Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049408 Camellia sinensis var. sinensis HOM05D005114 ORTHO05D006301 1.1e-87 326.6 166 100.0
CSS0034975 Camellia sinensis var. sinensis HOM05D005114 ORTHO05D006301 2.9e-64 248.8 147 88.4
TAR376G1108 Trochodendron aralioides HOM05D005114 ORTHO05D006301 4.8e-35 151.8 148 57.4
Migut.N01364 Erythranthe guttata HOM05D005114 ORTHO05D006301 2.9e-32 142.5 149 55.7
Duzib248G1587 Durio zibethinus HOM05D005114 ORTHO05D006301 4.9e-32 141.7 153 52.3
COL.COLO4_34318 Corchorus olitorius HOM05D005114 ORTHO05D006301 1.4e-31 140.2 148 53.4
TAR628G1615 Trochodendron aralioides HOM05D005114 ORTHO05D006301 5.5e-31 138.3 148 54.1
CiPaw.05G093800 Carya illinoinensis HOM05D005114 ORTHO05D006301 9.3e-31 137.5 143 55.2
Gohir.A03G170500 Gossypium hirsutum HOM05D005114 ORTHO05D006301 1.6e-30 136.7 155 49.7
Gorai.005G216400 Gossypium raimondii HOM05D005114 ORTHO05D006301 1.6e-30 136.7 155 49.7
Thecc.02G147000 Theobroma cacao HOM05D005114 ORTHO05D006301 2.7e-30 136.0 148 52.0
Gohir.D02G193600 Gossypium hirsutum HOM05D005114 ORTHO05D006301 1.0e-29 134.0 155 49.0
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 1.3e-29 133.7 144 53.5
Rhsim05G0044800 Rhododendron simsii HOM05D005114 ORTHO05D006301 2.3e-29 132.9 144 52.1
Cfa005386 Carpinus fangiana HOM05D005114 ORTHO05D006301 3.0e-29 132.5 147 54.4
Haze_01976 Corylus avellana HOM05D005114 ORTHO05D006301 3.0e-29 132.5 147 53.7
Manes.15G113200 Manihot esculenta HOM05D005114 ORTHO05D006301 8.7e-29 131.0 145 52.4
Gohir.D12G013600 Gossypium hirsutum HOM05D005114 ORTHO05D006301 1.1e-28 130.6 148 52.0
Gorai.008G013600 Gossypium raimondii HOM05D005114 ORTHO05D006301 1.3e-27 127.1 148 51.4
SalBow5G2991 Salvia bowleyana HOM05D005114 ORTHO05D006301 1.3e-27 127.1 151 49.7
SalBow5G4655 Salvia bowleyana HOM05D005114 ORTHO05D006301 1.3e-27 127.1 151 49.7
TAR381G0701 Trochodendron aralioides HOM05D005114 ORTHO05D006301 1.6e-27 126.7 165 47.9
QL11p056532 Quercus lobata HOM05D005114 ORTHO05D006301 8.2e-27 124.4 164 49.4
Duzib052G0751 Durio zibethinus HOM05D005114 ORTHO05D006301 1.4e-26 123.6 149 49.0
Lsat_1_v5_gn_4_127800 Lactuca sativa HOM05D005114 ORTHO05D006301 5.3e-26 121.7 157 43.9
Potri.004G207500 Populus trichocarpa HOM05D005114 ORTHO05D006301 5.3e-26 121.7 144 50.7
Sabra04G0139700 Salix brachista HOM05D005114 ORTHO05D006301 6.9e-26 121.3 144 53.5
Atru.chr5.3568 Acer truncatum HOM05D005114 ORTHO05D006301 1.2e-25 120.6 142 47.9
Potri.009G168800 Populus trichocarpa HOM05D005114 ORTHO05D006301 1.2e-25 120.6 146 50.7
Nitab4.5_0000783g0020 Nicotiana tabacum HOM05D005114 ORTHO05D006301 2.6e-25 119.4 143 49.0
Eucgr.I01537 Eucalyptus grandis HOM05D005114 ORTHO05D006301 5.8e-25 118.2 147 49.0
