Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049708 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.1e-68 260.8 139 100.0
CSS0014430 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-37 159.1 121 70.2
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.0e-35 151.8 137 58.4
Lju225C4G4 Lonicera japonica HOM05D000002 ORTHO05D000001 4.4e-34 148.3 147 56.5
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.9e-33 145.6 137 55.5
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.4e-33 144.4 137 56.9
Rhsim02G0101600 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.4e-32 142.5 138 53.6
CSS0016107 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-31 139.0 138 54.3
Lju225C0G8 Lonicera japonica HOM05D000002 ORTHO05D000001 1.0e-30 137.1 117 59.0
CSS0046748 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-29 131.3 128 53.1
CSS0025416 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.7e-28 128.3 139 51.1
CSS0021158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-24 116.7 138 52.9
CSS0003386 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-21 105.1 97 52.6
CSS0007773 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-20 102.1 106 49.1
Rhsim06G0125700 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.1e-19 99.0 107 46.7
MSTRG.19383 Avicennia marina HOM05D000073 ORTHO05D000033 3.4e-18 95.5 90 53.3
CSS0029429 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.8e-18 94.7 109 45.9
CSS0039702 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.4e-17 90.9 120 47.5
CAN.G447.8 Capsicum annuum HOM05D000002 ORTHO05D000001 1.4e-16 90.1 85 51.8
CSS0045870 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-15 85.5 128 39.8
CSS0034941 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.8e-15 84.3 128 39.8
Prupe.4G199600 Prunus persica HOM05D000002 ORTHO05D000001 3.9e-14 82.0 123 35.8
QL08p052300 Quercus lobata HOM05D000002 ORTHO05D000001 6.6e-14 81.3 123 37.4
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 1.9e-13 79.7 117 35.9
MD00G1084700 Malus domestica HOM05D000002 ORTHO05D000001 2.5e-13 79.3 118 33.9
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.3e-13 78.6 123 35.0
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.3e-13 78.6 123 35.0
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.3e-13 78.6 123 33.3
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.3e-13 78.6 120 35.0
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.3e-12 77.0 123 35.0
Sopen07g003750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-12 77.0 137 31.4
PSO541G1536 Papaver somniferum HOM05D000002 ORTHO05D000001 1.6e-12 76.6 122 35.2
RcHm_v2.0_Chr7g0190501 Rosa chinensis HOM05D000002 ORTHO05D000001 2.1e-12 76.3 133 36.1
TAR541G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.1e-12 76.3 137 32.8
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.8e-12 75.1 123 30.9
CSS0050038 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.2e-12 74.7 114 40.4
TAR650G0001 Trochodendron aralioides HOM05D000067 ORTHO05D000001 6.2e-12 74.7 123 36.6
SGA_v2.0_scaffold31G12742 Striga asiatica HOM05D000073 ORTHO05D000033 8.1e-12 74.3 90 43.3
PSO754G0020 Papaver somniferum HOM05D000002 ORTHO05D000001 1.8e-11 73.2 125 32.8
Gorai.008G092500 Gossypium raimondii HOM05D000002 ORTHO05D000001 6.9e-11 71.2 123 33.3
Hma1.2p1_0948F.1_g240460 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-10 70.1 123 39.0
MD12G1020900 Malus domestica HOM05D000103 ORTHO05D000001 2.0e-10 69.7 124 33.9
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 3.4e-10 68.9 137 31.4
Peaxi162Scf00063g00071 Petunia axillaris HOM05D000002 ORTHO05D000001 4.4e-10 68.6 132 32.6
