Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049482 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 1.2e-83 313.5 206 100.0
vmacro08145 Vaccinium macrocarpon HOM05D000520 ORTHO05D000399 8.8e-39 164.5 220 47.7
Rhsim04G0221200 Rhododendron simsii HOM05D000520 ORTHO05D000399 1.6e-35 153.7 214 44.9
Dinv29767 Davidia involucrata HOM05D000520 ORTHO05D000399 2.5e-33 146.4 245 44.5
Hma1.2p1_2670F.1_g326640 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 2.8e-29 132.9 211 42.7
QL06p008798 Quercus lobata HOM05D000520 ORTHO05D000399 1.5e-25 120.6 226 39.4
Lj6C675T3 Lonicera japonica HOM05D000520 ORTHO05D000399 1.9e-25 120.2 206 49.5
Haze_01213 Corylus avellana HOM05D000520 ORTHO05D000399 2.3e-23 113.2 233 44.6
Migut.G00167 Erythranthe guttata HOM05D000520 ORTHO05D000399 2.0e-22 110.2 113 51.3
CiPaw.01G149000 Carya illinoinensis HOM05D000520 ORTHO05D000399 1.2e-19 100.9 228 35.1
SalBow2G0691 Salvia bowleyana HOM05D000520 ORTHO05D000399 2.0e-19 100.1 237 50.2
Cc03_g02010 Coffea canephora HOM05D000520 ORTHO05D000399 7.8e-19 98.2 255 43.1
Oeu037750.1 Olea europaea HOM05D000520 ORTHO05D000399 2.3e-18 96.7 205 41.0
Migut.G00271 Erythranthe guttata HOM05D000520 ORTHO05D000399 5.0e-18 95.5 246 34.1
MSTRG.3922 Avicennia marina HOM05D000520 ORTHO05D000399 8.6e-18 94.7 236 41.9
DCAR_024565 Daucus carota HOM05D000520 ORTHO05D000399 2.5e-17 93.2 229 38.4
Peaxi162Scf00498g00727 Petunia axillaris HOM05D000520 ORTHO05D000399 3.3e-17 92.8 112 47.3
Nitab4.5_0005076g0030 Nicotiana tabacum HOM05D000520 ORTHO05D000399 5.6e-17 92.0 111 49.5
Nitab4.5_0000960g0090 Nicotiana tabacum HOM05D000520 ORTHO05D000399 7.3e-17 91.7 111 49.5
MSTRG.10091 Avicennia marina HOM05D000520 ORTHO05D000399 3.6e-16 89.4 245 33.1
PGSC0003DMG400011344 Solanum tuberosum HOM05D000520 ORTHO05D000399 2.3e-15 86.7 115 47.8
GSVIVG01017753001 Vitis vinifera HOM05D000520 ORTHO05D000399 3.1e-15 86.3 233 36.9
TAR636G3055 Trochodendron aralioides HOM05D000520 ORTHO05D000399 1.2e-14 84.3 232 41.4
CAN.G129.22 Capsicum annuum HOM05D000520 ORTHO05D000399 2.0e-14 83.6 111 46.8
Lsat_1_v5_gn_5_53640 Lactuca sativa HOM05D000520 ORTHO05D000399 1.3e-13 80.9 104 44.2
Lj6g0005585 Lotus japonicus HOM05D000520 ORTHO05D000399 1.3e-13 80.9 214 49.1
Manes.15G012800 Manihot esculenta HOM05D000520 ORTHO05D000399 2.9e-13 79.7 222 33.3
HanXRQChr13g0411351 Helianthus annuus HOM05D000520 ORTHO05D000399 6.4e-13 78.6 222 41.9
ECA240G3178 Erigeron canadensis HOM05D000520 ORTHO05D000399 8.3e-13 78.2 219 35.2
HanXRQChr03g0080771 Helianthus annuus HOM05D000520 ORTHO05D000399 1.1e-12 77.8 218 38.1
Ca_01940_v3 Cicer arietinum L. HOM05D000520 ORTHO05D000399 4.1e-12 75.9 221 33.9
Potri.010G024700 Populus trichocarpa HOM05D000520 ORTHO05D000399 7.0e-12 75.1 221 39.4
Manes.03G194600 Manihot esculenta HOM05D000520 ORTHO05D000399 1.6e-11 73.9 227 29.1
Solyc01g066880.3 Solanum lycopersicum HOM05D000520 ORTHO05D000399 1.6e-11 73.9 102 45.1
Sabra10G0014300 Salix brachista HOM05D000520 ORTHO05D000399 2.7e-11 73.2 215 33.0
Medtr4g119820 Medicago truncatula HOM05D000520 ORTHO05D000399 3.5e-11 72.8 109 43.1
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 4.6e-11 72.4 223 28.3
Medtr2g436830 Medicago truncatula HOM05D000520 ORTHO05D000399 1.0e-10 71.2 231 38.1
