Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049683 Camellia sinensis var. sinensis HOM05D006108 ORTHO05D007605 1.4e-43 179.1 86 100.0
Duzib248G0641 Durio zibethinus HOM05D006108 ORTHO05D007605 2.6e-29 131.7 72 84.7
COL.COLO4_07905 Corchorus olitorius HOM05D001580 ORTHO05D001517 1.0e-28 129.8 74 81.1
FAN07G1587 Fragaria x ananassa HOM05D006108 ORTHO05D007605 2.2e-28 128.6 77 76.6
RcHm_v2.0_Chr4g0435471 Rosa chinensis HOM05D006108 ORTHO05D007605 8.5e-28 126.7 72 80.6
MD13G1043700 Malus domestica HOM05D006108 ORTHO05D007605 1.9e-27 125.6 77 75.3
Potri.008G119200 Populus trichocarpa HOM05D006108 ORTHO05D007605 7.2e-27 123.6 78 70.5
Ciclev10033455m.g Citrus clementina HOM05D006108 ORTHO05D007605 9.4e-27 123.2 70 84.3
FAN22G0059 Fragaria x ananassa HOM05D006108 ORTHO05D007605 1.2e-26 122.9 71 80.3
Gorai.008G184200 Gossypium raimondii HOM05D006108 ORTHO05D007605 1.2e-26 122.9 72 79.2
Dinv04481 Davidia involucrata HOM05D001580 ORTHO05D001517 3.6e-26 121.3 77 68.8
Dinv09807 Davidia involucrata HOM05D006108 ORTHO05D007605 3.6e-26 121.3 75 76.0
Gohir.A09G177600 Gossypium hirsutum HOM05D006108 ORTHO05D007605 3.6e-26 121.3 74 77.0
Gohir.D09G173100 Gossypium hirsutum HOM05D006108 ORTHO05D007605 3.6e-26 121.3 74 77.0
Gorai.006G195000 Gossypium raimondii HOM05D006108 ORTHO05D007605 3.6e-26 121.3 74 77.0
PGR102G2516 Punica granatum HOM05D006108 ORTHO05D007605 4.7e-26 120.9 76 76.3
Prupe.1G308800 Prunus persica HOM05D006108 ORTHO05D007605 6.1e-26 120.6 72 80.6
Oeu041896.1 Olea europaea HOM05D006108 ORTHO05D007605 8.0e-26 120.2 70 82.9
TWI79G0681 Tripterygium wilfordii HOM05D006108 ORTHO05D007605 1.4e-25 119.4 77 72.7
Sabra08G0090500 Salix brachista HOM05D006108 ORTHO05D007605 2.3e-25 118.6 74 71.6
TWI31G1391 Tripterygium wilfordii HOM05D006108 ORTHO05D007605 3.0e-25 118.2 77 72.7
FAN13G1808 Fragaria x ananassa HOM05D006108 ORTHO05D007605 4.0e-25 117.9 72 75.0
FAN18G0723 Fragaria x ananassa HOM05D006108 ORTHO05D007605 4.0e-25 117.9 72 75.0
FAN18G1336 Fragaria x ananassa HOM05D006108 ORTHO05D007605 4.0e-25 117.9 72 75.0
Rhsim12G0143800 Rhododendron simsii HOM05D006108 ORTHO05D007605 4.0e-25 117.9 78 69.2
RcHm_v2.0_Chr7g0185241 Rosa chinensis HOM05D006108 ORTHO05D007605 4.0e-25 117.9 72 75.0
CiPaw.15G083500 Carya illinoinensis HOM05D006108 ORTHO05D007605 5.2e-25 117.5 74 71.6
GSVIVG01008271001 Vitis vinifera HOM05D006108 ORTHO05D007605 5.2e-25 117.5 77 70.1
DCAR_026728 Daucus carota HOM05D006108 ORTHO05D007605 6.7e-25 117.1 74 73.0
Thecc.03G033400 Theobroma cacao HOM05D006108 ORTHO05D007605 6.7e-25 117.1 72 70.8
TPR.G38355 Trifolium pratense HOM05D006108 ORTHO05D007605 6.7e-25 117.1 72 73.6
PSO017G5628 Papaver somniferum HOM05D006108 ORTHO05D007605 8.8e-25 116.7 74 73.0