TPR.G7779 Trifolium pratense HOM05D000002 ORTHO05D000001 4.4e-10 68.6 123 30.9
CAN.G1859.1 Capsicum annuum HOM05D001133 ORTHO05D000941 5.8e-10 68.2 105 33.3
Peaxi162Scf00168g01729 Petunia axillaris HOM05D000002 ORTHO05D000001 5.8e-10 68.2 132 32.6
Lj2P1186T25 Lonicera japonica HOM05D000002 ORTHO05D000001 7.6e-10 67.8 57 54.4
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 7.6e-10 67.8 120 32.5
RcHm_v2.0_Chr2g0129181 Rosa chinensis HOM05D000002 ORTHO05D000001 7.6e-10 67.8 136 33.1
COL.COLO4_12289 Corchorus olitorius HOM05D000002 ORTHO05D000001 9.9e-10 67.4 122 30.3
Sopen08g014470 Solanum pennellii HOM05D002431 ORTHO05D000001 9.9e-10 67.4 128 32.0
MD05G1333300 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-09 66.6 118 33.9
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-09 66.6 120 36.7
Psat7g220520 Pisum sativum HOM05D000002 ORTHO05D000001 1.7e-09 66.6 123 31.7
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.2e-09 66.2 103 35.9
CSS0043017 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-09 65.9 76 43.4
Atru.chr13.248 Acer truncatum HOM05D000002 ORTHO05D000001 3.8e-09 65.5 124 29.0
Migut.E01660 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.8e-09 65.5 131 32.1
Migut.G00019 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.8e-09 65.5 130 32.3
MD07G1259300 Malus domestica HOM05D000002 ORTHO05D000157 3.8e-09 65.5 137 32.1
Migut.G01154 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.9e-09 65.1 133 30.8
Migut.C00657 Erythranthe guttata HOM05D000002 ORTHO05D000001 6.4e-09 64.7 122 32.8
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.4e-09 64.7 123 37.4
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 6.4e-09 64.7 136 31.6
Atru.chr2.3010 Acer truncatum HOM05D000002 ORTHO05D000001 8.4e-09 64.3 124 29.0
Cpa.g.sc188.27 Carica papaya HOM05D058748 ORTHO05D000001 1.1e-08 63.9 124 33.1
Migut.J01067 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.9e-08 63.2 137 31.4
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-08 63.2 135 36.3
Migut.E01000 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.4e-08 62.8 143 29.4
Peaxi162Scf00153g01013 Petunia axillaris HOM05D000002 ORTHO05D000001 2.4e-08 62.8 122 32.8
SGA_v2.0_scaffold2G01302 Striga asiatica HOM05D000033 ORTHO05D001614 2.4e-08 62.8 122 32.0
Hma1.2p1_1307F.1_g274730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.2e-08 62.4 123 35.8
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 3.2e-08 62.4 134 27.6
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.2e-08 62.4 119 30.3
TAR549G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.2e-08 62.4 115 31.3
ClCG02G008400 Citrullus lanatus HOM05D000034 ORTHO05D000001 4.2e-08 62.0 124 29.0
HanXRQChr14g0457051 Helianthus annuus HOM05D000002 ORTHO05D000001 4.2e-08 62.0 121 33.9
Atru.chr6.1166 Acer truncatum HOM05D000002 ORTHO05D000001 7.1e-08 61.2 140 28.6
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 7.1e-08 61.2 134 27.6
GSVIVG01016108001 Vitis vinifera HOM05D000002 ORTHO05D000001 7.1e-08 61.2 123 26.0
THA.LOC104818098 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.2e-07 60.5 138 31.2
TWI63G0191 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.6e-07 60.1 118 28.0
Atru.chr2.1455 Acer truncatum HOM05D000002 ORTHO05D000001 2.7e-07 59.3 123 30.9
Dinv08503 Davidia involucrata HOM05D000002 ORTHO05D000001 3.5e-07 58.9 123 32.5
ECA247G0128 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-07 58.9 100 34.0
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 3.5e-07 58.9 123 31.7
ECA247G3681 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-07 58.5 100 34.0
Hma1.2p1_0240F.1_g100250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.6e-07 58.5 107 32.7
