Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 6.2e-172 607.4 322 100.0
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 1.2e-130 470.3 318 79.2
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 1.9e-120 436.4 303 78.5
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 1.6e-119 433.3 306 76.1
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 1.4e-115 420.2 307 73.3
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 4.5e-114 415.2 304 73.4
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 7.7e-114 414.5 307 72.3
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 1.0e-113 414.1 307 72.6
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 1.7e-113 413.3 306 72.9
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 8.5e-113 411.0 306 72.9
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 2.7e-111 406.0 307 70.7
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 1.8e-110 403.3 303 71.6
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 3.0e-110 402.5 307 70.0
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.1e-109 400.6 307 69.4
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 2.5e-109 399.4 285 75.4
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 3.3e-109 399.1 307 69.7
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 2.8e-108 396.0 299 73.2
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 1.8e-107 393.3 305 70.5
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 1.2e-106 390.6 306 68.6
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 2.6e-106 389.4 304 71.4
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 4.5e-106 388.7 296 71.6
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 1.0e-105 387.5 304 71.1
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 1.9e-104 383.3 306 68.6
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 4.2e-104 382.1 305 70.2
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 7.9e-103 377.9 301 69.1
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 6.7e-102 374.8 306 68.3
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 2.6e-101 372.9 299 66.6
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 2.2e-100 369.8 320 64.1
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 2.8e-100 369.4 295 68.8
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 7.0e-99 364.8 310 63.9
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 4.5e-98 362.1 274 72.6
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 7.7e-98 361.3 308 63.3
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 1.0e-97 360.9 307 66.8
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 2.9e-97 359.4 282 70.6
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 5.0e-97 358.6 300 64.7
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 8.5e-97 357.8 216 85.6
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 1.2e-95 354.0 306 65.0
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 1.5e-93 347.1 272 71.7
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 1.4e-91 340.5 291 66.3
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 2.9e-89 332.8 291 64.3
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 5.0e-89 332.0 295 63.4
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 1.1e-88 330.9 298 64.4
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 4.7e-87 325.5 293 62.5
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 8.0e-87 324.7 294 64.3
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 1.4e-86 323.9 294 64.3
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 2.6e-85 319.7 303 59.4
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 2.8e-84 316.2 301 61.8
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 3.7e-84 315.8 295 61.7
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 3.1e-83 312.8 288 60.4
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 2.7e-82 309.7 292 63.4
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 1.2e-79 300.8 288 60.4
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 4.5e-74 282.3 308 52.6
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 2.9e-68 263.1 237 63.7
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 1.7e-65 253.8 247 58.3
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 3.5e-58 229.6 218 61.9
