Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049346 Camellia sinensis var. sinensis HOM05D003030 ORTHO05D111095 7.7e-59 230.7 159 100.0
Actinidia11570 Actinidia chinensis HOM05D003030 ORTHO05D003610 1.3e-08 63.9 33 90.9
CSS0037459 Camellia sinensis var. sinensis HOM05D003030 ORTHO05D003610 1.3e-08 63.9 33 90.9
COL.COLO4_03383 Corchorus olitorius HOM05D003030 ORTHO05D003610 1.3e-08 63.9 33 90.9
Dinv16900 Davidia involucrata HOM05D003030 ORTHO05D003610 1.3e-08 63.9 33 90.9
Eucgr.K02971 Eucalyptus grandis HOM05D003030 ORTHO05D003610 1.3e-08 63.9 33 90.9
Eucgr.L01140 Eucalyptus grandis HOM05D003030 ORTHO05D003610 1.3e-08 63.9 33 90.9
Sc07g0006730 Simmondsia chinensis HOM05D003030 ORTHO05D003610 1.3e-08 63.9 35 88.6
Thecc.05G012400 Theobroma cacao HOM05D003030 ORTHO05D003610 1.3e-08 63.9 33 90.9
Lalb_Chr01g0023171 Lupinus albus HOM05D003030 ORTHO05D003610 1.6e-08 63.5 33 90.9
Lalb_Chr03g0043361 Lupinus albus HOM05D003030 ORTHO05D003610 1.6e-08 63.5 33 90.9
PGR004G1298 Punica granatum HOM05D003030 ORTHO05D003610 1.6e-08 63.5 33 90.9
CiPaw.09G211500 Carya illinoinensis HOM05D003030 ORTHO05D003610 2.8e-08 62.8 33 87.9
ClCG10G022300 Citrullus lanatus HOM05D003030 ORTHO05D003610 2.8e-08 62.8 33 87.9
Glyma.07G152700 Glycine max HOM05D003030 ORTHO05D003610 2.8e-08 62.8 33 87.9
Phvul.008G095900 Phaseolus vulgaris HOM05D003030 ORTHO05D003610 2.8e-08 62.8 33 87.9
VMungo1383G1990 Vigna mungo HOM05D003030 ORTHO05D003610 2.8e-08 62.8 33 87.9
Atru.chr11.573 Acer truncatum HOM05D003030 ORTHO05D003610 3.6e-08 62.4 33 87.9
Atru.chr8.2276 Acer truncatum HOM05D003030 ORTHO05D003610 3.6e-08 62.4 33 87.9
Cfa017177 Carpinus fangiana HOM05D003030 ORTHO05D003610 3.6e-08 62.4 33 87.9
Gohir.A09G166400 Gossypium hirsutum HOM05D003030 ORTHO05D003610 3.6e-08 62.4 33 87.9
Lj2C71G10 Lonicera japonica HOM05D003030 ORTHO05D003610 3.6e-08 62.4 33 84.8
Lalb_Chr19g0124391 Lupinus albus HOM05D003030 ORTHO05D003610 4.8e-08 62.0 33 87.9
SalBow5G1849 Salvia bowleyana HOM05D003030 ORTHO05D003610 4.8e-08 62.0 33 87.9
RcHm_v2.0_Chr3g0462561 Rosa chinensis HOM05D003030 ORTHO05D003610 6.2e-08 61.6 33 87.9
arahy.Tifrunner.gnm1.ann1.MTX888 Arachis hypogaea HOM05D003030 ORTHO05D003610 8.1e-08 61.2 33 84.8
arahy.Tifrunner.gnm1.ann1.S2MXQV Arachis hypogaea HOM05D003030 ORTHO05D003610 8.1e-08 61.2 33 84.8
MSTRG.18993 Avicennia marina HOM05D003030 ORTHO05D003610 8.1e-08 61.2 33 87.9
Hma1.2p1_0362F.1_g136510 Hydrangea macrophylla HOM05D003030 ORTHO05D003610 8.1e-08 61.2 33 87.9
PGR004G1748 Punica granatum HOM05D003030 ORTHO05D003610 8.1e-08 61.2 33 87.9
