Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049490 Camellia sinensis var. sinensis HOM05D019196 ORTHO05D010845 3.9e-50 201.1 95 100.0
CSS0011456 Camellia sinensis var. sinensis HOM05D019196 ORTHO05D010845 1.6e-43 179.1 96 89.6
CSS0015409 Camellia sinensis var. sinensis HOM05D019196 ORTHO05D010845 8.2e-40 166.8 88 89.8
Sopen09g028650 Solanum pennellii HOM05D019196 ORTHO05D010845 1.1e-15 86.7 96 52.1
Oeu052072.1 Olea europaea HOM05D019196 ORTHO05D010845 2.0e-14 82.4 97 48.5
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 4.2e-12 74.7 96 42.7
CAN.G1395.1 Capsicum annuum HOM05D019196 ORTHO05D010845 1.6e-11 72.8 71 52.1
Prupe.8G216600 Prunus persica HOM05D009253 ORTHO05D010845 6.8e-10 67.4 83 49.4
Cfa002472 Carpinus fangiana HOM05D009253 ORTHO05D010845 1.2e-09 66.6 83 48.2
Rhsim01G0261100 Rhododendron simsii HOM05D000647 ORTHO05D000485 1.2e-09 66.6 89 50.6
Nn1g02939 Nelumbo nucifera HOM05D019196 ORTHO05D010845 3.4e-09 65.1 68 51.5
TPR.G2669 Trifolium pratense HOM05D009253 ORTHO05D010845 4.4e-09 64.7 92 41.3
Hma1.2p1_1112F.1_g258640 Hydrangea macrophylla HOM05D009253 ORTHO05D010845 3.7e-08 61.6 85 43.5
Glyma.10G039800 Glycine max HOM05D009253 ORTHO05D010845 4.9e-08 61.2 76 44.7
Lj5g0016892 Lotus japonicus HOM05D009253 ORTHO05D010845 4.9e-08 61.2 76 43.4
Manes.12G035800 Manihot esculenta HOM05D009253 ORTHO05D010845 1.8e-07 59.3 87 37.9
Sed0026637 Sechium edule HOM05D009253 ORTHO05D010845 3.1e-07 58.5 46 58.7
TAR362G0345 Trochodendron aralioides HOM05D009253 ORTHO05D010845 4.1e-07 58.2 96 39.6
TAR365G0673 Trochodendron aralioides HOM05D009253 ORTHO05D010845 4.1e-07 58.2 71 43.7
Manes.13G040700 Manihot esculenta HOM05D009253 ORTHO05D010845 7.0e-07 57.4 88 38.6
Sed0026815 Sechium edule HOM05D009253 ORTHO05D010845 7.0e-07 57.4 82 45.1
CiPaw.03G269700 Carya illinoinensis HOM05D009253 ORTHO05D010845 1.2e-06 56.6 78 46.2
CiPaw.04G189600 Carya illinoinensis HOM05D009253 ORTHO05D010845 1.2e-06 56.6 74 41.9
Phvul.007G190000 Phaseolus vulgaris HOM05D009253 ORTHO05D010845 5.9e-06 54.3 76 40.8
COL.COLO4_10585 Corchorus olitorius HOM05D009253 ORTHO05D010845 7.8e-06 53.9 94 40.4
CsaV3_3G028270 Cucumis sativus L. HOM05D009253 ORTHO05D010845 7.8e-06 53.9 41 68.3
RcHm_v2.0_Chr6g0286891 Rosa chinensis HOM05D009253 ORTHO05D010845 7.8e-06 53.9 96 42.7


User provided reference genes

Program Settings