Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049558 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 3.2e-47 191.4 98 100.0
CSS0042824 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 1.6e-43 179.1 98 95.9
CSS0019947 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 9.4e-31 136.7 88 84.1
CSS0045029 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 9.4e-31 136.7 88 84.1
CSS0043067 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 3.7e-27 124.8 72 88.9
Dinv36303 Davidia involucrata HOM05D006024 ORTHO05D007505 5.3e-26 120.9 88 75.0
Rhsim13G0225300 Rhododendron simsii HOM05D006024 ORTHO05D007505 3.5e-25 118.2 87 71.3
TAR636G1381 Trochodendron aralioides HOM05D006024 ORTHO05D007505 1.3e-24 116.3 105 63.8
Thhalv10021019m.g Eutrema salsugineum HOM05D006024 ORTHO05D007505 5.0e-24 114.4 90 71.1
Sp3g18810 Schrenkiella parvula HOM05D006024 ORTHO05D007505 8.5e-24 113.6 85 71.8
vmacro04169 Vaccinium macrocarpon HOM05D006024 ORTHO05D007505 1.1e-23 113.2 85 71.8
PGR119G1295 Punica granatum HOM05D006024 ORTHO05D007505 1.5e-23 112.8 86 70.9
Aa31LG8G7600 Aethionema arabicum HOM05D006024 ORTHO05D007505 3.2e-23 111.7 85 70.6
TWI60G1552 Tripterygium wilfordii HOM05D006024 ORTHO05D007505 3.2e-23 111.7 88 69.3
CARHR096620 Cardamine hirsuta HOM05D006024 ORTHO05D007505 4.2e-23 111.3 88 70.5
Cpa.g.sc84.110 Carica papaya HOM05D006024 ORTHO05D007505 4.2e-23 111.3 86 68.6
Manes.14G014400 Manihot esculenta HOM05D006024 ORTHO05D007505 9.4e-23 110.2 89 68.5
BcaC05g28281 Brassica carinata HOM05D006024 ORTHO05D007505 1.2e-22 109.8 85 69.4
C05p43290 Brassica napus HOM05D006024 ORTHO05D007505 1.2e-22 109.8 85 69.4
BolC5t33061H Brassica oleracea HOM05D006024 ORTHO05D007505 1.2e-22 109.8 85 69.4
Aqoxy1G00184 Aquilegia oxysepala HOM05D006024 ORTHO05D007505 1.6e-22 109.4 88 64.8
AL3G34710 Arabidopsis lyrata HOM05D006024 ORTHO05D007505 1.6e-22 109.4 88 69.3
Sed0023125 Sechium edule HOM05D006024 ORTHO05D007505 2.1e-22 109.0 88 64.8
CANSAT54G0336 Cannabis sativa HOM05D006024 ORTHO05D007505 2.7e-22 108.6 83 71.1
A05p27990 Brassica napus HOM05D006024 ORTHO05D007505 3.6e-22 108.2 85 68.2
BraA05t21682Z Brassica rapa HOM05D006024 ORTHO05D007505 3.6e-22 108.2 85 68.2
Eucgr.J00813 Eucalyptus grandis HOM05D006024 ORTHO05D007505 3.6e-22 108.2 88 67.0
Lj1A365G18 Lonicera japonica HOM05D006024 ORTHO05D007505 3.6e-22 108.2 105 57.1
CsaV3_4G023790 Cucumis sativus L. HOM05D006024 ORTHO05D007505 4.7e-22 107.8 88 63.6
Hma1.2p1_2304F.1_g319350 Hydrangea macrophylla HOM05D006024 ORTHO05D007505 4.7e-22 107.8 83 67.5
Lju1319A3G40 Lonicera japonica HOM05D006024 ORTHO05D007505 4.7e-22 107.8 91 62.6
MSTRG.12483 Avicennia marina HOM05D006024 ORTHO05D007505 6.1e-22 107.5 82 72.0
MELO3C014640.2 Cucumis melo HOM05D006024 ORTHO05D007505 6.1e-22 107.5 88 63.6
Carub.0003s2075 Capsella rubella HOM05D006024 ORTHO05D007505 8.0e-22 107.1 88 67.0
CiPaw.13G165500 Carya illinoinensis HOM05D006024 ORTHO05D007505 8.0e-22 107.1 84 69.0
AT3G20790 Arabidopsis thaliana HOM05D006024 ORTHO05D007505 1.0e-21 106.7 89 67.4
Oeu042179.3 Olea europaea HOM05D006024 ORTHO05D007505 1.0e-21 106.7 88 63.6