Lalb_Chr05g0228251 Lupinus albus HOM05D008404 ORTHO05D000001 4.6e-07 58.5 122 30.3
Sabra01G0140600 Salix brachista HOM05D000002 ORTHO05D000001 4.6e-07 58.5 101 32.7
ECA240G0774 Erigeron canadensis HOM05D000004 ORTHO05D000001 6.0e-07 58.2 128 34.4
PSO339G3901 Papaver somniferum HOM05D000002 ORTHO05D000001 6.0e-07 58.2 118 31.4
PSO782G0612 Papaver somniferum HOM05D000002 ORTHO05D000001 6.0e-07 58.2 110 30.0
HanXRQChr03g0064201 Helianthus annuus HOM05D000002 ORTHO05D000001 7.9e-07 57.8 121 30.6
PSO063G5384 Papaver somniferum HOM05D000002 ORTHO05D000001 7.9e-07 57.8 123 30.1
TWI77G0605 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 7.9e-07 57.8 67 43.3
Atru.chr2.1090 Acer truncatum HOM05D000034 ORTHO05D000001 1.0e-06 57.4 123 28.5
Atru.chr10.264 Acer truncatum HOM05D000002 ORTHO05D000001 1.3e-06 57.0 123 25.2
COL.COLO4_23623 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.3e-06 57.0 120 33.3
ECA246G2563 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-06 57.0 121 32.2
Lalb_Chr06g0171641 Lupinus albus HOM05D000002 ORTHO05D000001 1.3e-06 57.0 122 28.7
Rhsim03G0160800 Rhododendron simsii HOM05D029833 ORTHO05D000001 1.3e-06 57.0 126 31.0
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 1.3e-06 57.0 123 30.9
CSS0011046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-06 56.6 123 26.8
Peaxi162Scf00203g00072 Petunia axillaris HOM05D000002 ORTHO05D000001 1.7e-06 56.6 122 27.0
Sabra16G0137700 Salix brachista HOM05D000002 ORTHO05D000001 1.7e-06 56.6 101 31.7
Actinidia04430 Actinidia chinensis HOM05D000002 ORTHO05D000001 2.3e-06 56.2 118 26.3
COL.COLO4_25328 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.3e-06 56.2 109 33.0
HanXRQChr14g0429151 Helianthus annuus HOM05D000002 ORTHO05D000001 2.3e-06 56.2 135 30.4
Sabra17G0101800 Salix brachista HOM05D000002 ORTHO05D000001 2.3e-06 56.2 132 31.1
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 3.0e-06 55.8 123 29.3
Atru.chr4.1289 Acer truncatum HOM05D000002 ORTHO05D000001 3.0e-06 55.8 111 31.5
ECA240G3677 Erigeron canadensis HOM05D000031 ORTHO05D000030 3.0e-06 55.8 113 31.0
Psat7g134120 Pisum sativum HOM05D000002 ORTHO05D000001 3.0e-06 55.8 95 30.5
RcHm_v2.0_Chr2g0119341 Rosa chinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.8 140 32.1
Sabra05G0125000 Salix brachista HOM05D000002 ORTHO05D000001 3.0e-06 55.8 124 29.0
TPR.G32556 Trifolium pratense HOM05D000002 ORTHO05D000001 3.0e-06 55.8 123 28.5
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.9e-06 55.5 123 30.9
Sopen09g023700 Solanum pennellii HOM05D000006 ORTHO05D000001 3.9e-06 55.5 114 31.6
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.9e-06 55.5 113 31.0
GSVIVG01036343001 Vitis vinifera HOM05D000067 ORTHO05D000097 3.9e-06 55.5 123 22.8
Atru.chr1.2464 Acer truncatum HOM05D000002 ORTHO05D000001 5.1e-06 55.1 112 29.5
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.1e-06 55.1 103 30.1
THA.LOC109116120 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.1e-06 55.1 123 27.6
ECA246G2243 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.6e-06 54.7 121 28.9
FvH4_3g07841 Fragaria vesca HOM05D000002 ORTHO05D000001 6.6e-06 54.7 123 29.3
Sabra16G0104200 Salix brachista HOM05D000002 ORTHO05D000001 6.6e-06 54.7 140 30.7
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 6.6e-06 54.7 135 27.4
HanXRQChr00c0303g0573321 Helianthus annuus HOM05D000002 ORTHO05D000001 8.7e-06 54.3 121 28.9
RcHm_v2.0_Chr3g0482021 Rosa chinensis HOM05D000002 ORTHO05D000001 8.7e-06 54.3 123 26.8
TPR.G5721 Trifolium pratense HOM05D000002 ORTHO05D000001 8.7e-06 54.3 120 25.8


User provided reference genes

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