Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-202 709.5 354 100.0
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.4e-195 683.7 354 96.3
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.5e-190 668.7 356 95.5
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.4e-185 652.1 340 95.9
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.7e-179 630.9 354 91.8
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 9.8e-171 603.6 354 83.3
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 9.8e-171 603.6 354 83.3
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-167 593.2 354 86.4
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 8.9e-148 527.3 357 70.3
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 7.5e-147 524.2 350 74.0
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 5.4e-145 518.1 348 75.3
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 7.1e-145 517.7 357 72.8
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 1.9e-142 509.6 357 72.0
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 1.9e-142 509.6 364 70.9
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 4.7e-141 505.0 360 69.7
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 4.0e-140 501.9 346 71.4
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 5.2e-140 501.5 362 69.3
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 9.9e-139 497.3 347 71.2
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 4.9e-138 495.0 356 69.9
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 4.1e-137 491.9 359 70.2
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 3.5e-136 488.8 358 71.2
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 6.0e-136 488.0 348 68.1
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 1.3e-135 486.9 354 70.1
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 1.7e-135 486.5 350 70.3
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 5.1e-135 485.0 363 66.4
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 1.5e-134 483.4 356 66.3
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 1.9e-134 483.0 344 69.8
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 4.3e-134 481.9 356 68.3
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 5.6e-134 481.5 348 70.7
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 7.3e-134 481.1 356 69.4
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 1.6e-133 479.9 362 66.0
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 1.6e-133 479.9 362 66.0
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 6.2e-133 478.0 385 64.9
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 8.1e-133 477.6 354 65.8
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 2.4e-132 476.1 344 69.8
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 3.1e-132 475.7 356 65.4
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 3.1e-132 475.7 356 67.4
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 6.9e-132 474.6 348 68.7
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 9.0e-132 474.2 348 68.4
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 1.2e-131 473.8 356 67.4
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 1.5e-131 473.4 355 68.2
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 2.0e-131 473.0 356 66.6
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 5.8e-131 471.5 345 68.7
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 7.6e-131 471.1 362 65.7
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 1.3e-130 470.3 348 68.4
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.7e-130 469.9 362 65.7
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 1.7e-130 469.9 362 65.7
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 2.9e-130 469.2 348 68.4
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 3.8e-130 468.8 345 68.7
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 4.9e-130 468.4 356 66.9
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 1.9e-129 466.5 336 69.3
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 9.3e-129 464.2 348 67.5
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 2.1e-128 463.0 350 67.7
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.7e-128 462.6 348 67.5
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 7.8e-128 461.1 356 66.0
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 3.9e-127 458.8 352 68.5
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 6.6e-127 458.0 373 63.5
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 1.9e-126 456.4 360 62.8
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 9.6e-126 454.1 353 64.0
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.3e-125 453.8 359 65.2
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 2.8e-125 452.6 372 61.0
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 4.0e-124 448.7 354 67.2
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 2.9e-122 442.6 352 65.1
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 1.4e-121 440.3 329 67.2
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 1.6e-120 436.8 346 62.7
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 2.1e-120 436.4 364 62.1
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 5.1e-119 431.8 354 61.0
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 9.6e-118 427.6 356 62.1
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 1.3e-117 427.2 355 62.5
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 3.7e-117 425.6 358 61.5
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 4.8e-117 425.2 356 61.0
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 4.8e-117 425.2 352 62.8
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 6.2e-117 424.9 358 61.2
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 2.4e-116 422.9 352 63.1
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 3.1e-116 422.5 360 61.7
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 5.3e-116 421.8 353 62.0
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 5.3e-116 421.8 367 59.1
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 6.9e-116 421.4 355 60.8
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 3.4e-115 419.1 367 59.7
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 3.4e-115 419.1 370 60.0
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 9.9e-115 417.5 359 60.2
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 1.7e-114 416.8 368 62.0
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 2.2e-114 416.4 358 60.6
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 1.6e-112 410.2 357 59.9
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 1.8e-111 406.8 350 58.9
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 7.4e-110 401.4 355 60.0
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 9.6e-110 401.0 335 64.2
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 6.2e-109 398.3 335 62.4
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 2.4e-108 396.4 335 62.4
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 6.9e-108 394.8 335 62.1
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 6.5e-106 388.3 334 62.0
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 8.4e-106 387.9 360 59.2
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 1.6e-104 383.6 338 59.2
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.6e-104 382.1 211 92.4
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.6e-101 373.6 211 91.5
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.4e-100 369.8 211 91.0
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 1.9e-97 360.1 227 76.7
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 3.2e-97 359.4 250 70.8
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 7.9e-96 354.8 235 74.5
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 2.6e-83 313.2 225 70.2
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 1.0e-82 311.2 352 49.7
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 1.9e-81 307.0 311 53.7
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 4.2e-81 305.8 345 49.9
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 5.3e-76 288.9 350 43.1
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 8.5e-74 281.6 163 79.1
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 8.8e-71 271.6 211 68.2
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 4.8e-69 265.8 371 40.4
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 3.5e-67 259.6 216 64.4
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 7.7e-67 258.5 216 59.7
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-65 254.6 214 66.4
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 8.3e-61 238.4 313 44.4
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.7e-59 233.4 120 95.8
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 1.7e-53 214.2 146 74.0
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 2.3e-47 193.7 241 47.3
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 3.7e-45 186.4 377 31.8
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 2.7e-43 180.3 145 58.6
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 5.6e-33 146.0 165 42.4
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.7e-27 127.1 66 97.0
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.3e-25 120.2 66 90.9
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.8e-21 106.7 66 84.8
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 9.3e-12 75.5 52 65.4
QL93p0107_0059 Quercus lobata HOM05D006038 ORTHO05D007547 1.2e-11 75.1 56 60.7
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 4.6e-11 73.2 158 30.4
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 4.6e-11 73.2 53 66.0
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 4.6e-11 73.2 53 66.0
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 4.6e-11 73.2 53 66.0
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 1.0e-10 72.0 70 54.3
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 1.3e-10 71.6 56 62.5
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 2.3e-10 70.9 117 41.0
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 9.0e-07 58.9 49 59.2
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 9.0e-07 58.9 49 59.2
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 9.0e-07 58.9 49 59.2
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 9.0e-07 58.9 49 59.2


User provided reference genes

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