FvH4_5g12320 Fragaria vesca HOM05D006108 ORTHO05D007605 1.2e-24 116.3 72 73.6
Gohir.A12G168100 Gossypium hirsutum HOM05D006108 ORTHO05D007605 1.2e-24 116.3 68 80.9
TAR371G1266 Trochodendron aralioides HOM05D006108 ORTHO05D007605 1.2e-24 116.3 73 69.9
Atru.chr9.818 Acer truncatum HOM05D006108 ORTHO05D007605 1.5e-24 115.9 75 72.0
Manes.06G070100 Manihot esculenta HOM05D006108 ORTHO05D007605 1.5e-24 115.9 77 67.5
Actinidia35084 Actinidia chinensis HOM05D006108 ORTHO05D007605 2.0e-24 115.5 71 73.2
Eucgr.B03028 Eucalyptus grandis HOM05D006108 ORTHO05D007605 3.3e-24 114.8 78 67.9
QL01p043861 Quercus lobata HOM05D006108 ORTHO05D007605 3.3e-24 114.8 73 74.0
FAN08G0393 Fragaria x ananassa HOM05D006108 ORTHO05D007605 5.7e-24 114.0 72 72.2
Gohir.D12G171700 Gossypium hirsutum HOM05D006108 ORTHO05D007605 5.7e-24 114.0 68 79.4
Lsat_1_v5_gn_8_39200 Lactuca sativa HOM05D006108 ORTHO05D007605 5.7e-24 114.0 70 74.3
Oeu008040.1 Olea europaea HOM05D006108 ORTHO05D007605 5.7e-24 114.0 70 77.1
HanXRQChr02g0058721 Helianthus annuus HOM05D006108 ORTHO05D007605 9.7e-24 113.2 70 74.3
Sp2g15090 Schrenkiella parvula HOM05D006108 ORTHO05D007605 1.3e-23 112.8 78 61.5
Sc14g0007540 Simmondsia chinensis HOM05D006108 ORTHO05D007605 1.3e-23 112.8 73 72.6
Cfa019791 Carpinus fangiana HOM05D006108 ORTHO05D007605 1.7e-23 112.5 72 70.8
Ciclev10022919m.g Citrus clementina HOM05D006108 ORTHO05D007605 1.7e-23 112.5 76 68.4
Manes.14G100500 Manihot esculenta HOM05D006108 ORTHO05D007605 1.7e-23 112.5 74 68.9
Medtr5g055190 Medicago truncatula HOM05D006108 ORTHO05D007605 1.7e-23 112.5 71 71.8
Prupe.5G220300 Prunus persica HOM05D006108 ORTHO05D007605 1.7e-23 112.5 71 74.6
Gohir.A09G047400 Gossypium hirsutum HOM05D006108 ORTHO05D007605 2.2e-23 112.1 78 62.8
Gorai.006G061500 Gossypium raimondii HOM05D006108 ORTHO05D007605 2.2e-23 112.1 78 62.8
Duzib084G1067 Durio zibethinus HOM05D006108 ORTHO05D007605 2.8e-23 111.7 74 68.9
FAN12G0874 Fragaria x ananassa HOM05D006108 ORTHO05D007605 2.8e-23 111.7 78 70.5
Gohir.D09G048600 Gossypium hirsutum HOM05D006108 ORTHO05D007605 3.7e-23 111.3 77 63.6
MD06G1214900 Malus domestica HOM05D006108 ORTHO05D007605 3.7e-23 111.3 72 69.4
Manes.05G140027 Manihot esculenta HOM05D006108 ORTHO05D007605 3.7e-23 111.3 73 71.2
Phvul.003G034700 Phaseolus vulgaris HOM05D006108 ORTHO05D007605 3.7e-23 111.3 75 69.3
QL10p025064 Quercus lobata HOM05D006108 ORTHO05D007605 4.8e-23 110.9 70 74.3
BcaB07g30252 Brassica carinata HOM05D006108 ORTHO05D007605 6.3e-23 110.5 76 61.8
Lj2g0013090 Lotus japonicus HOM05D006108 ORTHO05D007605 6.3e-23 110.5 73 69.9
BcaC06g31111 Brassica carinata HOM05D006108 ORTHO05D007605 8.3e-23 110.2 78 57.7
Cc11_g10300 Coffea canephora HOM05D006108 ORTHO05D007605 1.1e-22 109.8 73 69.9