Cpa.g.sc232.10 Carica papaya HOM05D005114 ORTHO05D006301 1.3e-24 117.1 141 48.2
Aqoxy6G01552 Aquilegia oxysepala HOM05D005114 ORTHO05D006301 1.7e-24 116.7 142 47.2
PGR142G2291 Punica granatum HOM05D005114 ORTHO05D006301 2.2e-24 116.3 155 49.0
MSTRG.27609 Avicennia marina HOM05D005114 ORTHO05D006301 3.8e-24 115.5 146 49.3
Oeu061898.1 Olea europaea HOM05D005114 ORTHO05D006301 5.0e-24 115.2 144 47.2
ClCG02G003320 Citrullus lanatus HOM05D005114 ORTHO05D006301 1.4e-23 113.6 143 48.3
Oeu025012.1 Olea europaea HOM05D005114 ORTHO05D006301 1.4e-23 113.6 144 48.6
Ciclev10029408m.g Citrus clementina HOM05D005114 ORTHO05D006301 2.5e-23 112.8 149 45.6
Sopen01g054350 Solanum pennellii HOM05D005114 ORTHO05D006301 3.2e-23 112.5 153 46.4
Sabra09G0131100 Salix brachista HOM05D005114 ORTHO05D006301 4.2e-23 112.1 144 50.7
Lsat_1_v5_gn_8_120760 Lactuca sativa HOM05D005114 ORTHO05D006301 7.1e-23 111.3 154 41.6
Solyc01g112260.4 Solanum lycopersicum HOM05D005114 ORTHO05D006301 7.1e-23 111.3 153 45.8
CANSAT25G0809 Cannabis sativa HOM05D005114 ORTHO05D006301 2.7e-22 109.4 144 47.9
Duzib132G0223 Durio zibethinus HOM05D005114 ORTHO05D006301 2.7e-22 109.4 112 57.1
TWI31G1388 Tripterygium wilfordii HOM05D005114 ORTHO05D006301 6.1e-22 108.2 148 48.0
MD11G1242200 Malus domestica HOM05D005114 ORTHO05D006301 1.0e-21 107.5 143 48.3
CDE06G2378 Ceratophyllum demersum HOM05D005114 ORTHO05D006301 1.3e-21 107.1 144 42.4
Lsat_1_v5_gn_3_48420 Lactuca sativa HOM05D005114 ORTHO05D006301 3.0e-21 105.9 137 44.5
MD05G1140900 Malus domestica HOM05D005114 ORTHO05D006301 3.9e-21 105.5 142 47.9
FAN27G0013 Fragaria x ananassa HOM05D005114 ORTHO05D006301 6.7e-21 104.8 143 46.9
CDE07G1352 Ceratophyllum demersum HOM05D005114 ORTHO05D006301 8.7e-21 104.4 144 42.4
SGA_v2.0_scaffold98G29308 Striga asiatica HOM05D005114 ORTHO05D006301 1.1e-20 104.0 141 46.1
FvH4_2g16910 Fragaria vesca HOM05D005114 ORTHO05D006301 1.5e-20 103.6 143 46.9
FAN24G2001 Fragaria x ananassa HOM05D008916 ORTHO05D029537 1.5e-20 103.6 143 46.9
Os08g0511400 Oryza sativa ssp. japonica HOM05D005114 ORTHO05D006301 1.5e-20 103.6 148 42.6
RcHm_v2.0_Chr6g0281051 Rosa chinensis HOM05D005114 ORTHO05D006301 4.3e-20 102.1 144 45.8
Lj5P171T50 Lonicera japonica HOM05D005114 ORTHO05D006301 7.4e-20 101.3 80 58.8
Dinv41866 Davidia involucrata HOM05D005114 ORTHO05D006301 1.3e-19 100.5 160 45.0
TWI75G1159 Tripterygium wilfordii HOM05D005114 ORTHO05D006301 2.8e-19 99.4 119 51.3
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 3.7e-19 99.0 129 49.6
EL10Ac9g21545 Beta vulgaris HOM05D005114 ORTHO05D006301 4.8e-19 98.6 149 43.6
PSO210G3276 Papaver somniferum HOM05D005114 ORTHO05D006301 8.2e-19 97.8 142 43.0
