Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049413 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 7.7e-46 186.8 95 100.0
CSS0009938 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.2e-26 120.9 91 72.5
CSS0042171 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.0e-22 109.0 74 73.0
CSS0025354 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.2e-21 105.5 74 68.9
CSS0002016 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.8e-21 104.8 74 68.9
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.2e-20 101.7 74 64.9
CSS0035882 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.2e-20 101.3 74 66.2
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.2e-20 101.3 74 64.9
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.2e-20 101.3 74 64.9
CSS0046979 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.5e-20 100.9 74 66.2
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 9.4e-20 100.1 74 63.5
CSS0018761 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.2e-19 99.8 74 66.2
CSS0009610 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.1e-19 99.0 74 64.9
CSS0047666 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.0e-18 96.7 74 66.2
CSS0001150 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.4e-18 96.3 74 64.9
CSS0041454 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.7e-16 88.2 82 52.4
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.1e-15 86.7 74 59.5
Rhsim10G0179600 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.8e-15 85.9 74 59.5
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.1e-15 85.1 74 59.5
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.1e-15 85.1 63 63.5
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.6e-14 82.8 63 61.9
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.5e-14 81.6 63 61.9
Rhsim12G0049700 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.0e-13 77.8 74 54.1
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 9.5e-12 73.6 62 58.1
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 2.1e-11 72.4 62 58.1
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 8.0e-11 70.5 62 56.5
MELO3C030315.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.3e-10 68.9 62 54.8
Psat0ss1196g0040 Pisum sativum HOM05D007230 ORTHO05D004756 4.0e-10 68.2 66 51.5
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 6.8e-10 67.4 62 54.8
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 1.5e-09 66.2 62 53.2
MELO3C031996.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.0e-09 65.9 77 46.8
MELO3C029711.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.7e-09 64.3 63 47.6
MELO3C032792.2 Cucumis melo HOM05D007230 ORTHO05D004756 7.5e-09 63.9 63 47.6
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 1.7e-08 62.8 62 51.6
MELO3C029660.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.2e-08 62.4 63 49.2
Psat0s1792g0040 Pisum sativum HOM05D000659 ORTHO05D000505 2.2e-08 62.4 62 51.6
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.8e-08 62.0 63 47.6
MELO3C031511.2 Cucumis melo HOM05D007230 ORTHO05D004756 8.3e-08 60.5 63 46.0
Psat5g096800 Pisum sativum HOM05D007230 ORTHO05D004756 8.3e-08 60.5 53 56.6
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-07 60.1 63 46.0
MELO3C033490.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-07 60.1 57 47.4
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.8e-07 59.3 51 52.9
MELO3C030889.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.1e-07 58.5 55 52.7
CSS0037544 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.0e-07 57.4 35 80.0
MELO3C032600.2 Cucumis melo HOM05D007230 ORTHO05D004756 9.2e-07 57.0 56 51.8


User provided reference genes

Program Settings