Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049682 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 7.4e-101 370.9 244 100.0
Actinidia13348 Actinidia chinensis HOM05D007634 ORTHO05D004310 5.7e-37 158.7 232 64.7
Actinidia14250 Actinidia chinensis HOM05D003564 ORTHO05D004310 9.8e-37 157.9 222 66.2
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 2.8e-31 139.8 240 48.8
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 1.4e-27 127.5 243 57.2
Lj3A834G63 Lonicera japonica HOM05D007634 ORTHO05D004310 1.6e-26 124.0 235 48.1
Hma1.2p1_0078F.1_g039860 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 1.1e-24 117.9 223 58.7
Dinv15141 Davidia involucrata HOM05D007634 ORTHO05D004310 1.6e-23 114.0 182 62.1
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 6.2e-23 112.1 242 53.7
Dinv44263 Davidia involucrata HOM05D007634 ORTHO05D004310 1.1e-22 111.3 183 60.1
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 1.8e-22 110.5 231 52.8
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 2.3e-22 110.2 246 52.4
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 3.1e-22 109.8 246 52.4
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 5.2e-22 109.0 243 51.4
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 1.7e-20 104.0 245 51.4
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 2.2e-20 103.6 243 50.6
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 2.9e-20 103.2 243 51.9
Rhsim02G0002500 Rhododendron simsii HOM05D032642 ORTHO05D004310 4.9e-20 102.4 184 63.0
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 1.1e-19 101.3 246 50.8
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 2.1e-18 97.1 239 49.8
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 3.5e-18 96.3 234 53.4
FAN12G0129 Fragaria x ananassa HOM05D007634 ORTHO05D004310 6.0e-18 95.5 242 47.1
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 7.8e-18 95.1 243 50.2
DCAR_026994 Daucus carota HOM05D007634 ORTHO05D004310 2.3e-17 93.6 239 39.7
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 3.0e-17 93.2 242 47.1
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 3.0e-17 93.2 242 47.1
vmacro15171 Vaccinium macrocarpon HOM05D018149 ORTHO05D020732 3.9e-17 92.8 236 33.9
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 5.1e-17 92.4 242 47.9
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 6.6e-17 92.0 241 48.5
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 8.6e-17 91.7 239 49.0
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 3.3e-16 89.7 238 46.6
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 4.7e-15 85.9 238 47.5
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 4.7e-15 85.9 240 46.7
CiPaw.01G136100 Carya illinoinensis HOM05D007634 ORTHO05D004310 1.4e-14 84.3 244 48.8
Ciclev10005745m.g Citrus clementina HOM05D007634 ORTHO05D004310 8.9e-14 81.6 240 50.4
MBI18_g35543_MAGBIO Magnolia biondii HOM05D007634 ORTHO05D004310 1.5e-13 80.9 232 47.4
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 1.5e-13 80.9 238 47.1
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 3.4e-13 79.7 183 55.7
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 4.4e-13 79.3 244 30.3
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 5.8e-13 79.0 237 40.5
Sabra08G0077600 Salix brachista HOM05D007634 ORTHO05D004310 7.5e-13 78.6 283 41.7
Duzib212G0210 Durio zibethinus HOM05D007634 ORTHO05D004310 2.9e-12 76.6 243 49.4
Atru.chr4.3053 Acer truncatum HOM05D007634 ORTHO05D004310 6.4e-12 75.5 191 54.5
Ciclev10021807m.g Citrus clementina HOM05D009814 ORTHO05D004310 6.4e-12 75.5 237 44.7
ATR0693G086 Amborella trichopoda HOM05D007634 ORTHO05D004310 8.3e-12 75.1 236 40.3
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 3.2e-11 73.2 84 51.2
Gohir.D01G023562 Gossypium hirsutum HOM05D007634 ORTHO05D004310 5.4e-11 72.4 181 59.7
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 1.6e-10 70.9 243 43.2
Gorai.002G031000 Gossypium raimondii HOM05D007634 ORTHO05D004310 1.6e-10 70.9 181 59.7
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 1.6e-10 70.9 238 28.2
