Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 0.0e+00 1269.6 685 100.0
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 4.3e-308 1060.8 615 83.6
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 6.7e-293 1010.4 597 79.6
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 4.4e-292 1007.7 598 80.1
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 1.7e-291 1005.7 598 80.1
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 2.6e-289 998.4 593 79.8
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 1.0e-288 996.5 593 81.1
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 2.9e-288 995.0 591 81.0
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 3.0e-285 984.9 580 81.6
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 8.8e-285 983.4 636 74.2
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 2.6e-284 981.9 591 76.8
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 2.8e-283 978.4 601 79.4
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 3.7e-283 978.0 581 77.6
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 1.8e-282 975.7 602 78.9
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 4.1e-282 974.5 601 79.5
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 4.1e-282 974.5 601 79.4
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 4.1e-282 974.5 536 81.3
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 7.0e-282 973.8 601 79.2
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.6e-281 972.6 601 79.2
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 2.6e-281 971.8 583 80.4
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 4.5e-281 971.1 580 79.5
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 7.7e-281 970.3 590 79.5
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 1.7e-280 969.1 603 76.8
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 6.5e-280 967.2 577 80.8
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 7.2e-279 963.8 550 79.5
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 1.2e-278 963.0 601 77.2
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 3.6e-278 961.4 583 78.9
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 3.6e-278 961.4 583 78.9
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.0e-277 959.9 583 79.1
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 1.4e-277 959.5 592 74.7
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 6.7e-277 957.2 584 76.0
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 1.3e-275 953.0 601 74.0
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 2.0e-273 945.7 592 75.3
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 7.7e-273 943.7 583 78.0
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 1.7e-272 942.6 588 76.9
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 1.7e-272 942.6 601 73.5
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 8.0e-270 933.7 583 76.2
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 2.3e-269 932.2 599 75.6
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 3.0e-269 931.8 579 77.5
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 6.8e-269 930.6 583 76.5
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 2.3e-264 915.6 586 75.1
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 3.8e-264 914.8 593 74.7
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 1.9e-263 912.5 593 73.9
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 5.5e-263 911.0 577 75.6
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 5.5e-263 911.0 577 75.6
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 1.4e-261 906.4 593 73.4
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 3.0e-261 905.2 593 73.9
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 6.8e-261 904.0 608 71.7
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 2.0e-260 902.5 568 73.6
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 5.7e-260 901.0 607 71.5
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 7.5e-260 900.6 575 74.6
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 7.5e-260 900.6 575 74.6
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 3.7e-259 898.3 533 76.5
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 1.0e-256 890.2 577 73.8
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 2.9e-256 888.6 542 76.4
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 5.0e-256 887.9 523 77.1
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 6.6e-256 887.5 592 72.3
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 4.7e-254 881.3 522 75.7
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 4.7e-254 881.3 588 73.6
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 6.1e-254 880.9 533 75.8
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 1.4e-253 879.8 523 76.5
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 5.2e-253 877.9 567 72.5
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 8.9e-253 877.1 537 74.7
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 1.2e-252 876.7 584 73.3
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 9.8e-252 873.6 588 69.2
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 3.7e-251 871.7 531 75.5
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 4.9e-251 871.3 564 71.1
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 2.0e-249 865.9 600 70.7
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 9.5e-247 857.1 539 73.3
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 1.4e-245 853.2 574 73.0
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 5.8e-244 847.8 571 73.0
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 1.3e-240 836.6 580 70.7
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 1.2e-238 830.1 588 70.6
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 1.6e-238 829.7 583 68.8
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 8.1e-238 827.4 524 71.4
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 3.7e-235 818.5 583 68.6
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 7.1e-234 814.3 663 64.3
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 7.1e-234 814.3 569 69.9
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 3.9e-232 808.5 542 68.5
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 2.5e-231 805.8 525 70.7
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 2.1e-230 802.7 597 67.3
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 1.4e-229 800.0 596 67.1
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 9.2e-226 787.3 583 63.3
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 5.1e-216 755.0 584 63.5
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 1.3e-214 750.4 593 63.2
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 1.0e-200 704.1 590 61.4
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 3.0e-200 702.6 401 84.5
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 3.0e-184 649.4 393 74.3
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 5.3e-165 585.5 609 52.7
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 8.5e-163 578.2 343 75.8
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 4.0e-160 569.3 378 72.0
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 4.4e-159 565.8 376 76.3
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 1.8e-157 560.5 467 57.8
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 2.7e-156 556.6 575 49.0
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 2.1e-145 520.4 485 53.4
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 4.1e-141 506.1 274 81.0
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 1.7e-134 484.2 297 72.7
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 5.4e-133 479.2 264 80.3
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.4e-112 410.6 407 52.3
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 4.0e-112 409.8 346 56.4
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 5.6e-98 362.8 188 86.2
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 5.3e-96 356.3 196 84.2
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 1.3e-94 351.7 308 65.6
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 4.8e-89 333.2 354 50.0
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 2.0e-87 327.8 232 74.1
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 6.5e-70 269.6 169 71.0
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 4.7e-52 210.3 173 69.4
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 4.0e-35 154.1 117 65.0
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 8.3e-33 146.4 83 78.3
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-30 138.7 350 29.7
HPP92_011562 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.0e-19 102.8 117 42.7
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 2.0e-18 98.6 77 59.7
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 3.7e-17 94.4 72 52.8
Actinidia27040 Actinidia chinensis HOM05D007000 ORTHO05D030830 2.3e-06 58.5 73 41.1


User provided reference genes

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