Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 1.1e-119 433.3 224 100.0
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 2.3e-101 372.5 224 88.4
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 1.2e-100 370.2 224 84.8
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 1.4e-98 363.2 243 77.4
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 2.7e-97 359.0 223 79.8
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 1.7e-96 356.3 224 78.6
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 2.9e-96 355.5 224 81.2
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 8.5e-96 354.0 224 78.1
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 8.5e-96 354.0 224 80.4
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 1.5e-95 353.2 224 79.5
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 1.6e-94 349.7 218 80.7
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 1.6e-94 349.7 224 79.0
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 2.1e-94 349.4 224 79.0
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 3.6e-94 348.6 224 78.6
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 4.7e-94 348.2 224 77.7
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 1.4e-93 346.7 224 77.7
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 3.0e-93 345.5 224 77.2
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 3.0e-93 345.5 207 83.6
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 1.2e-92 343.6 218 79.8
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 1.5e-92 343.2 224 77.7
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 2.0e-92 342.8 222 77.5
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 3.4e-92 342.0 224 77.7
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 5.7e-92 341.3 222 77.5
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 7.5e-92 340.9 224 76.8
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 1.3e-91 340.1 218 79.4
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 1.3e-91 340.1 224 78.1
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 1.7e-91 339.7 224 78.1
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 1.7e-91 339.7 224 78.6
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 2.2e-91 339.3 220 77.7
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 3.7e-91 338.6 224 76.3
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 3.7e-91 338.6 230 76.1
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 6.3e-91 337.8 224 76.8
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 1.1e-90 337.0 207 81.6
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 1.8e-90 336.3 224 75.9
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 2.4e-90 335.9 225 76.4
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 4.1e-90 335.1 221 76.9
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 4.1e-90 335.1 224 75.0
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 5.4e-90 334.7 224 75.4
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 7.0e-90 334.3 219 75.8
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 9.2e-90 334.0 223 77.1
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 2.7e-89 332.4 225 75.1
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 3.5e-89 332.0 222 75.2
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 3.5e-89 332.0 222 74.8
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 7.7e-89 330.9 219 78.1
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 1.0e-88 330.5 218 75.2
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 1.0e-88 330.5 216 79.2
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 1.3e-88 330.1 221 75.6
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 1.3e-88 330.1 219 75.8
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 2.9e-88 328.9 218 74.8
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 3.8e-88 328.6 219 75.8
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 3.8e-88 328.6 227 74.0
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 6.6e-88 327.8 222 74.8
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 6.6e-88 327.8 224 75.4
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 1.5e-87 326.6 228 75.0
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 1.5e-87 326.6 218 76.1
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 4.3e-87 325.1 214 75.2
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 7.3e-87 324.3 224 75.0
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 2.8e-86 322.4 220 72.3
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 3.6e-86 322.0 214 75.2
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 1.0e-85 320.5 217 75.1
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 1.0e-85 320.5 217 75.1
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 1.8e-85 319.7 214 75.2
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 2.3e-85 319.3 224 73.7
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 2.3e-85 319.3 249 68.3
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 3.0e-85 318.9 217 74.7
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 2.0e-84 316.2 222 75.2
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 3.4e-84 315.5 217 74.2
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 5.7e-84 314.7 218 73.9
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 9.8e-84 313.9 224 72.3
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 4.9e-83 311.6 200 80.5
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 6.4e-83 311.2 217 73.3
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 6.4e-83 311.2 222 73.9
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 1.6e-81 306.6 224 68.3
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 3.0e-80 302.4 246 67.1
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 3.9e-80 302.0 226 70.8
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 6.6e-80 301.2 221 70.6
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 8.6e-80 300.8 221 70.1
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 4.7e-78 295.0 193 75.1
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 1.0e-77 293.9 195 77.4
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 1.0e-77 293.9 256 64.5
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 1.4e-77 293.5 215 68.4
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 5.2e-77 291.6 215 68.4
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 1.2e-76 290.4 224 70.5
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 1.5e-76 290.0 260 63.1
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 4.4e-76 288.5 207 75.4
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 3.7e-75 285.4 211 71.6
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 7.0e-74 281.2 219 65.8
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 2.0e-73 279.6 220 65.0
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 6.0e-73 278.1 226 65.9
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 6.0e-73 278.1 219 65.3
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 1.3e-72 276.9 248 61.3
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 3.9e-72 275.4 178 75.8
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 1.2e-70 270.4 207 66.7
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 3.1e-69 265.8 221 65.2
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 2.1e-62 243.0 208 64.4
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 1.3e-59 233.8 154 76.6
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 1.7e-59 233.4 217 58.5
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 2.9e-59 232.6 153 75.8
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 8.4e-59 231.1 271 53.1
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 4.1e-58 228.8 208 63.5
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 2.3e-56 223.0 160 70.0
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 3.6e-54 215.7 221 53.4
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 4.4e-52 208.8 120 84.2
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 1.4e-50 203.8 201 60.2
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 1.2e-49 200.7 227 52.0
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 1.3e-46 190.7 143 63.6
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 5.3e-45 185.3 221 49.3
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 1.7e-40 170.2 150 56.7
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 7.4e-39 164.9 223 44.4
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 9.9e-36 154.5 85 85.9
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 8.4e-35 151.4 384 32.6
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 7.1e-34 148.3 115 65.2
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 8.4e-27 124.8 84 67.9
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 5.9e-20 102.1 143 45.5
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 7.6e-20 101.7 70 68.6
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 8.5e-19 98.2 51 92.2
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 1.4e-18 97.4 66 80.3
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 3.2e-18 96.3 66 77.3
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 1.2e-17 94.4 71 69.0
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 3.6e-17 92.8 67 67.2
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 2.3e-16 90.1 67 70.1
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 7.4e-15 85.1 56 80.4
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 6.5e-11 72.0 194 30.9
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.1e-10 71.2 53 69.8
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 4.2e-10 69.3 98 39.8
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.5e-07 60.8 57 57.9
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 2.2e-06 57.0 45 64.4


User provided reference genes

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