Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049721 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.4e-61 236.9 123 100.0
CSS0011556 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-32 142.5 82 86.6
CSS0036042 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-29 132.9 88 77.3
CSS0000891 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-15 86.7 46 87.0
CSS0004182 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-15 86.7 46 87.0
CSS0010423 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-15 86.7 46 87.0
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-15 86.7 176 36.4
CSS0033025 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-15 86.7 46 87.0
CSS0033950 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-15 86.7 46 87.0
CSS0041437 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-15 86.7 46 87.0
CSS0001339 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.4e-15 85.9 46 84.8
CSS0013618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.4e-15 85.9 44 84.1
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.1e-15 85.1 46 84.8
CSS0003542 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.1e-15 85.1 46 84.8
CSS0008214 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.1e-15 85.1 46 84.8
CSS0027060 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.1e-15 85.1 46 84.8
CSS0037011 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.1e-15 85.1 46 84.8
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.1e-15 85.1 46 84.8
CSS0046119 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.1e-15 85.1 46 84.8
CSS0018539 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.1e-15 84.0 44 86.4
CSS0028601 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-14 83.6 46 82.6
CSS0041327 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-14 83.6 46 82.6
CSS0044969 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-14 83.6 46 82.6
CSS0005185 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-14 83.2 44 86.4
CSS0040160 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-14 83.2 44 86.4
CSS0042015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-14 83.2 44 86.4
CSS0009064 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.6e-14 82.4 43 86.0
CSS0007522 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.4e-14 82.0 46 82.6
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 6.1e-11 71.2 107 44.9
vmacro22380 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 2.8e-08 62.4 61 47.5
CSS0002487 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.3e-08 61.2 45 57.8
CSS0012893 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.3e-08 61.2 45 57.8
CSS0020953 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.3e-08 61.2 45 57.8
CSS0042621 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.3e-08 61.2 44 59.1
CSS0048721 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.3e-08 61.2 45 57.8
Rhsim01G0079300 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.1e-07 60.5 53 45.3
CSS0007177 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.4e-07 59.3 45 57.8
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-07 59.3 55 45.5
Rhsim09G0006300 Rhododendron simsii HOM05D005012 ORTHO05D005886 3.1e-07 58.9 49 51.0
CSS0032614 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.0e-07 57.8 45 53.3
CSS0046965 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.0e-07 57.8 49 59.2
Rhsim05G0112900 Rhododendron simsii HOM05D005012 ORTHO05D005886 7.0e-07 57.8 42 54.8
Rhsim09G0115800 Rhododendron simsii HOM05D005012 ORTHO05D005886 7.0e-07 57.8 42 54.8
Rhsim01G0079900 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.2e-06 57.0 48 45.8
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.6e-06 55.8 33 72.7
Rhsim07G0133200 Rhododendron simsii HOM05D005012 ORTHO05D005886 3.4e-06 55.5 38 57.9
RcHm_v2.0_Chr3g0475981 Rosa chinensis HOM05D005012 ORTHO05D005886 7.7e-06 54.3 47 53.2


User provided reference genes

Program Settings