Sabra06G0078500 Salix brachista HOM05D003030 ORTHO05D003610 8.1e-08 61.2 33 84.8
TWI74G1204 Tripterygium wilfordii HOM05D003030 ORTHO05D003610 8.1e-08 61.2 33 87.9
vmacro20298 Vaccinium macrocarpon HOM05D003030 ORTHO05D003610 8.1e-08 61.2 33 84.8
VMungo1383G1106 Vigna mungo HOM05D003030 ORTHO05D003610 8.1e-08 61.2 33 84.8
Ah.12g058860 Amaranthus hybridus HOM05D003030 ORTHO05D003610 1.1e-07 60.8 33 87.9
Glyma.18G203800 Glycine max HOM05D003030 ORTHO05D003610 1.1e-07 60.8 32 87.5
Gohir.D09G162000 Gossypium hirsutum HOM05D003030 ORTHO05D003610 1.1e-07 60.8 33 84.8
Phvul.008G095800 Phaseolus vulgaris HOM05D003030 ORTHO05D003610 1.1e-07 60.8 33 84.8
MSTRG.5563 Avicennia marina HOM05D003030 ORTHO05D003610 1.4e-07 60.5 33 87.9
Oeu042664.1 Olea europaea HOM05D003030 ORTHO05D003610 1.4e-07 60.5 33 84.8
TPR.G9215 Trifolium pratense HOM05D003030 ORTHO05D003610 1.4e-07 60.5 33 84.8
Oeu063394.1 Olea europaea HOM05D003030 ORTHO05D003610 1.8e-07 60.1 33 84.8
Duzib106G1809 Durio zibethinus HOM05D003030 ORTHO05D003610 2.4e-07 59.7 32 84.4
Rhsim05G0217500 Rhododendron simsii HOM05D003030 ORTHO05D003610 3.1e-07 59.3 32 84.4
Ca_04021_v3 Cicer arietinum L. HOM05D003030 ORTHO05D003610 4.0e-07 58.9 33 84.8
CSS0029522 Camellia sinensis var. sinensis HOM05D003030 ORTHO05D003610 5.3e-07 58.5 30 90.0
Gorai.002G262700 Gossypium raimondii HOM05D003030 ORTHO05D003610 5.3e-07 58.5 30 90.0
QL07p035029 Quercus lobata HOM05D003030 ORTHO05D003610 5.3e-07 58.5 30 90.0
Cpa.g.sc120.60 Carica papaya HOM05D003030 ORTHO05D003610 6.9e-07 58.2 30 90.0
CDE12G0536 Ceratophyllum demersum HOM05D003030 ORTHO05D003610 6.9e-07 58.2 33 78.8
DCAR_028864 Daucus carota HOM05D003030 ORTHO05D003610 6.9e-07 58.2 50 64.0
Duzib093G1068 Durio zibethinus HOM05D003030 ORTHO05D003610 6.9e-07 58.2 33 81.8
AagrBONN_evm.TU.Sc2ySwM_117.1172 Anthoceros agrestis HOM05D003030 ORTHO05D003610 9.0e-07 57.8 33 81.8
Ciclev10011909m.g Citrus clementina HOM05D003030 ORTHO05D003610 9.0e-07 57.8 33 81.8
Lsat_1_v5_gn_9_35001 Lactuca sativa HOM05D003030 ORTHO05D003610 9.0e-07 57.8 33 81.8
Hund10981 Selenicereus undatus HOM05D003030 ORTHO05D003610 9.0e-07 57.8 33 81.8
GSVIVG01003934001 Vitis vinifera HOM05D003030 ORTHO05D003610 1.2e-06 57.4 30 90.0
CSS0020092 Camellia sinensis var. sinensis HOM05D003030 ORTHO05D003610 1.5e-06 57.0 30 86.7
CSS0038480 Camellia sinensis var. sinensis HOM05D003030 ORTHO05D003610 1.5e-06 57.0 30 86.7
Nn2g13177 Nelumbo nucifera HOM05D003030 ORTHO05D003610 1.5e-06 57.0 34 85.3
