Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 3.3e-29 131.0 62 100.0
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 7.3e-29 129.8 62 98.4
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 9.8e-26 119.4 60 88.3
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 2.2e-25 118.2 60 88.3
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 2.2e-25 118.2 60 88.3
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 6.4e-25 116.7 59 89.8
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 8.3e-25 116.3 60 86.7
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 8.3e-25 116.3 60 85.0
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 1.1e-24 115.9 60 83.3
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 1.4e-24 115.5 60 85.0
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.8e-24 115.2 60 86.7
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 1.8e-24 115.2 60 83.3
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 2.4e-24 114.8 60 83.3
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 2.4e-24 114.8 60 83.3
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 5.4e-24 113.6 60 80.0
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 7.0e-24 113.2 59 86.4
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 7.0e-24 113.2 60 85.0
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 7.0e-24 113.2 60 85.0
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 7.0e-24 113.2 60 80.0
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 9.2e-24 112.8 60 83.3
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 9.2e-24 112.8 60 83.3
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 9.2e-24 112.8 59 83.1
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 9.2e-24 112.8 60 80.0
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 9.2e-24 112.8 60 80.0
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 9.2e-24 112.8 60 80.0
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 1.2e-23 112.5 59 86.4
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 1.6e-23 112.1 60 85.0
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 1.6e-23 112.1 60 80.0
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 4.6e-23 110.5 60 80.0
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 4.6e-23 110.5 59 84.7
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 5.9e-23 110.2 61 77.0
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 5.9e-23 110.2 60 76.7
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 5.9e-23 110.2 60 76.7
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 5.9e-23 110.2 60 78.3
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 5.9e-23 110.2 60 80.0
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 7.8e-23 109.8 59 83.1
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 7.8e-23 109.8 58 84.5
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 7.8e-23 109.8 61 75.4
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 7.8e-23 109.8 60 78.3
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 7.8e-23 109.8 60 80.0
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 7.8e-23 109.8 60 78.3
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 7.8e-23 109.8 58 84.5
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 1.0e-22 109.4 60 76.7
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.0e-22 109.4 60 76.7
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 1.0e-22 109.4 60 76.7
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 1.3e-22 109.0 60 81.7
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 1.7e-22 108.6 60 80.0
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 1.7e-22 108.6 60 78.3
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 1.7e-22 108.6 58 82.8
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 2.3e-22 108.2 59 78.0
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 2.3e-22 108.2 59 78.0
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 3.0e-22 107.8 58 82.8
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 3.0e-22 107.8 61 77.0
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.0e-22 107.8 60 80.0
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.0e-22 107.8 60 80.0
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 3.0e-22 107.8 59 78.0
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 3.9e-22 107.5 62 80.6
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 3.9e-22 107.5 59 78.0
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 3.9e-22 107.5 59 78.0
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 3.9e-22 107.5 59 78.0
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 3.9e-22 107.5 59 78.0
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 3.9e-22 107.5 59 78.0
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 5.0e-22 107.1 60 78.3
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 5.0e-22 107.1 60 73.3
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.6e-22 106.7 60 78.3
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 6.6e-22 106.7 60 76.7
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 8.6e-22 106.3 59 79.7
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 1.1e-21 105.9 60 76.7
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.1e-21 105.9 59 78.0
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 1.5e-21 105.5 59 76.3
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 1.9e-21 105.1 58 77.6
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 1.9e-21 105.1 60 73.3
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 2.5e-21 104.8 58 79.3
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 3.3e-21 104.4 59 76.3
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 4.3e-21 104.0 59 74.6
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 4.3e-21 104.0 57 78.9
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 4.3e-21 104.0 59 76.3
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 4.3e-21 104.0 59 76.3
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 5.6e-21 103.6 61 73.8
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 5.6e-21 103.6 60 73.3
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 7.3e-21 103.2 60 73.3
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 7.3e-21 103.2 61 78.7
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 7.3e-21 103.2 60 71.7
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 7.3e-21 103.2 59 76.3
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 7.3e-21 103.2 59 76.3
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 9.5e-21 102.8 60 73.3
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 1.2e-20 102.4 60 70.0
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 1.2e-20 102.4 60 70.0
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 1.2e-20 102.4 60 71.7
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 1.6e-20 102.1 62 75.8
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 2.1e-20 101.7 58 75.9
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.8e-20 101.3 60 75.0
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 2.8e-20 101.3 63 73.0
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 2.8e-20 101.3 60 73.3
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 3.6e-20 100.9 58 77.6
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 6.2e-20 100.1 59 74.6
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 8.0e-20 99.8 62 75.8
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 1.4e-19 99.0 57 75.4
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 1.8e-19 98.6 57 75.4
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 8.9e-19 96.3 60 71.7
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 8.9e-19 96.3 57 71.9
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 2.0e-18 95.1 62 72.6
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 3.4e-18 94.4 62 72.6
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 1.1e-16 89.4 61 59.0
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 9.2e-16 86.3 58 65.5
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 2.8e-12 74.7 59 49.2
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 2.8e-12 74.7 60 50.0
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 6.8e-11 70.1 60 45.0
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 7.5e-10 66.6 58 48.3
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 7.1e-08 60.1 31 77.4


User provided reference genes

Program Settings