Nn4g25875 Nelumbo nucifera HOM05D000520 ORTHO05D000399 1.0e-10 71.2 109 41.3
TPR.G13851 Trifolium pratense HOM05D000520 ORTHO05D000399 1.7e-10 70.5 218 38.1
CSS0021736 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 2.3e-10 70.1 227 44.9
SGA_v2.0_scaffold67G22639 Striga asiatica HOM05D000520 ORTHO05D000399 2.3e-10 70.1 110 45.5
MBI18_g04688_MAGBIO Magnolia biondii HOM05D000520 ORTHO05D000399 3.9e-10 69.3 77 50.6
Sopen01g028480 Solanum pennellii HOM05D000520 ORTHO05D000399 3.9e-10 69.3 102 44.1
Lalb_Chr13g0303641 Lupinus albus HOM05D000520 ORTHO05D000399 5.0e-10 68.9 219 31.1
BcaC04g22039 Brassica carinata HOM05D000520 ORTHO05D000399 6.6e-10 68.6 103 40.8
C09p24200 Brassica napus HOM05D000520 ORTHO05D000399 6.6e-10 68.6 103 40.8
BolC9t55337H Brassica oleracea HOM05D000520 ORTHO05D000399 6.6e-10 68.6 103 40.8
Phvul.007G196900 Phaseolus vulgaris HOM05D000520 ORTHO05D000399 8.6e-10 68.2 98 42.9
TPR.G3180 Trifolium pratense HOM05D000520 ORTHO05D000399 8.6e-10 68.2 236 36.0
VMungo1215G1385 Vigna mungo HOM05D000520 ORTHO05D000399 8.6e-10 68.2 85 43.5
A09p19190 Brassica napus HOM05D000520 ORTHO05D000399 1.5e-09 67.4 88 43.2
BraA09t37537Z Brassica rapa HOM05D000520 ORTHO05D000399 1.5e-09 67.4 88 43.2
EL10Ac4g09925 Beta vulgaris HOM05D000520 ORTHO05D000399 2.5e-09 66.6 103 38.8
BcaB07g31116 Brassica carinata HOM05D000520 ORTHO05D000399 2.5e-09 66.6 83 44.6
Sc16g0008600 Simmondsia chinensis HOM05D000520 ORTHO05D000399 2.5e-09 66.6 73 45.2
Psat1g153560 Pisum sativum HOM05D000520 ORTHO05D000399 3.3e-09 66.2 234 38.0
AUR62005195 Chenopodium quinoa HOM05D000520 ORTHO05D000399 4.3e-09 65.9 82 45.1
Gohir.A11G267400 Gossypium hirsutum HOM05D000520 ORTHO05D000399 5.6e-09 65.5 106 36.8
CARHR289750 Cardamine hirsuta HOM05D000520 ORTHO05D000399 7.3e-09 65.1 91 42.9
Gohir.D08G225800 Gossypium hirsutum HOM05D000520 ORTHO05D000399 7.3e-09 65.1 245 34.7
EL10Ac3g06590 Beta vulgaris HOM05D000520 ORTHO05D000399 9.5e-09 64.7 211 30.3
Lj4g0021507 Lotus japonicus HOM05D000520 ORTHO05D000399 9.5e-09 64.7 105 41.9
Thhalv10023508m.g Eutrema salsugineum HOM05D000520 ORTHO05D000399 1.2e-08 64.3 90 42.2
PGSC0003DMG400024753 Solanum tuberosum HOM05D000520 ORTHO05D000399 1.2e-08 64.3 111 38.7
Cc02_g33120 Coffea canephora HOM05D000520 ORTHO05D000399 1.6e-08 63.9 86 44.2
Phvul.003G104900 Phaseolus vulgaris HOM05D000520 ORTHO05D000399 1.6e-08 63.9 85 40.0
Glyma.15G147400 Glycine max HOM05D000520 ORTHO05D000399 2.1e-08 63.5 211 42.2
Aa31LG2G11670 Aethionema arabicum HOM05D000520 ORTHO05D000399 2.8e-08 63.2 78 44.9
Duzib177G0908 Durio zibethinus HOM05D000520 ORTHO05D000399 2.8e-08 63.2 79 41.8
Gorai.004G239800 Gossypium raimondii HOM05D000520 ORTHO05D000399 2.8e-08 63.2 247 36.0
Manes.08G118400 Manihot esculenta HOM05D000520 ORTHO05D000399 2.8e-08 63.2 114 37.7
Nitab4.5_0006988g0010 Nicotiana tabacum HOM05D000520 ORTHO05D000399 2.8e-08 63.2 78 42.3
Ah.04g161080 Amaranthus hybridus HOM05D000520 ORTHO05D000399 4.7e-08 62.4 81 46.9
Carub.0002s0803 Capsella rubella HOM05D000520 ORTHO05D000399 4.7e-08 62.4 77 46.8
AUR62000774 Chenopodium quinoa HOM05D000520 ORTHO05D000399 4.7e-08 62.4 87 41.4
Gorai.007G299600 Gossypium raimondii HOM05D000520 ORTHO05D000399 4.7e-08 62.4 106 36.8
Sp2g06720 Schrenkiella parvula HOM05D000520 ORTHO05D000399 4.7e-08 62.4 91 40.7