THA.LOC104823376 Tarenaya hassleriana HOM05D003030 ORTHO05D003610 1.5e-06 57.0 34 85.3
CiPaw.10G158000 Carya illinoinensis HOM05D003030 ORTHO05D003610 2.0e-06 56.6 30 86.7
Duzib128G0937 Durio zibethinus HOM05D003030 ORTHO05D003610 2.0e-06 56.6 29 89.7
Eucgr.L01138 Eucalyptus grandis HOM05D003030 ORTHO05D003610 2.0e-06 56.6 29 89.7
FvH4_6g11120 Fragaria vesca HOM05D003030 ORTHO05D003610 2.0e-06 56.6 33 81.8
FAN02G0092 Fragaria x ananassa HOM05D003030 ORTHO05D003610 2.0e-06 56.6 33 81.8
FAN05G1407 Fragaria x ananassa HOM05D003030 ORTHO05D003610 2.0e-06 56.6 33 81.8
FAN09G4535 Fragaria x ananassa HOM05D003030 ORTHO05D003610 2.0e-06 56.6 33 81.8
FAN14G0463 Fragaria x ananassa HOM05D003030 ORTHO05D003610 2.0e-06 56.6 33 81.8
Ah.02g115580 Amaranthus hybridus HOM05D003030 ORTHO05D003610 2.6e-06 56.2 29 89.7
ECA236G1375 Erigeron canadensis HOM05D003030 ORTHO05D003610 2.6e-06 56.2 33 78.8
Glyma.01G119400 Glycine max HOM05D003030 ORTHO05D003610 2.6e-06 56.2 26 96.2
Glyma.03G055500 Glycine max HOM05D003030 ORTHO05D003610 2.6e-06 56.2 26 96.2
Gohir.D01G216210 Gossypium hirsutum HOM05D003030 ORTHO05D003610 2.6e-06 56.2 30 86.7
Medtr7g069390 Medicago truncatula HOM05D003030 ORTHO05D003610 2.6e-06 56.2 26 96.2
Psat3g126040 Pisum sativum HOM05D003030 ORTHO05D003610 2.6e-06 56.2 26 96.2
Potri.016G119700 Populus trichocarpa HOM05D003030 ORTHO05D003610 2.6e-06 56.2 26 96.2
TPR.G35448 Trifolium pratense HOM05D003030 ORTHO05D003610 2.6e-06 56.2 26 96.2
Migut.L02031 Erythranthe guttata HOM05D003030 ORTHO05D003610 3.4e-06 55.8 26 96.2
Dinv09637 Davidia involucrata HOM05D003030 ORTHO05D003610 4.5e-06 55.5 34 82.4
Gohir.D01G216400 Gossypium hirsutum HOM05D003030 ORTHO05D003610 4.5e-06 55.5 30 86.7
GSVIVG01024707001 Vitis vinifera HOM05D003030 ORTHO05D003610 4.5e-06 55.5 34 82.4
EL10Ac5g12534 Beta vulgaris HOM05D003030 ORTHO05D003610 5.8e-06 55.1 29 86.2
SalBow4G0748 Salvia bowleyana HOM05D003030 ORTHO05D003610 5.8e-06 55.1 29 86.2
AUR62010443 Chenopodium quinoa HOM05D003030 ORTHO05D003610 7.6e-06 54.7 26 92.3
Potri.006G102200 Populus trichocarpa HOM05D003030 ORTHO05D003610 7.6e-06 54.7 26 92.3
Actinidia05355 Actinidia chinensis HOM05D003030 ORTHO05D003610 9.9e-06 54.3 29 86.2
MELO3C026003.2 Cucumis melo HOM05D003030 ORTHO05D003610 9.9e-06 54.3 26 92.3
Lj3C949G7 Lonicera japonica HOM05D003030 ORTHO05D003610 9.9e-06 54.3 29 86.2
Lj3g0005923 Lotus japonicus HOM05D003030 ORTHO05D003610 9.9e-06 54.3 26 92.3
Manes.09G106700 Manihot esculenta HOM05D003030 ORTHO05D003610 9.9e-06 54.3 29 86.2


User provided reference genes

Program Settings