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 1.7e-57 227.3 212 63.2
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 2.5e-56 223.4 183 65.0
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 4.3e-40 169.5 271 40.6
Solyc08g069220.2 Solanum lycopersicum HOM05D008288 ORTHO05D010469 5.4e-27 125.9 270 37.4
Sopen08g022840 Solanum pennellii HOM05D008288 ORTHO05D010469 5.3e-22 109.4 83 68.7
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 2.9e-20 103.6 287 31.4
ClCG11G006020 Citrullus lanatus HOM05D000215 ORTHO05D008904 7.4e-16 89.0 270 28.5
MELO3C008310.2 Cucumis melo HOM05D000215 ORTHO05D008904 1.6e-15 87.8 270 28.1
BcaC07g39773 Brassica carinata HOM05D000215 ORTHO05D001676 1.4e-11 74.7 293 25.6
vmacro10024 Vaccinium macrocarpon HOM05D000215 ORTHO05D008904 1.9e-11 74.3 271 28.0
Lalb_Chr10g0105221 Lupinus albus HOM05D000215 ORTHO05D008904 4.6e-10 69.7 270 25.2
Pp3c26_8290 Physcomitrium patens HOM05D006338 ORTHO05D007946 1.8e-09 67.8 284 27.5
Thecc.06G205300 Theobroma cacao HOM05D000215 ORTHO05D007108 5.1e-09 66.2 225 29.3
Psat7g107360 Pisum sativum HOM05D000215 ORTHO05D007108 1.5e-08 64.7 274 27.7
TPR.G13914 Trifolium pratense HOM05D000215 ORTHO05D007108 2.5e-08 63.9 219 31.1
COL.COLO4_31663 Corchorus olitorius HOM05D000215 ORTHO05D007108 5.7e-08 62.8 225 29.3
Lalb_Chr20g0122541 Lupinus albus HOM05D000215 ORTHO05D007108 9.6e-08 62.0 254 29.9
Duzib192G0603 Durio zibethinus HOM05D000215 ORTHO05D007108 1.3e-07 61.6 218 30.7
Gohir.A10G018000 Gossypium hirsutum HOM05D000215 ORTHO05D007108 1.6e-07 61.2 225 29.3
Gorai.011G020300 Gossypium raimondii HOM05D000215 ORTHO05D007108 1.6e-07 61.2 225 29.3
Ah.09g236910 Amaranthus hybridus HOM05D000215 ORTHO05D007108 2.1e-07 60.8 211 29.4
ATR0745G013 Amborella trichopoda HOM05D006338 ORTHO05D007946 2.1e-07 60.8 284 27.1
CiPaw.05G150000 Carya illinoinensis HOM05D000215 ORTHO05D003454 2.1e-07 60.8 265 24.5
Duzib235G1018 Durio zibethinus HOM05D000215 ORTHO05D007108 2.1e-07 60.8 202 29.2
Haze_06635 Corylus avellana HOM05D000215 ORTHO05D007108 2.8e-07 60.5 205 30.7
Gohir.D10G018300 Gossypium hirsutum HOM05D000215 ORTHO05D007108 2.8e-07 60.5 225 29.3
GSVIVG01006112001 Vitis vinifera HOM05D000215 ORTHO05D007108 3.7e-07 60.1 232 27.2
Haze_06646 Corylus avellana HOM05D000215 ORTHO05D007108 4.8e-07 59.7 205 30.7
Glyma.07G188400 Glycine max HOM05D000215 ORTHO05D007108 4.8e-07 59.7 213 27.2
Cfa000298 Carpinus fangiana HOM05D000215 ORTHO05D007108 6.3e-07 59.3 205 30.7
Duzib160G0747 Durio zibethinus HOM05D000215 ORTHO05D007108 6.3e-07 59.3 210 30.5
TWI63G1343 Tripterygium wilfordii HOM05D000215 ORTHO05D007108 6.3e-07 59.3 243 28.4
Sp7g19440 Schrenkiella parvula HOM05D000215 ORTHO05D007108 8.2e-07 58.9 249 29.7
CiPaw.10G113900 Carya illinoinensis HOM05D000215 ORTHO05D007108 1.1e-06 58.5 221 29.9
MD07G1049200 Malus domestica HOM05D006338 ORTHO05D007946 1.1e-06 58.5 291 26.8
THA.LOC104806263 Tarenaya hassleriana HOM05D000215 ORTHO05D007108 1.1e-06 58.5 273 26.7
Dinv17864 Davidia involucrata HOM05D000215 ORTHO05D007108 1.4e-06 58.2 217 29.5
Glyma.15G064800 Glycine max HOM05D000215 ORTHO05D007108 1.4e-06 58.2 251 26.7
CDE10G1179 Ceratophyllum demersum HOM05D000215 ORTHO05D002239 1.8e-06 57.8 264 25.4
FvH4_1g29130 Fragaria vesca HOM05D001865 ORTHO05D001815 1.8e-06 57.8 286 22.0
FAN19G0114 Fragaria x ananassa HOM05D001865 ORTHO05D001815 1.8e-06 57.8 286 22.0
Gohir.A06G208700 Gossypium hirsutum HOM05D000215 ORTHO05D007108 1.8e-06 57.8 225 27.1
Gohir.D06G212400 Gossypium hirsutum HOM05D000215 ORTHO05D007108 1.8e-06 57.8 225 27.1
Prupe.4G031100 Prunus persica HOM05D000215 ORTHO05D007108 2.4e-06 57.4 217 29.0
Manes.16G015200 Manihot esculenta HOM05D000215 ORTHO05D007108 4.1e-06 56.6 270 26.3
Medtr4g091880 Medicago truncatula HOM05D000215 ORTHO05D007108 4.1e-06 56.6 218 28.9
Ca_18466_v3 Cicer arietinum L. HOM05D000215 ORTHO05D007108 5.3e-06 56.2 224 28.6
Ca_29638_v3 Cicer arietinum L. HOM05D000215 ORTHO05D007108 5.3e-06 56.2 224 28.6
SHI02135 Sapria himalayana HOM05D000215 ORTHO05D007108 5.3e-06 56.2 201 28.9
CDE10G0830 Ceratophyllum demersum HOM05D000215 ORTHO05D002239 9.0e-06 55.5 195 25.6
Solyc06g051090.3 Solanum lycopersicum HOM05D000215 ORTHO05D008904 9.0e-06 55.5 270 26.3


User provided reference genes

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