Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 1.7e-154 549.3 279 100.0
CSS0010964 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 7.4e-105 384.4 273 76.2
CSS0038469 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 1.2e-102 377.1 292 72.9
CSS0021689 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 5.1e-90 335.1 304 63.8
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 2.5e-44 183.3 162 64.8
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 8.0e-43 178.3 163 64.4
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 7.0e-39 165.2 153 61.4
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 1.1e-31 141.4 301 34.6
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 1.3e-24 117.9 290 32.4
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 2.4e-23 113.6 312 30.4
Oeu029662.1 Olea europaea HOM05D009091 ORTHO05D003768 3.5e-22 109.8 156 41.0
RcHm_v2.0_Chr4g0433611 Rosa chinensis HOM05D009091 ORTHO05D003768 1.3e-21 107.8 203 36.5
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 8.6e-21 105.1 231 31.6
FvH4_5g37213 Fragaria vesca HOM05D008321 ORTHO05D010380 2.5e-20 103.6 212 32.1
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 5.6e-20 102.4 295 30.8
FAN08G3223 Fragaria x ananassa HOM05D009091 ORTHO05D003768 9.5e-20 101.7 191 34.6
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 9.5e-20 101.7 316 29.7
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 4.7e-19 99.4 286 30.1
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 3.1e-18 96.7 271 30.3
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 5.2e-18 95.9 220 31.4
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 6.8e-18 95.5 256 30.9
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 2.0e-17 94.0 223 32.3
FvH4_4g10363 Fragaria vesca HOM05D008321 ORTHO05D003768 4.4e-17 92.8 206 35.0
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 5.8e-17 92.4 295 28.5
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 1.3e-16 91.3 278 30.2
FAN22G1616 Fragaria x ananassa HOM05D009091 ORTHO05D003768 1.7e-16 90.9 129 41.1
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 4.9e-16 89.4 276 29.3
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 6.4e-16 89.0 220 31.4
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.4e-16 89.0 283 30.7
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 1.1e-15 88.2 140 40.0
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 1.4e-15 87.8 53 83.0
RcHm_v2.0_Chr4g0420561 Rosa chinensis HOM05D009091 ORTHO05D003768 1.4e-15 87.8 214 32.7
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 1.9e-15 87.4 181 35.4
Rhsim03G0123400 Rhododendron simsii HOM05D007314 ORTHO05D010380 7.1e-15 85.5 229 28.4
RcHm_v2.0_Chr3g0496631 Rosa chinensis HOM05D009091 ORTHO05D003768 7.1e-15 85.5 123 39.8
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 9.2e-15 85.1 158 36.1
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.6e-14 84.3 53 81.1
FvH4_4g15323 Fragaria vesca HOM05D008321 ORTHO05D010380 1.7e-13 80.9 197 32.5
FvH4_6g20173 Fragaria vesca HOM05D008321 ORTHO05D010380 1.7e-13 80.9 115 39.1
FAN16G3103 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.7e-13 80.9 176 35.2
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 2.3e-13 80.5 301 30.6
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 5.1e-13 79.3 179 33.5
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.5e-12 77.8 284 27.5
Oeu050751.1 Olea europaea HOM05D009091 ORTHO05D003768 1.9e-12 77.4 200 31.5
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 2.5e-12 77.0 285 26.3
FAN18G1459 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.5e-12 77.0 183 31.7
Oeu048290.1 Olea europaea HOM05D009091 ORTHO05D003768 4.3e-12 76.3 124 37.9
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 1.6e-11 74.3 248 28.6
FvH4_5g18423 Fragaria vesca HOM05D009091 ORTHO05D000062 2.8e-11 73.6 217 29.0
MBI13_g31587_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 4.7e-11 72.8 136 33.8
RcHm_v2.0_Chr7g0231331 Rosa chinensis HOM05D009091 ORTHO05D003768 4.7e-11 72.8 149 33.6
Aqoxy1G02807 Aquilegia oxysepala HOM05D008321 ORTHO05D003768 6.2e-11 72.4 274 27.7
FAN11G2121 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.1e-11 72.0 131 36.6
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 1.8e-10 70.9 241 28.2
Oeu016711.1 Olea europaea HOM05D023826 ORTHO05D003768 2.4e-10 70.5 159 32.1
CSS0009587 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 3.1e-10 70.1 103 48.5
CSS0011469 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 3.1e-10 70.1 103 48.5