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 2.1e-10 70.5 243 46.1
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 4.6e-10 69.3 220 45.0
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 1.3e-09 67.8 246 47.6
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 2.3e-09 67.0 222 45.5
Peaxi162Scf00228g00615 Petunia axillaris HOM05D012194 ORTHO05D015569 2.3e-09 67.0 242 40.1
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 5.1e-09 65.9 239 44.4
Eucgr.H04066 Eucalyptus grandis HOM05D007634 ORTHO05D004310 6.6e-09 65.5 237 46.8
Gohir.A01G035100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 8.6e-09 65.1 177 58.8
Sc13g0007130 Simmondsia chinensis HOM05D007634 ORTHO05D004310 8.6e-09 65.1 243 41.6
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 1.1e-08 64.7 256 45.3
Gohir.D08G141000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 1.1e-08 64.7 239 44.4
Manes.03G206900 Manihot esculenta HOM05D007634 ORTHO05D004310 1.1e-08 64.7 243 46.5
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 1.5e-08 64.3 246 43.1
Manes.15G001900 Manihot esculenta HOM05D007634 ORTHO05D004310 1.5e-08 64.3 243 46.1
DCAR_023359 Daucus carota HOM05D012194 ORTHO05D015569 2.5e-08 63.5 224 40.6
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 3.3e-08 63.2 238 32.4
Gohir.D09G241900 Gossypium hirsutum HOM05D007634 ORTHO05D004310 9.5e-08 61.6 242 44.6
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 9.5e-08 61.6 238 29.0
CDE02G3511 Ceratophyllum demersum HOM05D063264 ORTHO05D004310 1.6e-07 60.8 241 44.0
Ca_00964_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 1.6e-07 60.8 74 51.4
Lalb_Chr07g0181961 Lupinus albus HOM05D007634 ORTHO05D004310 1.6e-07 60.8 223 48.0
arahy.Tifrunner.gnm1.ann1.NL9DLR Arachis hypogaea HOM05D007634 ORTHO05D004310 2.8e-07 60.1 80 43.8
CANSAT78G1884 Cannabis sativa HOM05D007634 ORTHO05D004310 2.8e-07 60.1 245 45.7
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 2.8e-07 60.1 248 44.4
Haze_04036 Corylus avellana HOM05D013055 ORTHO05D014149 3.6e-07 59.7 183 49.7
PSO421G0073 Papaver somniferum HOM05D007634 ORTHO05D004310 3.6e-07 59.7 79 44.3
TWI73G1001 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 3.6e-07 59.7 239 45.6
Nitab4.5_0004165g0050 Nicotiana tabacum HOM05D012194 ORTHO05D015569 4.7e-07 59.3 251 45.8
PSO724G1196 Papaver somniferum HOM05D007634 ORTHO05D004310 4.7e-07 59.3 79 44.3
arahy.Tifrunner.gnm1.ann1.F6IICX Arachis hypogaea HOM05D007634 ORTHO05D004310 6.2e-07 58.9 80 43.8
Glyma.09G033800 Glycine max HOM05D007634 ORTHO05D004310 8.1e-07 58.5 248 43.5
Lalb_Chr18g0058621 Lupinus albus HOM05D007634 ORTHO05D004310 8.1e-07 58.5 245 44.5
Gohir.A09G241100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 1.1e-06 58.2 242 45.5
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 1.4e-06 57.8 220 43.6
Cfa006724 Carpinus fangiana HOM05D013055 ORTHO05D014149 1.8e-06 57.4 183 53.0
Nitab4.5_0000647g0240 Nicotiana tabacum HOM05D012194 ORTHO05D015569 1.8e-06 57.4 239 46.4
CSS0049163 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 4.0e-06 56.2 249 41.8
Gohir.A11G108100 Gossypium hirsutum HOM05D009814 ORTHO05D004310 4.0e-06 56.2 224 46.4
CiPaw.07G030700 Carya illinoinensis HOM05D013055 ORTHO05D014149 5.2e-06 55.8 183 49.2
Glyma.15G138500 Glycine max HOM05D007634 ORTHO05D004310 6.8e-06 55.5 236 46.2
Sopen01g023890 Solanum pennellii HOM05D000003 ORTHO05D015569 6.8e-06 55.5 234 36.3
arahy.Tifrunner.gnm1.ann1.E7T2Z7 Arachis hypogaea HOM05D007634 ORTHO05D004310 8.9e-06 55.1 244 43.0
arahy.Tifrunner.gnm1.ann1.X0JG6N Arachis hypogaea HOM05D007634 ORTHO05D004310 8.9e-06 55.1 244 43.0
CSS0041924 Camellia sinensis var. sinensis HOM05D015885 ORTHO05D012930 8.9e-06 55.1 215 39.1
Duzib211G0633 Durio zibethinus HOM05D009814 ORTHO05D004310 8.9e-06 55.1 218 38.5
Eucgr.K03556 Eucalyptus grandis HOM05D009154 ORTHO05D004310 8.9e-06 55.1 233 38.2
Lj6g0019253 Lotus japonicus HOM05D007634 ORTHO05D004310 8.9e-06 55.1 73 49.3
Psat1g162160 Pisum sativum HOM05D007634 ORTHO05D004310 8.9e-06 55.1 73 47.9


User provided reference genes

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