Cfa009695 Carpinus fangiana HOM05D006024 ORTHO05D007505 1.4e-21 106.3 83 69.9
Cc01_g04140 Coffea canephora HOM05D006024 ORTHO05D007505 1.4e-21 106.3 88 64.8
MBI04_g27131_MAGBIO Magnolia biondii HOM05D006024 ORTHO05D007505 1.4e-21 106.3 86 65.1
BcaB06g26149 Brassica carinata HOM05D006024 ORTHO05D007505 1.8e-21 105.9 85 65.9
Haze_23046 Corylus avellana HOM05D006024 ORTHO05D007505 1.8e-21 105.9 84 67.9
Thecc.09G223300 Theobroma cacao HOM05D006024 ORTHO05D007505 1.8e-21 105.9 88 63.6
Migut.D00559 Erythranthe guttata HOM05D006024 ORTHO05D007505 2.3e-21 105.5 86 65.1
arahy.Tifrunner.gnm1.ann1.3AB71G Arachis hypogaea HOM05D006024 ORTHO05D007505 3.0e-21 105.1 82 68.3
arahy.Tifrunner.gnm1.ann1.7L1RE9 Arachis hypogaea HOM05D006024 ORTHO05D007505 3.0e-21 105.1 82 68.3
Sopen01g002620 Solanum pennellii HOM05D006024 ORTHO05D007505 3.0e-21 105.1 87 64.4
Nn7g36060 Nelumbo nucifera HOM05D006024 ORTHO05D007505 4.0e-21 104.8 88 62.5
RcHm_v2.0_Chr5g0078111 Rosa chinensis HOM05D006024 ORTHO05D007505 4.0e-21 104.8 88 64.8
Prupe.6G018500 Prunus persica HOM05D006024 ORTHO05D007505 5.2e-21 104.4 88 63.6
THA.LOC104816910 Tarenaya hassleriana HOM05D006024 ORTHO05D007505 5.2e-21 104.4 82 68.3
MD11G1022800 Malus domestica HOM05D006024 ORTHO05D007505 6.7e-21 104.0 82 68.3
PSO339G6331 Papaver somniferum HOM05D006024 ORTHO05D007505 6.7e-21 104.0 88 60.2
Lj4g0026168 Lotus japonicus HOM05D006024 ORTHO05D007505 8.8e-21 103.6 87 63.2
Solyc01g006630.3 Solanum lycopersicum HOM05D006024 ORTHO05D007505 8.8e-21 103.6 87 63.2
MSTRG.21409 Avicennia marina HOM05D006024 ORTHO05D007505 1.5e-20 102.8 83 66.3
FvH4_3g43551 Fragaria vesca HOM05D006024 ORTHO05D007505 1.5e-20 102.8 88 63.6
FAN11G0987 Fragaria x ananassa HOM05D006024 ORTHO05D007505 1.5e-20 102.8 88 63.6
FAN11G3540 Fragaria x ananassa HOM05D006024 ORTHO05D007505 1.5e-20 102.8 88 63.6
FAN16G2307 Fragaria x ananassa HOM05D006024 ORTHO05D007505 2.0e-20 102.4 88 63.6
DCAR_002037 Daucus carota HOM05D006024 ORTHO05D007505 2.6e-20 102.1 85 63.5
Potri.003G210900 Populus trichocarpa HOM05D006024 ORTHO05D007505 2.6e-20 102.1 83 66.3
Potri.T085501 Populus trichocarpa HOM05D006024 ORTHO05D007505 2.6e-20 102.1 83 66.3
AUR62000078 Chenopodium quinoa HOM05D006024 ORTHO05D007505 3.3e-20 101.7 88 60.2
Nitab4.5_0003796g0050 Nicotiana tabacum HOM05D006024 ORTHO05D007505 3.3e-20 101.7 82 65.9
Peaxi162Scf00559g00415 Petunia axillaris HOM05D006024 ORTHO05D007505 3.3e-20 101.7 81 66.7
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 4.4e-20 101.3 87 64.4
COL.COLO4_09894 Corchorus olitorius HOM05D006024 ORTHO05D007505 5.7e-20 100.9 88 58.0
Lsat_1_v5_gn_6_50101 Lactuca sativa HOM05D006024 ORTHO05D007505 7.4e-20 100.5 86 60.5
Lj3g0007180 Lotus japonicus HOM05D006024 ORTHO05D007505 7.4e-20 100.5 87 62.1
GSVIVG01025335001 Vitis vinifera HOM05D006024 ORTHO05D007505 7.4e-20 100.5 86 62.8
AUR62019251 Chenopodium quinoa HOM05D006024 ORTHO05D007505 1.3e-19 99.8 88 59.1
Lalb_Chr24g0396941 Lupinus albus HOM05D006024 ORTHO05D007505 2.2e-19 99.0 85 62.4
Nitab4.5_0008137g0040 Nicotiana tabacum HOM05D006024 ORTHO05D007505 2.2e-19 99.0 82 64.6
