Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 6.7e-291 1003.4 561 100.0
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 2.6e-250 868.6 549 91.8
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 1.1e-110 404.8 546 49.6
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 4.3e-104 382.9 600 47.5
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 9.6e-104 381.7 568 45.8
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 7.4e-80 302.4 542 44.8
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 4.2e-75 286.6 541 41.2
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 1.3e-63 248.4 533 38.6
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 2.0e-61 241.1 531 37.5
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 3.6e-58 230.3 512 39.6
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 4.8e-55 219.9 203 61.6
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 2.4e-54 217.6 556 36.2
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 2.6e-53 214.2 512 37.5
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 1.0e-52 212.2 204 58.8
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 8.5e-52 209.1 207 57.5
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 1.5e-51 208.4 190 63.2
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 2.7e-50 204.1 192 59.4
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 2.7e-50 204.1 406 40.9
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 1.0e-49 202.2 256 51.2
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 4.0e-49 200.3 187 62.0
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 5.2e-49 199.9 187 62.0
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 8.8e-49 199.1 228 53.9
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 8.8e-49 199.1 187 61.5
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 1.2e-48 198.7 380 41.3
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 1.7e-47 194.9 244 50.0
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 1.7e-47 194.9 292 43.8
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 1.8e-46 191.4 410 40.0
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 3.1e-46 190.7 232 50.9
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 3.1e-46 190.7 234 50.9
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 3.1e-46 190.7 218 51.8
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 7.0e-46 189.5 197 55.8
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 9.1e-46 189.1 181 58.6
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 3.5e-45 187.2 376 38.6
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 3.5e-45 187.2 194 56.7
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 1.3e-44 185.3 404 38.9
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 8.5e-44 182.6 167 59.3
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 1.1e-43 182.2 184 56.5
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 1.5e-43 181.8 167 59.3
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.9e-43 181.4 472 36.7
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 2.5e-43 181.0 220 50.9
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 5.5e-43 179.9 461 36.4
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 7.2e-43 179.5 472 36.4
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 9.4e-43 179.1 472 36.9
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 1.2e-42 178.7 229 47.2
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 3.6e-42 177.2 324 40.1
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 6.1e-42 176.4 203 53.2
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 8.0e-42 176.0 141 64.5
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 1.0e-41 175.6 192 53.1
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 5.2e-41 173.3 225 49.3
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 5.2e-41 173.3 256 46.9
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 1.5e-40 171.8 494 34.6
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 1.5e-40 171.8 253 46.2
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 3.4e-40 170.6 313 44.7
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 4.4e-40 170.2 104 81.7
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 4.4e-40 170.2 202 53.0
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 1.3e-39 168.7 95 83.2
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 2.8e-39 167.5 286 42.0
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 2.8e-39 167.5 224 50.4
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 8.3e-39 166.0 145 64.8
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 1.1e-38 165.6 213 46.9
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 1.1e-38 165.6 139 64.0
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 1.8e-38 164.9 111 71.2
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 1.8e-38 164.9 235 46.4
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 2.4e-38 164.5 322 38.8
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 4.1e-38 163.7 461 32.5
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 7.0e-38 162.9 278 41.0
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 7.0e-38 162.9 112 73.2
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 9.1e-38 162.5 108 75.9
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 1.2e-37 162.2 139 63.3
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 1.2e-37 162.2 121 71.1
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 1.6e-37 161.8 418 35.2
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 2.0e-37 161.4 91 84.6
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 2.0e-37 161.4 456 32.5
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 4.5e-37 160.2 198 51.0
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 5.9e-37 159.8 116 69.8
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 1.7e-36 158.3 87 85.1
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 6.5e-36 156.4 220 48.6
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 8.6e-36 156.0 114 69.3
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 1.5e-35 155.2 149 57.0
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 2.5e-35 154.5 481 31.8
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 4.2e-35 153.7 168 55.4
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 5.5e-35 153.3 104 72.1
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 7.2e-35 152.9 114 67.5
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 1.2e-34 152.1 197 47.7
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.6e-34 151.8 233 46.4
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 8.0e-34 149.4 116 66.4
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 1.4e-33 148.7 173 53.8
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 1.4e-33 148.7 382 33.5
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 1.8e-33 148.3 196 46.4
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 1.8e-33 148.3 341 37.5
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 3.0e-33 147.5 116 63.8
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 2.6e-32 144.4 111 64.9
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 3.4e-32 144.1 227 43.6
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 3.4e-32 144.1 141 56.0
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 5.7e-32 143.3 321 35.5
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 5.7e-32 143.3 286 40.9
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 3.7e-31 140.6 124 61.3
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 3.7e-31 140.6 124 61.3
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 3.7e-31 140.6 124 61.3
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 4.9e-31 140.2 185 48.1
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 4.9e-31 140.2 170 49.4
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 1.1e-30 139.0 117 65.0
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 7.0e-30 136.3 116 60.3
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 7.0e-30 136.3 116 60.3
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 7.0e-30 136.3 116 60.3
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 1.2e-29 135.6 116 63.8
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 1.2e-29 135.6 116 63.8
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 2.0e-29 134.8 137 54.7
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 3.8e-28 130.6 136 55.9
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 3.8e-28 130.6 136 55.9
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 4.3e-27 127.1 151 51.7
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 6.1e-26 123.2 148 48.0
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 1.4e-25 122.1 106 56.6
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 1.5e-24 118.6 205 40.5
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 2.2e-23 114.8 101 62.4
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 3.2e-22 110.9 90 65.6
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 4.1e-22 110.5 76 69.7
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 9.2e-22 109.4 403 34.5
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 1.6e-21 108.6 100 63.0
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 1.6e-21 108.6 90 62.2
CiPaw.08G031700 Carya illinoinensis HOM05D005890 ORTHO05D006717 3.9e-20 104.0 471 34.0
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 5.0e-20 103.6 473 31.1
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 4.3e-19 100.5 60 78.3
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 1.1e-17 95.9 476 27.3
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 1.6e-13 82.0 221 34.4
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 1.7e-12 78.6 416 29.8
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 1.1e-11 75.9 93 52.7
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 7.3e-11 73.2 54 66.7
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 1.8e-09 68.6 79 55.7
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 1.3e-07 62.4 34 79.4
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 1.3e-07 62.4 34 79.4
DCAR_001127 Daucus carota HOM05D000703 ORTHO05D006717 1.3e-07 62.4 32 87.5


User provided reference genes

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