BcaC03g17291 Brassica carinata HOM05D006108 ORTHO05D007605 1.4e-22 109.4 78 60.3
A06p42440 Brassica napus HOM05D006108 ORTHO05D007605 1.4e-22 109.4 76 60.5
BolC2t11319H Brassica oleracea HOM05D006108 ORTHO05D007605 1.4e-22 109.4 78 60.3
BraA06t27159Z Brassica rapa HOM05D006108 ORTHO05D007605 1.4e-22 109.4 76 60.5
Glyma.01G082600 Glycine max HOM05D006108 ORTHO05D007605 1.4e-22 109.4 72 70.8
Glyma.09G185400 Glycine max HOM05D006108 ORTHO05D007605 1.8e-22 109.0 75 66.7
Glyma.07G090500 Glycine max HOM05D006108 ORTHO05D007605 2.4e-22 108.6 75 68.0
MD14G1225800 Malus domestica HOM05D006108 ORTHO05D007605 2.4e-22 108.6 68 72.1
Migut.L01077 Erythranthe guttata HOM05D006108 ORTHO05D007605 3.1e-22 108.2 69 75.4
AT3G25855 Arabidopsis thaliana HOM05D006108 ORTHO05D007605 4.1e-22 107.8 78 57.7
BcaC06g33947 Brassica carinata HOM05D006108 ORTHO05D007605 5.3e-22 107.5 72 62.5
Carub.0005s0368 Capsella rubella HOM05D006108 ORTHO05D007605 5.3e-22 107.5 78 55.1
MD16G1044500 Malus domestica HOM05D006108 ORTHO05D007605 5.3e-22 107.5 68 72.1
A02p34100 Brassica napus HOM05D006108 ORTHO05D007605 7.0e-22 107.1 78 59.0
Lj2g0017619 Lotus japonicus HOM05D006108 ORTHO05D007605 7.0e-22 107.1 75 65.3
THA.LOC104824033 Tarenaya hassleriana HOM05D006108 ORTHO05D007605 1.2e-21 106.3 71 67.6
BolC7t44019H Brassica oleracea HOM05D006108 ORTHO05D007605 1.6e-21 105.9 70 64.3
CsaV3_1G006560 Cucumis sativus L. HOM05D006108 ORTHO05D007605 1.6e-21 105.9 68 67.6
Sed0000256 Sechium edule HOM05D006108 ORTHO05D007605 1.6e-21 105.9 74 66.2
CARHR146800 Cardamine hirsuta HOM05D006108 ORTHO05D007605 2.0e-21 105.5 72 61.1
Thhalv10005176m.g Eutrema salsugineum HOM05D006108 ORTHO05D007605 2.0e-21 105.5 72 62.5
Psat6g222560 Pisum sativum HOM05D006108 ORTHO05D007605 2.0e-21 105.5 75 64.0
Sed0021850 Sechium edule HOM05D006108 ORTHO05D007605 2.0e-21 105.5 72 65.3
AL5G14490 Arabidopsis lyrata HOM05D006108 ORTHO05D007605 2.7e-21 105.1 78 57.7
C07p34870 Brassica napus HOM05D006108 ORTHO05D007605 2.7e-21 105.1 72 61.1
Nn3g17803 Nelumbo nucifera HOM05D006108 ORTHO05D007605 2.7e-21 105.1 69 68.1
Nn4g23806 Nelumbo nucifera HOM05D006108 ORTHO05D007605 3.5e-21 104.8 68 66.2
Psat2g097920 Pisum sativum HOM05D006108 ORTHO05D007605 3.5e-21 104.8 68 73.5
TPR.G35239 Trifolium pratense HOM05D006108 ORTHO05D007605 5.9e-21 104.0 75 64.0
Eucgr.B00718 Eucalyptus grandis HOM05D006108 ORTHO05D007605 7.7e-21 103.6 76 60.5
Phvul.004G158700 Phaseolus vulgaris HOM05D006108 ORTHO05D007605 7.7e-21 103.6 75 62.7
CiPaw.15G129300 Carya illinoinensis HOM05D006108 ORTHO05D007605 1.0e-20 103.2 72 70.8
Nitab4.5_0001914g0010 Nicotiana tabacum HOM05D006108 ORTHO05D007605 1.3e-20 102.8 67 71.6
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 1.3e-20 102.8 74 63.5
