Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049419 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.4e-141 504.6 251 100.0
CSS0034390 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.1e-81 305.1 308 57.8
CSS0017719 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.0e-68 261.9 310 52.3
CSS0027273 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.2e-55 219.9 299 51.2
CSS0047343 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.8e-49 200.3 344 42.2
CSS0048548 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.4e-30 135.6 181 49.7
CSS0030596 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.0e-30 135.2 188 47.9
CSS0031580 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.5e-27 125.6 189 46.0
Rhsim10G0079000 Rhododendron simsii HOM05D000176 ORTHO05D003511 9.8e-24 114.8 202 37.1
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 1.7e-20 104.0 231 32.9
CsaV3_5G039840 Cucumis sativus L. HOM05D000176 ORTHO05D000106 2.5e-19 100.1 228 32.0
MELO3C033541.2 Cucumis melo HOM05D000176 ORTHO05D000106 7.3e-19 98.6 231 31.6
MELO3C027326.2 Cucumis melo HOM05D000176 ORTHO05D000106 3.4e-16 89.7 205 32.2
GSVIVG01026490001 Vitis vinifera HOM05D000176 ORTHO05D000106 4.1e-14 82.8 152 36.2
QL02p103239 Quercus lobata HOM05D000176 ORTHO05D000106 3.9e-12 76.3 227 28.6
MELO3C033724.2 Cucumis melo HOM05D000176 ORTHO05D000106 4.3e-11 72.8 220 28.6
MELO3C022946.2 Cucumis melo HOM05D000176 ORTHO05D000106 5.6e-11 72.4 220 29.1
CsaV3_5G015580 Cucumis sativus L. HOM05D000176 ORTHO05D000106 5.6e-11 72.4 220 29.1
Rhsim10G0041500 Rhododendron simsii HOM05D000176 ORTHO05D000106 3.6e-10 69.7 200 27.0
ClCG11G000230 Citrullus lanatus HOM05D000176 ORTHO05D000106 4.7e-10 69.3 215 28.8
CARHR037760 Cardamine hirsuta HOM05D000176 ORTHO05D003511 1.0e-09 68.2 212 29.2
AL1G54690 Arabidopsis lyrata HOM05D000176 ORTHO05D003511 1.8e-09 67.4 212 29.2
Sp1g35090 Schrenkiella parvula HOM05D000176 ORTHO05D003511 1.8e-09 67.4 212 29.2
Sed0014738 Sechium edule HOM05D000176 ORTHO05D000106 1.8e-09 67.4 224 28.1
THA.LOC104802612 Tarenaya hassleriana HOM05D000176 ORTHO05D003511 1.8e-09 67.4 212 29.2
AT1G48120 Arabidopsis thaliana HOM05D000176 ORTHO05D003511 2.3e-09 67.0 212 29.2
MELO3C027925.2 Cucumis melo HOM05D000176 ORTHO05D000106 2.3e-09 67.0 131 32.8
Aa31LG10G5620 Aethionema arabicum HOM05D000176 ORTHO05D003511 4.0e-09 66.2 212 29.2
Carub.0001s3722 Capsella rubella HOM05D000176 ORTHO05D003511 6.8e-09 65.5 212 29.2
C06p02530 Brassica napus HOM05D000176 ORTHO05D003511 8.9e-09 65.1 223 28.3
BolC6t35381H Brassica oleracea HOM05D000176 ORTHO05D003511 8.9e-09 65.1 223 28.3
CSS0007859 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.9e-09 65.1 134 33.6
CSS0026252 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.9e-09 65.1 134 33.6
CSS0035420 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.9e-09 65.1 134 33.6
MELO3C030021.2 Cucumis melo HOM05D000176 ORTHO05D000106 8.9e-09 65.1 171 28.1
A06p04680 Brassica napus HOM05D000176 ORTHO05D003511 1.5e-08 64.3 212 29.2
BraA06t23671Z Brassica rapa HOM05D000176 ORTHO05D003511 1.5e-08 64.3 212 29.2
MELO3C030761.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.5e-08 64.3 102 37.3
Thhalv10011184m.g Eutrema salsugineum HOM05D000176 ORTHO05D003511 1.5e-08 64.3 212 28.8
CSS0042023 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.4e-08 62.8 136 33.8
MELO3C027673.2 Cucumis melo HOM05D000176 ORTHO05D000106 4.4e-08 62.8 180 28.9
MELO3C028357.2 Cucumis melo HOM05D000176 ORTHO05D000106 9.8e-08 61.6 112 38.4
Sed0010925 Sechium edule HOM05D000176 ORTHO05D000106 9.8e-08 61.6 147 29.3
RhsimUnG0135500 Rhododendron simsii HOM05D010733 ORTHO05D000106 2.2e-07 60.5 224 28.1
Cc03_g15950 Coffea canephora HOM05D000176 ORTHO05D003511 2.9e-07 60.1 206 25.7
ClCG09G013770 Citrullus lanatus HOM05D000176 ORTHO05D000106 3.7e-07 59.7 173 31.2
Rhsim05G0077700 Rhododendron simsii HOM05D000176 ORTHO05D000106 3.7e-07 59.7 223 26.5
RhsimUnG0046100 Rhododendron simsii HOM05D000176 ORTHO05D000106 3.7e-07 59.7 217 27.6
CSS0006340 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.4e-07 58.9 145 31.0
MELO3C031405.2 Cucumis melo HOM05D000176 ORTHO05D000106 6.4e-07 58.9 102 37.3
CSS0030233 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.3e-07 58.5 157 29.9
Oeu049413.1 Olea europaea HOM05D000176 ORTHO05D000106 1.1e-06 58.2 209 27.3
Oeu049416.1 Olea europaea HOM05D000176 ORTHO05D000106 1.1e-06 58.2 209 27.3
RhsimUnG0202400 Rhododendron simsii HOM05D000176 ORTHO05D000106 1.1e-06 58.2 224 26.8
MSTRG.13026 Avicennia marina HOM05D000176 ORTHO05D000106 1.4e-06 57.8 156 30.8
Oeu017988.1 Olea europaea HOM05D000176 ORTHO05D000106 1.4e-06 57.8 156 29.5
CSS0007867 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.9e-06 57.4 157 29.3
CSS0017905 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.9e-06 57.4 137 31.4
CSS0024646 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.4e-06 57.0 157 29.3
Migut.M01636 Erythranthe guttata HOM05D000176 ORTHO05D000106 2.4e-06 57.0 156 30.1
Rhsim03G0028500 Rhododendron simsii HOM05D000176 ORTHO05D000106 2.4e-06 57.0 156 29.5
RhsimUnG0097200 Rhododendron simsii HOM05D010733 ORTHO05D000106 2.4e-06 57.0 188 28.7
CSS0006036 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.2e-06 56.6 157 29.3
CSS0009485 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.2e-06 56.6 157 29.3
CSS0010546 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.2e-06 56.6 157 29.3
CSS0011501 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.2e-06 56.6 157 29.3
CSS0024487 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.2e-06 56.6 157 29.3
CSS0026564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.2e-06 56.6 157 29.3
CSS0036437 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.2e-06 56.6 157 29.3
CSS0038560 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.2e-06 56.6 157 29.3
CSS0049971 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.2e-06 56.6 157 29.3
CSS0004167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.4e-06 55.8 157 29.3
CSS0048918 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.2e-06 55.1 157 28.7


User provided reference genes

Program Settings