TPR.G18832 Trifolium pratense HOM05D006024 ORTHO05D007505 2.2e-19 99.0 88 61.4
Duzib168G0763 Durio zibethinus HOM05D006024 ORTHO05D007505 2.8e-19 98.6 88 58.0
Hund22080 Selenicereus undatus HOM05D006024 ORTHO05D007505 2.8e-19 98.6 88 60.2
Atru.chr3.2505 Acer truncatum HOM05D006024 ORTHO05D007505 3.7e-19 98.2 83 61.4
HanXRQChr02g0056471 Helianthus annuus HOM05D006024 ORTHO05D007505 3.7e-19 98.2 85 60.0
Migut.N02293 Erythranthe guttata HOM05D006024 ORTHO05D007505 6.3e-19 97.4 92 59.8
QL01p006224 Quercus lobata HOM05D006024 ORTHO05D007505 6.3e-19 97.4 83 67.5
Sc06g0004480 Simmondsia chinensis HOM05D006024 ORTHO05D007505 6.3e-19 97.4 88 56.8
Gohir.D06G112300 Gossypium hirsutum HOM05D006024 ORTHO05D007505 8.2e-19 97.1 83 60.2
Gorai.010G128200 Gossypium raimondii HOM05D006024 ORTHO05D007505 8.2e-19 97.1 83 60.2
Phvul.005G150400 Phaseolus vulgaris HOM05D006024 ORTHO05D007505 8.2e-19 97.1 87 63.2
EL10Ac4g10317 Beta vulgaris HOM05D006024 ORTHO05D007505 1.1e-18 96.7 88 56.8
VMungo1080G1390 Vigna mungo HOM05D006024 ORTHO05D007505 1.1e-18 96.7 87 60.9
Ciclev10015756m.g Citrus clementina HOM05D006024 ORTHO05D007505 1.8e-18 95.9 83 62.7
Zm00001eb094580 Zea mays HOM05D006024 ORTHO05D007505 1.8e-18 95.9 83 57.8
Psat5g288680 Pisum sativum HOM05D006024 ORTHO05D007505 3.1e-18 95.1 86 59.3
VMungo0251G0909 Vigna mungo HOM05D006024 ORTHO05D007505 5.3e-18 94.4 87 62.1
CAN.G388.68 Capsicum annuum HOM05D006024 ORTHO05D007505 7.0e-18 94.0 80 63.8
Ca_01271_v3 Cicer arietinum L. HOM05D006024 ORTHO05D007505 1.2e-17 93.2 83 62.7
Glyma.13G342800 Glycine max HOM05D006024 ORTHO05D007505 1.2e-17 93.2 83 61.4
Gohir.A06G108500 Gossypium hirsutum HOM05D006024 ORTHO05D007505 3.5e-17 91.7 83 57.8
unitig_8.g3081 Utricularia gibba HOM05D006024 ORTHO05D007505 2.2e-16 89.0 83 59.0
Os09g0280300 Oryza sativa ssp. japonica HOM05D006024 ORTHO05D007505 6.5e-16 87.4 83 56.6
ECA233G1997 Erigeron canadensis HOM05D006024 ORTHO05D007505 8.5e-16 87.0 85 54.1
SEGI_39854 Sequoiadendron giganteum HOM05D006024 ORTHO05D007505 2.5e-15 85.5 83 55.4
Medtr2g098500 Medicago truncatula HOM05D006024 ORTHO05D007505 5.5e-15 84.3 86 55.8
ATR0605G294 Amborella trichopoda HOM05D006024 ORTHO05D007505 1.6e-14 82.8 82 54.9
SGA_v2.0_scaffold1G00800 Striga asiatica HOM05D006024 ORTHO05D007505 3.0e-13 78.6 86 54.7
Pp3c16_13070 Physcomitrium patens HOM05D006024 ORTHO05D007505 4.8e-11 71.2 91 41.8
Pp3c6_24290 Physcomitrium patens HOM05D006024 ORTHO05D007505 7.0e-10 67.4 91 41.8
SMO146G0097 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 9.1e-10 67.0 92 40.2
SMO116G0160 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 2.2e-08 62.4 83 43.4
Mapoly0150s0011 Marchantia polymorpha HOM05D006024 ORTHO05D007505 3.8e-08 61.6 90 37.8
SMO144G0113 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 3.8e-08 61.6 83 41.0
AagrBONN_evm.TU.Sc2ySwM_344.3372 Anthoceros agrestis HOM05D006024 ORTHO05D007505 1.9e-07 59.3 90 36.7
Pp3c3_20310 Physcomitrium patens HOM05D006024 ORTHO05D007505 8.0e-06 53.9 91 35.2


User provided reference genes

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