Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049611 Camellia sinensis var. sinensis HOM05D006936 ORTHO05D008273 5.1e-102 374.4 187 100.0
Hma1.2p1_0738F.1_g211120 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 6.1e-71 271.2 189 74.1
Hma1.2p1_2518F.1_g323766 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 6.1e-71 271.2 189 74.1
Prupe.4G214700 Prunus persica HOM05D006936 ORTHO05D008273 4.1e-67 258.5 187 70.6
Haze_09683 Corylus avellana HOM05D006936 ORTHO05D008273 9.1e-67 257.3 189 70.4
Cpa.g.sc12.300 Carica papaya HOM05D006936 ORTHO05D008273 1.7e-65 253.1 187 70.1
Thecc.07G035400 Theobroma cacao HOM05D006936 ORTHO05D008273 2.2e-65 252.7 187 69.5
CiPaw.11G190300 Carya illinoinensis HOM05D006936 ORTHO05D008273 6.5e-65 251.1 188 71.3
Lj6g0001928 Lotus japonicus HOM05D006936 ORTHO05D008273 1.5e-64 250.0 187 69.5
MD11G1216700 Malus domestica HOM05D006936 ORTHO05D008273 7.2e-64 247.7 187 68.4
Cc05_g13850 Coffea canephora HOM05D006936 ORTHO05D008273 1.2e-63 246.9 189 68.8
GSVIVG01037658001 Vitis vinifera HOM05D006936 ORTHO05D008273 2.1e-63 246.1 187 68.4
Gohir.D01G067300 Gossypium hirsutum HOM05D006936 ORTHO05D008273 2.7e-63 245.7 187 68.4
RcHm_v2.0_Chr5g0040171 Rosa chinensis HOM05D006936 ORTHO05D008273 2.7e-63 245.7 187 66.8
Duzib213G0701 Durio zibethinus HOM05D006936 ORTHO05D008273 3.6e-63 245.4 187 70.6
Gorai.002G089200 Gossypium raimondii HOM05D006936 ORTHO05D008273 4.7e-63 245.0 187 68.4
Ca_19852_v3 Cicer arietinum L. HOM05D006936 ORTHO05D008273 1.0e-62 243.8 187 67.9
DCAR_022566 Daucus carota HOM05D006936 ORTHO05D008273 1.0e-62 243.8 188 66.5
Eucgr.F03471 Eucalyptus grandis HOM05D006936 ORTHO05D008273 1.0e-62 243.8 187 67.4
FvH4_3g22870 Fragaria vesca HOM05D006936 ORTHO05D008273 1.4e-62 243.4 187 66.8
FAN11G3489 Fragaria x ananassa HOM05D006936 ORTHO05D008273 1.4e-62 243.4 187 66.8
Glyma.18G095900 Glycine max HOM05D006936 ORTHO05D008273 1.4e-62 243.4 186 68.3
Rhsim06G0217500 Rhododendron simsii HOM05D000228 ORTHO05D001122 2.3e-62 242.7 169 74.6
FAN21G0204 Fragaria x ananassa HOM05D006936 ORTHO05D008273 3.0e-62 242.3 187 66.3
TWI38G2356 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 3.0e-62 242.3 187 67.4
Migut.H01824 Erythranthe guttata HOM05D006936 ORTHO05D008273 4.0e-62 241.9 190 65.8
TAR624G1327 Trochodendron aralioides HOM05D006936 ORTHO05D008273 4.0e-62 241.9 191 67.5
Medtr3g052260 Medicago truncatula HOM05D006936 ORTHO05D008273 5.2e-62 241.5 187 65.8
Ciclev10009642m.g Citrus clementina HOM05D006936 ORTHO05D008273 6.7e-62 241.1 188 68.1
Potri.003G122100 Populus trichocarpa HOM05D006936 ORTHO05D008273 6.7e-62 241.1 187 66.8
Phvul.006G044500 Phaseolus vulgaris HOM05D006936 ORTHO05D008273 1.5e-61 240.0 187 69.0
QL08p009960 Quercus lobata HOM05D006936 ORTHO05D008273 2.0e-61 239.6 233 57.5
ClCG10G005400 Citrullus lanatus HOM05D006936 ORTHO05D008273 5.7e-61 238.0 187 67.9
TWI39G1260 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 5.7e-61 238.0 187 66.3
Glyma.08G317000 Glycine max HOM05D006936 ORTHO05D008273 9.7e-61 237.3 187 67.9
Gohir.A01G080100 Gossypium hirsutum HOM05D006936 ORTHO05D008273 1.3e-60 236.9 187 67.4
VMungo0540G1312 Vigna mungo HOM05D006936 ORTHO05D008273 1.7e-60 236.5 187 67.4
Lalb_Chr20g0113821 Lupinus albus HOM05D006936 ORTHO05D008273 2.2e-60 236.1 190 64.7
MSTRG.12976 Avicennia marina HOM05D006936 ORTHO05D008273 8.2e-60 234.2 194 65.5
