Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049610 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.3e-54 216.1 104 100.0
CSS0040440 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.5e-47 192.6 104 89.4
CSS0029699 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 4.4e-47 191.0 104 89.4
CSS0002638 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 6.7e-27 124.0 104 63.5
CSS0025139 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.1e-26 123.2 104 63.5
CSS0036848 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 7.2e-21 104.0 96 51.0
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 8.7e-19 97.1 98 49.0
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.1e-18 96.7 98 49.0
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-17 92.4 99 44.4
CSS0014976 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.3e-17 90.9 98 45.9
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-15 85.9 89 47.2
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 8.5e-14 80.5 98 41.8
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.9e-13 79.3 97 38.1
CSS0019282 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.2e-13 78.6 83 43.4
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.2e-13 78.6 96 39.6
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.2e-13 78.2 98 41.8
Lj3P354T13 Lonicera japonica HOM05D008183 ORTHO05D007254 2.7e-12 75.5 92 40.2
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.6e-12 75.1 96 37.5
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 4.6e-12 74.7 96 37.5
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.1e-12 74.3 96 42.7
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 6.1e-12 74.3 99 35.4
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 7.9e-12 73.9 96 36.5
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.8e-11 72.8 97 36.1
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.3e-11 72.4 102 35.3
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 8.8e-11 70.5 94 40.4
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 8.8e-11 70.5 96 35.4
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.0e-10 69.3 83 42.2
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.0e-10 69.3 83 42.2
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.3e-10 68.6 97 40.2
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.3e-10 68.6 82 41.5
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 2.8e-09 65.5 96 34.4
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 8.2e-09 63.9 93 35.5
CSS0022949 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.1e-08 63.5 97 37.1
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.1e-08 63.5 96 34.4
CSS0033631 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 5.3e-08 61.2 101 36.6
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.3e-08 61.2 97 33.0
CSS0000654 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.5e-07 59.7 76 39.5
vmacro06821 Vaccinium macrocarpon HOM05D001548 ORTHO05D003901 2.0e-07 59.3 97 34.0
Rhsim03G0007500 Rhododendron simsii HOM05D033359 ORTHO05D340347 4.5e-07 58.2 87 35.6
CSS0048373 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.7e-07 57.4 111 34.2
CSS0023048 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.0e-06 57.0 98 35.7
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-06 56.6 71 33.8
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 8.5e-06 53.9 76 35.5


User provided reference genes

Program Settings