e-140 500.7 404 62.9
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 1.5e-139 500.0 346 70.2
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 2.1e-138 496.1 340 69.1
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 6.2e-138 494.6 351 67.8
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 6.2e-138 494.6 334 73.4
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 8.1e-138 494.2 345 69.6
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 2.4e-137 492.7 351 67.5
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 3.4e-136 488.8 349 69.6
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 4.5e-136 488.4 346 69.9
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 2.9e-135 485.7 350 69.1
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 2.9e-135 485.7 350 69.1
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 6.5e-135 484.6 350 69.1
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 1.1e-134 483.8 292 78.4
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 1.4e-134 483.4 343 68.8
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 5.5e-134 481.5 351 68.1
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 9.3e-134 480.7 348 69.5
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 1.6e-133 479.9 328 71.3
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 2.7e-133 479.2 347 68.9
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 1.1e-131 473.8 345 67.8
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 1.5e-131 473.4 345 68.1
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 8.2e-130 467.6 347 66.6
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 1.1e-129 467.2 301 75.7
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 1.1e-129 467.2 344 66.6
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 1.4e-129 466.8 343 66.2
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 3.1e-129 465.7 344 64.0
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 4.1e-129 465.3 350 65.4
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 5.3e-129 464.9 324 69.8
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 6.3e-122 441.4 334 66.8
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 8.5e-119 431.0 247 81.4
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 4.2e-118 428.7 234 85.0
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 9.4e-118 427.6 251 81.7
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 3.6e-117 425.6 333 63.7
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 2.4e-113 412.9 249 76.7
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 5.0e-111 405.2 249 75.5
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 1.1e-105 387.5 305 62.0
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 7.7e-104 381.3 330 60.3
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 2.0e-99 366.7 333 58.9
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 2.2e-98 363.2 328 56.4
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 8.5e-95 351.3 239 72.4
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 3.2e-94 349.4 232 72.0
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 2.1e-93 346.7 241 69.7
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 2.1e-93 346.7 240 70.8
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 2.7e-93 346.3 241 69.7
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 9.8e-91 337.8 240 68.3
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 2.2e-87 326.6 326 52.5
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 7.5e-83 311.6 244 60.2
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 1.8e-68 263.8 173 71.7
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 3.9e-63 246.1 199 61.8
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.5e-62 244.2 163 71.2
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 5.6e-62 242.3 199 61.8
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 2.3e-60 236.9 246 47.6
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 8.6e-55 218.4 205 51.7
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 2.0e-51 207.2 180 57.8
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 7.8e-48 195.3 172 59.3
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 2.6e-27 127.1 73 82.2
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 2.9e-26 123.6 79 72.2
CDE04G1521 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 5.5e-17 92.8 57 68.4
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 1.4e-09 68.2 53 62.3


User provided reference genes

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