TPR.G33779 Trifolium pratense HOM05D006936 ORTHO05D008273 1.1e-59 233.8 187 64.7
Manes.03G129900 Manihot esculenta HOM05D006936 ORTHO05D008273 1.4e-59 233.4 187 66.3
Psat5g178440 Pisum sativum HOM05D006936 ORTHO05D008273 2.4e-59 232.6 186 65.1
HanXRQChr03g0076461 Helianthus annuus HOM05D006936 ORTHO05D008273 3.1e-59 232.3 190 63.7
CsaV3_3G005130 Cucumis sativus L. HOM05D006936 ORTHO05D008273 4.1e-59 231.9 187 65.8
PGSC0003DMG401022215 Solanum tuberosum HOM05D006936 ORTHO05D008273 7.0e-59 231.1 187 64.7
BcaC07g38260 Brassica carinata HOM05D006936 ORTHO05D008273 9.1e-59 230.7 187 60.4
BcaNung03571 Brassica carinata HOM05D006936 ORTHO05D008273 9.1e-59 230.7 187 60.4
Sopen07g032840 Solanum pennellii HOM05D006936 ORTHO05D008273 1.6e-58 229.9 187 64.2
Aqoxy3G01790 Aquilegia oxysepala HOM05D006936 ORTHO05D008273 2.6e-58 229.2 198 62.6
Carub.0007s1390 Capsella rubella HOM05D006936 ORTHO05D008273 2.6e-58 229.2 187 61.0
Solyc07g064640.3 Solanum lycopersicum HOM05D006936 ORTHO05D008273 3.5e-58 228.8 187 63.6
AL7G25870 Arabidopsis lyrata HOM05D006936 ORTHO05D008273 5.9e-58 228.0 187 60.4
SGA_v2.0_scaffold8G04322 Striga asiatica HOM05D006936 ORTHO05D008273 1.7e-57 226.5 189 65.1
Sp7g24910 Schrenkiella parvula HOM05D006936 ORTHO05D008273 2.9e-57 225.7 187 59.4
Potri.001G109600 Populus trichocarpa HOM05D006936 ORTHO05D008273 5.0e-57 224.9 187 65.2
AT4G26965 Arabidopsis thaliana HOM05D006936 ORTHO05D008273 8.5e-57 224.2 187 59.9
C08p10070 Brassica napus HOM05D006936 ORTHO05D008273 1.5e-56 223.4 187 59.9
BolC8t48685H Brassica oleracea HOM05D006936 ORTHO05D008273 1.5e-56 223.4 187 59.9
ECA240G2843 Erigeron canadensis HOM05D006936 ORTHO05D008273 3.2e-56 222.2 175 67.4
THA.LOC104813424 Tarenaya hassleriana HOM05D006936 ORTHO05D008273 3.2e-56 222.2 189 59.3
C01p23100 Brassica napus HOM05D006936 ORTHO05D008273 1.2e-55 220.3 190 58.4
A01p18140 Brassica napus HOM05D006936 ORTHO05D008273 6.1e-55 218.0 190 57.4
PSO832G3825 Papaver somniferum HOM05D006936 ORTHO05D008273 8.0e-55 217.6 188 62.2
PSO210G5704 Papaver somniferum HOM05D006936 ORTHO05D008273 1.4e-54 216.9 187 59.9
unitig_8.g4785 Utricularia gibba HOM05D006936 ORTHO05D008273 1.8e-54 216.5 188 59.0
Lsat_1_v5_gn_9_93840 Lactuca sativa HOM05D006936 ORTHO05D008273 2.3e-54 216.1 192 59.4
BcaB03g12517 Brassica carinata HOM05D006936 ORTHO05D008273 3.0e-54 215.7 189 60.8
BraA01t01769Z Brassica rapa HOM05D006936 ORTHO05D008273 3.0e-54 215.7 198 55.6
EL10Ac4g07798 Beta vulgaris HOM05D006936 ORTHO05D008273 6.8e-54 214.5 190 61.1
BolC1t02244H Brassica oleracea HOM05D006936 ORTHO05D008273 6.8e-54 214.5 201 54.7
PGR031G2182 Punica granatum HOM05D006936 ORTHO05D008273 6.8e-54 214.5 188 63.3
HPP92_004131 Vanilla planifolia HOM05D006936 ORTHO05D008273 6.8e-54 214.5 191 61.3
FAN16G3045 Fragaria x ananassa HOM05D006936 ORTHO05D008273 1.5e-53 213.4 209 56.9
arahy.Tifrunner.gnm1.ann1.MX8M57 Arachis hypogaea HOM05D006936 ORTHO05D008273 2.0e-53 213.0 155 69.7
Nn1g03514 Nelumbo nucifera HOM05D006936 ORTHO05D008273 7.5e-53 211.1 191 62.3
Peaxi162Scf00235g00220 Petunia axillaris HOM05D006936 ORTHO05D008273 1.3e-52 210.3 216 56.5
arahy.Tifrunner.gnm1.ann1.HAV09U Arachis hypogaea HOM05D006936 ORTHO05D008273 2.8e-52 209.1 154 68.8
Cfa020336 Carpinus fangiana HOM05D000228 ORTHO05D001122 4.8e-52 208.4 135 74.8
Sc16g0005990 Simmondsia chinensis HOM05D006936 ORTHO05D008273 8.3e-52 207.6 194 59.8