MBI05_g09172_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 4.0e-10 69.7 113 38.1
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 5.2e-10 69.3 175 32.0
CANSAT25G0318 Cannabis sativa HOM05D007314 ORTHO05D010380 8.9e-10 68.6 118 40.7
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 8.9e-10 68.6 215 27.4
Rhsim05G0198600 Rhododendron simsii HOM05D000030 ORTHO05D003768 8.9e-10 68.6 150 33.3
FAN23G0987 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.2e-09 68.2 125 39.2
FAN28G0089 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.2e-09 68.2 115 37.4
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 1.2e-09 68.2 242 26.9
Rhsim04G0083300 Rhododendron simsii HOM05D007314 ORTHO05D010380 2.0e-09 67.4 217 28.6
CSS0033653 Camellia sinensis var. sinensis HOM05D034359 ORTHO05D003768 2.6e-09 67.0 86 46.5
MBI06_g34258_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 2.6e-09 67.0 98 39.8
Oeu047507.2 Olea europaea HOM05D007314 ORTHO05D003768 1.3e-08 64.7 138 34.8
MBI15_g20147_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 1.7e-08 64.3 219 27.4
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 1.7e-08 64.3 207 26.6
BolC4t24885H Brassica oleracea HOM05D031530 ORTHO05D023934 3.8e-08 63.2 116 37.1
Oeu040990.1 Olea europaea HOM05D000700 ORTHO05D000397 4.9e-08 62.8 139 32.4
RcHm_v2.0_Chr1g0357501 Rosa chinensis HOM05D009091 ORTHO05D003768 4.9e-08 62.8 136 34.6
CSS0018917 Camellia sinensis var. sinensis HOM05D034359 ORTHO05D003768 1.1e-07 61.6 84 46.4
CSS0036287 Camellia sinensis var. sinensis HOM05D034359 ORTHO05D003768 1.1e-07 61.6 84 46.4
MBI16_g00642_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 1.9e-07 60.8 114 36.0
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.9e-07 60.8 185 27.0
TAR633G2694 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.9e-07 60.8 238 26.1
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 2.4e-07 60.5 122 35.2
FAN08G2819 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.4e-07 60.5 134 32.8
MBI16_g35338_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 2.4e-07 60.5 166 30.1
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 2.4e-07 60.5 199 25.6
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.1e-07 59.7 278 24.1
FAN09G3563 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.1e-07 59.7 105 33.3
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.4e-07 59.3 264 26.5
FAN21G0782 Fragaria x ananassa HOM05D008321 ORTHO05D003768 5.4e-07 59.3 87 41.4
Rhsim02G0039900 Rhododendron simsii HOM05D007314 ORTHO05D003768 5.4e-07 59.3 111 36.0
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 9.2e-07 58.5 227 24.7
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 9.2e-07 58.5 158 29.7
FAN22G0652 Fragaria x ananassa HOM05D008321 ORTHO05D003768 9.2e-07 58.5 134 30.6
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 1.2e-06 58.2 221 29.4
FvH4_4g03221 Fragaria vesca HOM05D000014 ORTHO05D000016 1.6e-06 57.8 147 32.0
RcHm_v2.0_Chr7g0196691 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-06 57.8 263 26.2
TWI53G0470 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 1.6e-06 57.8 118 33.1
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 2.1e-06 57.4 218 27.1
MBI06_g45493_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 2.1e-06 57.4 187 25.1
RcHm_v2.0_Chr7g0191841 Rosa chinensis HOM05D000539 ORTHO05D000233 2.1e-06 57.4 242 26.4
MELO3C027838.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.7e-06 57.0 115 33.9
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 2.7e-06 57.0 145 29.7
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 2.7e-06 57.0 265 24.2
FAN03G1875 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.7e-06 57.0 137 31.4
Cpa.g.sc113.47 Carica papaya HOM05D005763 ORTHO05D005970 3.5e-06 56.6 174 25.9
Nn4g24072 Nelumbo nucifera HOM05D001309 ORTHO05D000385 3.5e-06 56.6 183 26.2
Sed0001469 Sechium edule HOM05D007314 ORTHO05D003768 3.5e-06 56.6 108 38.0
Sed0011465 Sechium edule HOM05D007314 ORTHO05D003768 3.5e-06 56.6 108 38.0
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 4.6e-06 56.2 221 25.8
FAN16G0148 Fragaria x ananassa HOM05D008321 ORTHO05D003768 6.0e-06 55.8 76 36.8
Oeu021350.1 Olea europaea HOM05D023826 ORTHO05D003768 6.0e-06 55.8 85 40.0
Lsat_1_v5_gn_9_120341 Lactuca sativa HOM05D000539 ORTHO05D000233 7.8e-06 55.5 215 27.4
RcHm_v2.0_Chr1g0318231 Rosa chinensis HOM05D000539 ORTHO05D000233 7.8e-06 55.5 243 28.4
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 7.8e-06 55.5 193 31.1


User provided reference genes

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