Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 5.9e-61 237.3 113 100.0
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.2e-48 196.4 113 85.0
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 1.3e-39 166.4 113 72.6
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 4.8e-39 164.5 113 71.7
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 5.4e-38 161.0 112 70.5
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 1.6e-37 159.5 113 68.1
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 7.7e-37 157.1 113 67.3
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 2.2e-36 155.6 114 68.4
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 2.2e-36 155.6 113 68.1
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 3.8e-36 154.8 108 69.4
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 1.9e-35 152.5 126 63.5
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 2.5e-35 152.1 113 64.6
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 2.5e-35 152.1 113 65.5
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 2.5e-35 152.1 113 65.5
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 3.2e-35 151.8 112 62.5
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 5.5e-35 151.0 112 63.4
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 1.6e-34 149.4 112 63.4
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 1.6e-34 149.4 101 68.3
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 6.1e-34 147.5 111 64.9
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 8.0e-34 147.1 114 63.2
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 1.0e-33 146.7 113 63.7
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 1.4e-33 146.4 120 58.3
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 1.8e-33 146.0 113 63.7
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.8e-33 146.0 110 66.4
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 5.2e-33 144.4 112 59.8
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 6.8e-33 144.1 107 64.5
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 8.8e-33 143.7 113 61.9
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 1.5e-32 142.9 113 61.9
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 1.5e-32 142.9 113 60.2
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 2.0e-32 142.5 114 60.5
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 2.0e-32 142.5 120 60.0
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 2.0e-32 142.5 115 60.9
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 2.6e-32 142.1 113 61.1
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 2.6e-32 142.1 110 64.5
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 4.4e-32 141.4 115 59.1
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 1.7e-31 139.4 110 59.1
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 2.8e-31 138.7 79 77.2
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 2.8e-31 138.7 110 62.7
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 3.7e-31 138.3 109 61.5
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 4.9e-31 137.9 113 61.1
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 4.9e-31 137.9 114 59.6
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 4.9e-31 137.9 114 59.6
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 6.3e-31 137.5 79 79.7
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 8.3e-31 137.1 76 80.3
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 8.3e-31 137.1 110 63.6
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 1.1e-30 136.7 113 55.8
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.1e-30 136.7 76 78.9
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 4.1e-30 134.8 99 65.7
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 9.2e-30 133.7 112 58.9
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 1.2e-29 133.3 114 59.6
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 5.9e-29 131.0 73 79.5
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 7.8e-29 130.6 102 59.8
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 7.8e-29 130.6 109 58.7
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 1.3e-28 129.8 103 59.2
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 2.9e-28 128.6 108 57.4
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.9e-28 128.6 108 55.6
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 3.8e-28 128.3 114 57.0
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 5.0e-28 127.9 78 71.8
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 6.6e-28 127.5 73 82.2
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 8.6e-28 127.1 109 56.9
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 8.6e-28 127.1 109 56.9
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 8.6e-28 127.1 110 58.2
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 1.1e-27 126.7 110 52.7
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 1.1e-27 126.7 101 59.4
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 1.1e-27 126.7 110 56.4
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 3.3e-27 125.2 112 55.4
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 5.6e-27 124.4 80 68.8
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 5.6e-27 124.4 109 56.9
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 5.6e-27 124.4 115 52.2
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 7.3e-27 124.0 107 54.2
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 9.5e-27 123.6 76 72.4
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.2e-26 123.2 109 57.8
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.6e-26 122.9 79 67.1
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 1.6e-26 122.9 110 53.6
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.1e-26 122.5 79 67.1
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 6.1e-26 120.9 109 55.0
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 6.1e-26 120.9 111 55.0
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 8.0e-26 120.6 109 55.0
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 1.0e-25 120.2 115 53.9
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.0e-25 120.2 115 51.3
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 1.8e-25 119.4 78 67.9
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 3.0e-25 118.6 108 50.9
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 3.0e-25 118.6 115 53.0
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 5.2e-25 117.9 71 70.4
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 6.8e-25 117.5 109 55.0
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 8.9e-25 117.1 112 51.8
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 8.9e-25 117.1 107 55.1
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 2.0e-24 115.9 107 49.5
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 2.0e-24 115.9 107 49.5
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 3.4e-24 115.2 78 64.1
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 4.4e-24 114.8 112 49.1
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 5.7e-24 114.4 77 72.7
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 7.5e-24 114.0 112 50.0
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 1.3e-23 113.2 125 48.0
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 1.7e-23 112.8 112 48.2
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 2.9e-23 112.1 120 49.2
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.9e-23 112.1 109 52.3
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 4.9e-23 111.3 112 51.8
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 4.9e-23 111.3 73 67.1
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 6.4e-23 110.9 122 47.5
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 6.4e-23 110.9 122 47.5
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 1.1e-22 110.2 112 49.1
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 1.1e-22 110.2 107 46.7
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 3.2e-22 108.6 112 46.4
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 4.1e-22 108.2 127 43.3
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 5.4e-22 107.8 112 46.4
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 5.4e-22 107.8 112 48.2
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.6e-21 106.3 105 51.4
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 5.9e-21 104.4 118 47.5
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 7.8e-21 104.0 97 47.4
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 2.3e-20 102.4 122 44.3
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 3.0e-20 102.1 104 48.1
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 2.5e-19 99.0 107 44.9
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 7.3e-19 97.4 74 62.2
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 9.5e-19 97.1 98 44.9
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 8.0e-18 94.0 77 55.8
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 2.3e-17 92.4 96 42.7
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 4.1e-14 81.6 76 51.3
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 1.2e-13 80.1 122 39.3
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 1.6e-13 79.7 61 60.7
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 5.0e-12 74.7 40 77.5
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 6.6e-12 74.3 40 80.0
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 1.1e-11 73.6 51 60.8
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 3.1e-09 65.5 85 43.5
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 5.8e-08 61.2 111 27.9
CDE11G0759 Ceratophyllum demersum HOM05D006227 ORTHO05D129109 9.9e-08 60.5 52 53.8
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 3.7e-07 58.5 57 47.4
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 8.3e-07 57.4 79 32.9
RcHm_v2.0_Chr4g0411551 Rosa chinensis HOM05D000001 ORTHO05D000003 1.1e-06 57.0 73 42.5


User provided reference genes

Program Settings