BraA08t34018Z Brassica rapa HOM05D006936 ORTHO05D008273 1.4e-51 206.8 225 50.2
Nitab4.5_0003495g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 4.5e-50 201.8 135 73.3
Nitab4.5_0007360g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 1.7e-49 199.9 135 71.9
Hma1.2p1_0738F.1_g211130 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.9e-49 199.1 149 71.8
Oeu048401.1 Olea europaea HOM05D006936 ORTHO05D008273 2.9e-49 199.1 134 72.4
CAN.G337.138 Capsicum annuum HOM05D006936 ORTHO05D008273 3.2e-48 195.7 187 57.8
Sabra01G0082900 Salix brachista HOM05D006936 ORTHO05D008273 3.2e-48 195.7 151 67.5
Sed0005355 Sechium edule HOM05D006936 ORTHO05D008273 4.2e-48 195.3 134 71.6
A08p20640 Brassica napus HOM05D006936 ORTHO05D008273 4.7e-47 191.8 171 58.5
Os09g0500200 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 1.0e-46 190.7 191 57.6
Thhalv10026517m.g Eutrema salsugineum HOM05D006936 ORTHO05D008273 5.2e-46 188.3 135 66.7
Dinv40761 Davidia involucrata HOM05D006936 ORTHO05D008273 2.0e-45 186.4 136 75.7
CDE05G0574 Ceratophyllum demersum HOM05D006936 ORTHO05D008273 9.8e-45 184.1 136 69.1
CANSAT11G0469 Cannabis sativa HOM05D006936 ORTHO05D008273 1.3e-44 183.7 190 56.3
ATR1094G005 Amborella trichopoda HOM05D006936 ORTHO05D008273 4.9e-44 181.8 157 63.1
CARHR234570 Cardamine hirsuta HOM05D006936 ORTHO05D008273 5.4e-43 178.3 152 59.9
Zm00001eb102230 Zea mays HOM05D006936 ORTHO05D008273 2.3e-41 172.9 187 50.8
vmacro02233 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 2.1e-39 166.4 91 84.6
MBI02_g21871_MAGBIO Magnolia biondii HOM05D006936 ORTHO05D008273 6.1e-39 164.9 222 43.7
MELO3C025377.2 Cucumis melo HOM05D006936 ORTHO05D008273 8.0e-39 164.5 208 49.0
Aa31LG5G12010 Aethionema arabicum HOM05D006936 ORTHO05D008273 1.4e-38 163.7 188 51.6
Actinidia24797 Actinidia chinensis HOM05D006936 ORTHO05D008273 7.5e-37 157.9 127 66.9
Atru.chr2.3444 Acer truncatum HOM05D006936 ORTHO05D008273 3.7e-36 155.6 101 74.3
Sabra18G0079500 Salix brachista HOM05D006936 ORTHO05D008273 1.0e-33 147.5 120 61.7
Hma1.2p1_0738F.1_g211140 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 4.3e-32 142.1 123 66.7
Hma1.2p1_2518F.1_g323762 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 4.3e-32 142.1 123 66.7
Hund23239 Selenicereus undatus HOM05D006936 ORTHO05D008273 4.7e-31 138.7 170 49.4
Hma1.2p1_0738F.1_g211110 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 6.8e-30 134.8 74 79.7
AUR62020430 Chenopodium quinoa HOM05D006936 ORTHO05D008273 7.5e-29 131.3 226 40.3
Os05g0538900 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 2.3e-25 119.8 91 67.0
arahy.Tifrunner.gnm1.ann1.XX62UZ Arachis hypogaea HOM05D006936 ORTHO05D008273 8.9e-22 107.8 115 60.0
Mapoly0093s0007 Marchantia polymorpha HOM05D006936 ORTHO05D008273 2.0e-21 106.7 198 33.8
Pp3c15_25830 Physcomitrium patens HOM05D006936 ORTHO05D008273 9.8e-21 104.4 140 44.3
Ah.06g185850 Amaranthus hybridus HOM05D006936 ORTHO05D008273 2.8e-15 86.3 115 47.8
vmacro02234 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 1.5e-13 80.5 79 60.8
DCAR_000990 Daucus carota HOM05D006936 ORTHO05D008273 2.3e-09 66.6 66 63.6
SEGI_32271 Sequoiadendron giganteum HOM05D006301 ORTHO05D008273 1.1e-08 64.3 49 65.3
AUR62015785 Chenopodium quinoa HOM05D000355 ORTHO05D000227 9.6e-08 61.2 115 37.4


User provided reference genes

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