unitig_26.g9983 Utricularia gibba HOM05D005114 ORTHO05D006301 8.2e-19 97.8 119 48.7
Sed0004058 Sechium edule HOM05D005114 ORTHO05D006301 1.1e-18 97.4 144 44.4
Ah.01g009940 Amaranthus hybridus HOM05D005114 ORTHO05D006301 1.4e-18 97.1 144 43.8
Ah.01g017650 Amaranthus hybridus HOM05D005114 ORTHO05D006301 1.8e-18 96.7 150 44.0
Sed0025941 Sechium edule HOM05D005114 ORTHO05D006301 1.8e-18 96.7 138 44.9
PSO761G0527 Papaver somniferum HOM05D005114 ORTHO05D006301 2.4e-18 96.3 142 42.3
ClCG02G010460 Citrullus lanatus HOM05D005114 ORTHO05D006301 3.1e-18 95.9 139 43.9
FAN15G0896 Fragaria x ananassa HOM05D005114 ORTHO05D006301 5.3e-18 95.1 139 44.6
Nn6g31654 Nelumbo nucifera HOM05D005114 ORTHO05D006301 1.5e-17 93.6 100 54.0
CsaV3_6G010060 Cucumis sativus L. HOM05D005114 ORTHO05D006301 2.0e-17 93.2 139 43.2
unitig_749.g13979 Utricularia gibba HOM05D005114 ORTHO05D006301 2.0e-17 93.2 119 46.2
Glyma.02G311900 Glycine max HOM05D005114 ORTHO05D006301 3.4e-17 92.4 152 43.4
unitig_0.g2368 Utricularia gibba HOM05D005114 ORTHO05D006301 4.5e-17 92.0 134 45.5
MELO3C013487.2 Cucumis melo HOM05D005114 ORTHO05D006301 5.9e-17 91.7 139 42.4
DCAR_006992 Daucus carota HOM05D005114 ORTHO05D006301 7.7e-17 91.3 120 45.0
MELO3C015705.2 Cucumis melo HOM05D005114 ORTHO05D006301 1.3e-16 90.5 133 45.1
Phvul.008G292700 Phaseolus vulgaris HOM05D005114 ORTHO05D006301 1.3e-16 90.5 138 42.0
CAN.G1645.5 Capsicum annuum HOM05D005114 ORTHO05D006301 1.7e-16 90.1 89 50.6
HPP92_018957 Vanilla planifolia HOM05D005114 ORTHO05D006301 2.9e-16 89.4 121 46.3
Zm00001eb252690 Zea mays HOM05D005114 ORTHO05D006301 5.0e-16 88.6 145 39.3
Glyma.14G000700 Glycine max HOM05D005114 ORTHO05D006301 6.5e-16 88.2 106 50.0
VMungo0647G0598 Vigna mungo HOM05D005114 ORTHO05D006301 6.5e-16 88.2 129 43.4
Os02g0715300 Oryza sativa ssp. japonica HOM05D005114 ORTHO05D006301 8.5e-16 87.8 110 45.5
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 1.1e-15 87.4 75 60.0
HanXRQChr15g0479801 Helianthus annuus HOM05D005114 ORTHO05D006301 4.2e-15 85.5 114 43.0
LjContig00081g0003123 Lotus japonicus HOM05D005114 ORTHO05D006301 7.2e-15 84.7 137 41.6
Eucgr.H04995 Eucalyptus grandis HOM05D005114 ORTHO05D006301 1.6e-14 83.6 138 42.0
HanXRQChr16g0528291 Helianthus annuus HOM05D005114 ORTHO05D006301 2.1e-14 83.2 114 42.1
CiPaw.06G114800 Carya illinoinensis HOM05D005114 ORTHO05D006301 3.6e-14 82.4 102 49.0
ATR0605G119 Amborella trichopoda HOM05D005114 ORTHO05D006301 1.8e-13 80.1 149 41.6
PSO541G2758 Papaver somniferum HOM05D005114 ORTHO05D006301 2.3e-13 79.7 131 38.9
PSO675G3082 Papaver somniferum HOM05D005114 ORTHO05D006301 6.7e-13 78.2 131 39.7