Sc09g0002980 Simmondsia chinensis HOM05D000520 ORTHO05D000399 6.2e-08 62.0 98 36.7
Thecc.05G312300 Theobroma cacao HOM05D000520 ORTHO05D000399 6.2e-08 62.0 82 43.9
vmacro22973 Vaccinium macrocarpon HOM05D000520 ORTHO05D000399 1.4e-07 60.8 53 56.6
Glyma.09G045200 Glycine max HOM05D000520 ORTHO05D000399 1.8e-07 60.5 217 37.3
Lalb_Chr07g0177721 Lupinus albus HOM05D000520 ORTHO05D000399 1.8e-07 60.5 215 29.3
CSS0032030 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 2.3e-07 60.1 125 38.4
AL1G65730 Arabidopsis lyrata HOM05D000520 ORTHO05D000399 3.1e-07 59.7 91 41.8
AT1G56210 Arabidopsis thaliana HOM05D000520 ORTHO05D000399 3.1e-07 59.7 79 46.8
COL.COLO4_10512 Corchorus olitorius HOM05D000520 ORTHO05D000399 3.1e-07 59.7 81 39.5
Gohir.D11G277400 Gossypium hirsutum HOM05D000520 ORTHO05D000399 3.1e-07 59.7 119 36.1
Ah.04g153860 Amaranthus hybridus HOM05D000520 ORTHO05D000399 4.0e-07 59.3 108 38.0
Phvul.009G247600 Phaseolus vulgaris HOM05D000520 ORTHO05D000399 4.0e-07 59.3 210 39.0
SalBow7G2560 Salvia bowleyana HOM05D000520 ORTHO05D000399 4.0e-07 59.3 69 46.4
Psat4g025800 Pisum sativum HOM05D000520 ORTHO05D000399 5.2e-07 58.9 237 30.0
CSS0034702 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 6.8e-07 58.5 90 41.1
Sabra13G0016700 Salix brachista HOM05D000520 ORTHO05D000399 6.8e-07 58.5 114 35.1
Sabra13G0020700 Salix brachista HOM05D000520 ORTHO05D000399 6.8e-07 58.5 114 35.1
VMungo1309G2144 Vigna mungo HOM05D000520 ORTHO05D000399 6.8e-07 58.5 212 33.0
MELO3C006660.2 Cucumis melo HOM05D000520 ORTHO05D000399 8.9e-07 58.2 222 26.1
CsaV3_2G006610 Cucumis sativus L. HOM05D000520 ORTHO05D000399 8.9e-07 58.2 103 35.9
Gohir.A08G208900 Gossypium hirsutum HOM05D000520 ORTHO05D000399 8.9e-07 58.2 245 33.5
Actinidia21490 Actinidia chinensis HOM05D000520 ORTHO05D000399 1.2e-06 57.8 111 36.0
Glyma.07G248100 Glycine max HOM05D000520 ORTHO05D000399 1.2e-06 57.8 230 43.5
Psat6g150440 Pisum sativum HOM05D000520 ORTHO05D000399 1.2e-06 57.8 86 39.5
arahy.Tifrunner.gnm1.ann1.AKZT21 Arachis hypogaea HOM05D000520 ORTHO05D000399 2.0e-06 57.0 219 33.3
CDE11G0338 Ceratophyllum demersum HOM05D000520 ORTHO05D000399 3.4e-06 56.2 91 44.0
Hma1.2p1_1292F.1_g273650 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 3.4e-06 56.2 114 36.0
Hma1.2p1_1374F.1_g278785 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 3.4e-06 56.2 114 36.0
Ciclev10001480m.g Citrus clementina HOM05D000520 ORTHO05D000399 4.4e-06 55.8 66 45.5
CsaV3_3G014590 Cucumis sativus L. HOM05D000520 ORTHO05D000399 4.4e-06 55.8 222 25.7
Duzib128G0684 Durio zibethinus HOM05D000520 ORTHO05D000399 4.4e-06 55.8 263 25.1
Glyma.10G152100 Glycine max HOM05D000520 ORTHO05D000399 4.4e-06 55.8 73 41.1
VMungo0720G1715 Vigna mungo HOM05D000520 ORTHO05D000399 5.8e-06 55.5 85 37.6
Atru.chr2.24 Acer truncatum HOM05D000520 ORTHO05D000399 7.5e-06 55.1 89 38.2
Actinidia19782 Actinidia chinensis HOM05D000520 ORTHO05D000399 7.5e-06 55.1 121 35.5
ClCG05G006050 Citrullus lanatus HOM05D000520 ORTHO05D000399 7.5e-06 55.1 223 28.7
Thhalv10004455m.g Eutrema salsugineum HOM05D000520 ORTHO05D000399 7.5e-06 55.1 91 37.4
PSO210G6472 Papaver somniferum HOM05D000520 ORTHO05D000399 7.5e-06 55.1 96 38.5
Ah.13g074900 Amaranthus hybridus HOM05D000520 ORTHO05D000399 9.9e-06 54.7 103 37.9


User provided reference genes

Program Settings