Nitab4.5_0003285g0040 Nicotiana tabacum HOM05D006108 ORTHO05D007605 1.7e-20 102.4 67 71.6
C02p52370 Brassica napus HOM05D006108 ORTHO05D007605 2.9e-20 101.7 72 61.1
CAN.G388.38 Capsicum annuum HOM05D006108 ORTHO05D007605 2.9e-20 101.7 75 64.0
Lalb_Chr10g0099931 Lupinus albus HOM05D006108 ORTHO05D007605 2.9e-20 101.7 68 69.1
CDE05G0497 Ceratophyllum demersum HOM05D006108 ORTHO05D007605 5.0e-20 100.9 68 69.1
Sopen03g038460 Solanum pennellii HOM05D006108 ORTHO05D007605 6.5e-20 100.5 74 64.9
PGSC0003DMG402005714 Solanum tuberosum HOM05D006108 ORTHO05D007605 1.1e-19 99.8 75 62.7
BraA02t08427Z Brassica rapa HOM05D006108 ORTHO05D007605 1.5e-19 99.4 72 59.7
CsaV3_6G003400 Cucumis sativus L. HOM05D006108 ORTHO05D007605 2.5e-19 98.6 73 61.6
Zm00001eb099300 Zea mays HOM05D006108 ORTHO05D007605 3.2e-19 98.2 81 58.0
Nitab4.5_0001599g0060 Nicotiana tabacum HOM05D006108 ORTHO05D007605 1.6e-18 95.9 71 64.8
Nitab4.5_0004412g0100 Nicotiana tabacum HOM05D006108 ORTHO05D007605 1.6e-18 95.9 71 64.8
Os09g0408550 Oryza sativa ssp. japonica HOM05D006108 ORTHO05D007605 1.6e-18 95.9 68 63.2
arahy.Tifrunner.gnm1.ann1.1V8BDZ Arachis hypogaea HOM05D006108 ORTHO05D007605 2.7e-18 95.1 70 65.7
arahy.Tifrunner.gnm1.ann1.L19XPP Arachis hypogaea HOM05D006108 ORTHO05D007605 2.7e-18 95.1 70 65.7
Cpa.g.sc1.185 Carica papaya HOM05D006108 ORTHO05D007605 3.6e-18 94.7 55 80.0
Rhsim09G0109500 Rhododendron simsii HOM05D006290 ORTHO05D007734 1.8e-17 92.4 51 84.3
HPP92_026959 Vanilla planifolia HOM05D006108 ORTHO05D007605 3.0e-17 91.7 77 54.5
Sopen05g012490 Solanum pennellii HOM05D006108 ORTHO05D007605 5.2e-17 90.9 68 64.7
ECA233G5877 Erigeron canadensis HOM05D006108 ORTHO05D007605 7.0e-14 80.5 53 71.7
Hund05757 Selenicereus undatus HOM05D006108 ORTHO05D007605 8.6e-12 73.6 45 75.6
arahy.Tifrunner.gnm1.ann1.384K0G Arachis hypogaea HOM05D006108 ORTHO05D007605 1.9e-11 72.4 54 64.8
ClCG04G011190 Citrullus lanatus HOM05D006108 ORTHO05D007605 4.2e-11 71.2 44 70.5
Sed0027931 Sechium edule HOM05D006108 ORTHO05D007605 7.2e-11 70.5 46 71.7
Peaxi162Scf00015g00844 Petunia axillaris HOM05D006108 ORTHO05D007605 1.6e-10 69.3 57 61.4
ClCG08G005220 Citrullus lanatus HOM05D006108 ORTHO05D007605 1.4e-09 66.2 72 51.4
CAN.G438.131 Capsicum annuum HOM05D006108 ORTHO05D007605 6.8e-09 63.9 46 67.4
FAN04G0077 Fragaria x ananassa HOM05D006108 ORTHO05D007605 2.6e-08 62.0 55 61.8
PGSC0003DMG400010902 Solanum tuberosum HOM05D006108 ORTHO05D007605 4.4e-08 61.2 39 71.8
TWI15G1195 Tripterygium wilfordii HOM05D006108 ORTHO05D007605 9.8e-08 60.1 72 47.2
MELO3C011555.2 Cucumis melo HOM05D006108 ORTHO05D007605 1.8e-06 55.8 39 64.1


User provided reference genes

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