MBI04_g33967_MAGBIO Magnolia biondii HOM05D005114 ORTHO05D006301 8.8e-13 77.8 130 43.8
HPP92_019672 Vanilla planifolia HOM05D005114 ORTHO05D006301 1.1e-12 77.4 152 37.5
HanXRQChr14g0449881 Helianthus annuus HOM05D005114 ORTHO05D006301 5.7e-12 75.1 123 39.0
Lalb_Chr10g0107691 Lupinus albus HOM05D005114 ORTHO05D006301 1.7e-11 73.6 138 36.2
Medtr5g099250 Medicago truncatula HOM05D005114 ORTHO05D006301 1.7e-11 73.6 139 37.4
PGR042G3856 Punica granatum HOM05D005114 ORTHO05D006301 6.3e-11 71.6 137 37.2
Gohir.A12G012850 Gossypium hirsutum HOM05D005114 ORTHO05D006301 1.8e-10 70.1 71 54.9
AL7G15830 Arabidopsis lyrata HOM05D005114 ORTHO05D006301 3.1e-10 69.3 107 40.2
AT4G35320 Arabidopsis thaliana HOM05D005114 ORTHO05D006301 3.1e-10 69.3 107 40.2
THA.LOC104819696 Tarenaya hassleriana HOM05D005114 ORTHO05D006301 3.1e-10 69.3 109 42.2
AUR62013183 Chenopodium quinoa HOM05D005114 ORTHO05D006301 4.1e-10 68.9 64 50.0
CsaV3_7G002020 Cucumis sativus L. HOM05D005114 ORTHO05D006301 5.3e-10 68.6 135 40.0
Sp7g33120 Schrenkiella parvula HOM05D005114 ORTHO05D006301 5.3e-10 68.6 107 40.2
TPR.G18628 Trifolium pratense HOM05D005114 ORTHO05D006301 6.9e-10 68.2 58 55.2
BcaNung00605 Brassica carinata HOM05D005114 ORTHO05D006301 9.1e-10 67.8 112 37.5
C01p03580 Brassica napus HOM05D005114 ORTHO05D006301 9.1e-10 67.8 112 37.5
Carub.0007s0497 Capsella rubella HOM05D005114 ORTHO05D006301 9.1e-10 67.8 107 41.1
Aa31LG2G14950 Aethionema arabicum HOM05D005114 ORTHO05D006301 1.5e-09 67.0 116 37.9
CARHR243650 Cardamine hirsuta HOM05D005114 ORTHO05D006301 1.5e-09 67.0 111 39.6
THA.LOC104807409 Tarenaya hassleriana HOM05D005114 ORTHO05D006301 1.5e-09 67.0 109 43.1
Thhalv10026488m.g Eutrema salsugineum HOM05D005114 ORTHO05D006301 2.0e-09 66.6 108 38.0
Sc08g0002110 Simmondsia chinensis HOM05D005114 ORTHO05D006301 2.0e-09 66.6 95 42.1
BraA01t00308Z Brassica rapa HOM05D005114 ORTHO05D006301 5.9e-09 65.1 112 38.4
Ca_06504_v3 Cicer arietinum L. HOM05D005114 ORTHO05D006301 1.0e-08 64.3 157 33.1
A01p03230 Brassica napus HOM05D005114 ORTHO05D006301 1.3e-08 63.9 112 37.5
BolC1t00348H Brassica oleracea HOM05D005114 ORTHO05D006301 1.3e-08 63.9 112 37.5
Dinv13785 Davidia involucrata HOM05D005114 ORTHO05D006301 5.0e-08 62.0 58 58.6
Zm00001eb188970 Zea mays HOM05D005114 ORTHO05D006301 6.5e-08 61.6 110 39.1
SEGI_30505 Sequoiadendron giganteum HOM05D005114 ORTHO05D006301 8.5e-08 61.2 78 41.0
Dinv11287 Davidia involucrata HOM05D005114 ORTHO05D006301 1.1e-07 60.8 58 58.6
Zm00001eb035190 Zea mays HOM05D005114 ORTHO05D006301 1.1e-07 60.8 132 33.3
Lju1609C0T0 Lonicera japonica HOM05D005114 ORTHO05D006301 1.9e-07 60.1 38 63.2


User provided reference genes

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