Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 1.9e-62 242.3 115 100.0
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 1.9e-62 242.3 115 100.0
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 2.1e-42 175.6 112 75.0
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 1.1e-41 173.3 113 74.3
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 1.3e-39 166.4 115 72.2
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 3.5e-37 158.3 110 66.4
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 3.5e-37 158.3 110 67.3
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 7.9e-37 157.1 109 65.1
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 1.0e-36 156.8 113 65.5
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 1.0e-36 156.8 116 68.1
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 1.0e-36 156.8 110 66.4
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 5.1e-36 154.5 107 67.3
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 8.7e-36 153.7 110 68.2
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.1e-35 153.3 107 67.3
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 3.3e-35 151.8 109 67.0
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 5.6e-35 151.0 107 66.4
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 5.6e-35 151.0 107 66.4
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 9.6e-35 150.2 112 65.2
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 1.6e-34 149.4 110 65.5
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 2.1e-34 149.1 113 62.8
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 2.1e-34 149.1 108 65.7
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 2.1e-34 149.1 109 65.1
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 2.8e-34 148.7 111 64.0
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 4.8e-34 147.9 110 65.5
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 6.2e-34 147.5 113 62.8
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 6.2e-34 147.5 111 66.7
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 6.2e-34 147.5 112 63.4
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 1.4e-33 146.4 111 64.0
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 5.3e-33 144.4 113 63.7
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 5.3e-33 144.4 114 64.9
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 6.9e-33 144.1 108 67.6
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 9.0e-33 143.7 115 60.9
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 9.0e-33 143.7 114 64.0
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.2e-32 143.3 109 64.2
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 2.0e-32 142.5 109 61.5
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 2.6e-32 142.1 108 63.0
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 3.4e-32 141.7 109 61.5
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 3.4e-32 141.7 110 64.5
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 4.5e-32 141.4 112 60.7
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 4.5e-32 141.4 113 64.6
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 7.6e-32 140.6 111 63.1
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 1.3e-31 139.8 110 61.8
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.3e-31 139.8 109 62.4
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 1.3e-31 139.8 110 66.4
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 2.2e-31 139.0 109 62.4
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 2.9e-31 138.7 110 61.8
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 3.8e-31 138.3 112 58.9
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 4.9e-31 137.9 108 63.0
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 4.9e-31 137.9 110 60.0
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 8.4e-31 137.1 113 61.9
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 8.4e-31 137.1 108 60.2
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 1.1e-30 136.7 109 60.6
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 1.4e-30 136.3 108 60.2
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 1.9e-30 136.0 112 62.5
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 1.9e-30 136.0 107 62.6
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 2.5e-30 135.6 110 63.6
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 3.2e-30 135.2 108 60.2
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 9.3e-30 133.7 112 58.9
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 9.3e-30 133.7 107 60.7
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 9.3e-30 133.7 110 56.4
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 1.6e-29 132.9 108 59.3
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 2.1e-29 132.5 105 61.0
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 2.7e-29 132.1 109 59.6
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 2.7e-29 132.1 110 57.3
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 2.7e-29 132.1 112 58.0
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 3.5e-29 131.7 110 57.3
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 4.6e-29 131.3 106 57.5
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 4.6e-29 131.3 108 57.4
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 6.0e-29 131.0 110 60.9
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 6.0e-29 131.0 110 57.3
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 1.8e-28 129.4 111 55.0
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 3.0e-28 128.6 83 72.3
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 5.1e-28 127.9 110 52.7
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 8.7e-28 127.1 109 56.0
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 1.5e-27 126.3 99 63.6
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 1.9e-27 125.9 109 57.8
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 3.3e-27 125.2 109 59.6
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 1.6e-26 122.9 108 53.7
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 1.6e-26 122.9 108 53.7
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 1.6e-26 122.9 120 50.0
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 2.1e-26 122.5 108 52.8
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 3.7e-26 121.7 108 52.8
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 1.4e-25 119.8 108 52.8
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 1.8e-25 119.4 108 51.9
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 2.4e-25 119.0 108 51.9
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 2.4e-25 119.0 108 51.9
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 2.4e-25 119.0 73 75.3
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 3.1e-25 118.6 108 51.9
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 3.1e-25 118.6 108 51.9
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 3.1e-25 118.6 100 59.0
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 5.3e-25 117.9 73 75.3
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 1.7e-23 112.8 108 50.9
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 1.4e-22 109.8 65 75.4
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 4.2e-22 108.2 109 52.3
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.2e-21 106.7 99 57.6
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 1.2e-21 106.7 108 49.1
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 5.7e-19 97.8 110 51.8
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 4.8e-18 94.7 106 43.4
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 3.1e-17 92.0 66 65.2
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 9.0e-17 90.5 56 75.0
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 1.1e-14 83.6 111 36.0
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 6.1e-13 77.8 107 39.3
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 5.1e-12 74.7 106 36.8
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 2.4e-09 65.9 36 86.1
Rhsim10G0056400 Rhododendron simsii HOM05D007430 ORTHO05D009322 4.1e-09 65.1 53 62.3
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 2.5e-06 55.8 72 38.9


User provided reference genes

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