Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 4.7e-211 737.6 382 100.0
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.5e-209 732.6 380 99.5
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 2.4e-170 602.4 379 82.8
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 4.4e-169 598.2 433 74.6
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 9.9e-169 597.0 380 81.8
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 2.2e-168 595.9 380 81.3
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 8.4e-168 594.0 380 80.0
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 2.3e-165 585.9 381 79.0
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 1.9e-164 582.8 380 78.7
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 5.6e-164 581.3 380 78.2
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 2.8e-163 578.9 380 78.4
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 1.8e-162 576.2 380 76.6
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 1.8e-162 576.2 380 76.6
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 2.4e-162 575.9 380 77.6
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 5.3e-162 574.7 380 76.6
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 9.0e-162 573.9 379 77.3
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 4.4e-161 571.6 381 78.0
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 3.8e-160 568.5 380 76.1
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 4.9e-160 568.2 380 77.1
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 4.9e-160 568.2 379 76.5
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 1.9e-159 566.2 380 75.8
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 4.2e-159 565.1 380 76.6
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 5.4e-159 564.7 380 74.5
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 1.2e-158 563.5 380 76.3
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 1.6e-158 563.1 364 81.6
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 3.5e-158 562.0 381 76.4
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 4.6e-158 561.6 381 76.6
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 6.0e-158 561.2 380 75.8
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 6.0e-158 561.2 408 71.3
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 6.0e-158 561.2 381 75.6
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 1.3e-157 560.1 380 75.5
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 1.7e-157 559.7 381 76.6
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 1.7e-157 559.7 380 76.3
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 2.3e-157 559.3 380 76.3
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 1.1e-156 557.0 380 76.1
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 3.3e-156 555.4 384 75.8
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 4.3e-156 555.1 390 76.2
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 4.3e-156 555.1 381 74.3
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 7.3e-156 554.3 384 75.3
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 9.6e-156 553.9 380 75.3
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 4.8e-155 551.6 380 74.5
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 4.8e-155 551.6 381 74.3
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 6.2e-155 551.2 381 74.3
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 1.8e-154 549.7 380 73.2
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 1.8e-154 549.7 406 70.7
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 2.4e-154 549.3 404 71.0
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 3.1e-154 548.9 410 70.2
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 6.9e-154 547.7 384 73.2
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 9.0e-154 547.4 400 72.0
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 1.5e-153 546.6 380 73.4
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 3.4e-153 545.4 433 70.0
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 3.4e-153 545.4 380 73.2
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 4.5e-153 545.0 381 73.2
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 9.9e-153 543.9 380 75.3
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 3.8e-152 542.0 381 74.5
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 1.1e-151 540.4 384 74.5
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 1.1e-151 540.4 435 67.6
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 3.2e-151 538.9 380 73.9
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.1e-150 536.2 388 70.4
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 7.9e-150 534.3 385 73.0
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 1.8e-149 533.1 380 71.6
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 2.3e-149 532.7 380 71.1
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 8.7e-149 530.8 380 72.1
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 7.4e-148 527.7 380 70.8
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 1.4e-146 523.5 380 72.4
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.1e-146 522.3 380 70.5
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 3.1e-146 522.3 374 71.4
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 4.0e-146 521.9 380 70.5
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 3.4e-145 518.8 358 76.0
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 4.5e-145 518.5 380 69.7
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 1.0e-144 517.3 380 70.0
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 1.3e-144 516.9 381 70.3
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 1.7e-144 516.5 380 69.7
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 6.5e-144 514.6 379 69.7
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 3.2e-143 512.3 387 69.3
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 2.7e-142 509.2 380 68.4
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 4.6e-142 508.4 387 69.0
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 6.0e-142 508.1 377 69.2
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 1.8e-141 506.5 380 68.4
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 3.0e-141 505.8 380 68.7
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 3.9e-141 505.4 383 68.1
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 1.5e-140 503.4 380 68.4
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.5e-140 502.7 409 65.0
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 4.3e-140 501.9 380 68.4
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 4.3e-140 501.9 382 68.3
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 2.1e-139 499.6 380 67.6
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 4.8e-139 498.4 380 67.6
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 4.8e-139 498.4 380 67.6
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 1.7e-136 490.0 331 76.1
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.9e-136 489.2 380 66.3
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 8.4e-136 487.6 399 64.4
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 8.4e-136 487.6 389 67.4
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 1.0e-133 480.7 460 57.0
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.2e-131 473.0 380 64.7
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 1.4e-130 470.3 384 64.6
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 9.0e-130 467.6 325 72.3
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 2.0e-129 466.5 276 88.0
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 3.4e-129 465.7 385 64.7
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.9e-128 462.6 380 65.3
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 1.2e-121 440.7 383 62.4
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 5.9e-121 438.3 383 62.7
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 2.1e-118 429.9 412 57.5
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 3.2e-111 406.0 392 58.2
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 2.3e-109 399.8 388 56.7
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 5.2e-109 398.7 277 74.7
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 5.2e-77 292.4 245 63.7
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 7.0e-74 282.0 417 42.4
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 5.4e-66 255.8 456 36.0
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 5.8e-60 235.7 158 72.8
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 3.7e-59 233.0 161 71.4
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.4e-58 231.1 158 72.2
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 6.0e-49 199.1 347 39.2
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 7.3e-47 192.2 148 67.6
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.6e-46 191.0 161 61.5
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.6e-44 183.7 137 68.6
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 4.2e-42 176.4 127 72.4
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 1.6e-41 174.5 140 59.3
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 1.1e-37 161.8 109 78.0
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 2.0e-36 157.5 104 74.0
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 7.4e-31 139.0 104 65.4
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 3.8e-27 126.7 95 70.5
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 2.1e-25 120.9 85 71.8
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 1.9e-10 71.2 123 35.8
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 2.5e-10 70.9 165 32.1
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 1.0e-08 65.5 39 79.5
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 2.3e-08 64.3 39 76.9
Cfa026867 Carpinus fangiana HOM05D000892 ORTHO05D005341 8.8e-08 62.4 167 27.5
Lj9A174G23 Lonicera japonica HOM05D002866 ORTHO05D234197 1.5e-07 61.6 116 39.7
Lsat_1_v5_gn_9_20721 Lactuca sativa HOM05D000892 ORTHO05D000750 4.8e-06 56.6 159 28.9
Lj9C161T2 Lonicera japonica HOM05D002866 ORTHO05D234048 6.3e-06 56.2 116 37.9
HanXRQChr08g0229831 Helianthus annuus HOM05D000892 ORTHO05D000750 8.2e-06 55.8 159 28.9
QL01p012113 Quercus lobata HOM05D000892 ORTHO05D000750 8.2e-06 55.8 159 28.9
GSVIVG01032303001 Vitis vinifera HOM05D002866 ORTHO05D440048 8.2e-06 55.8 33 81.8


User provided reference genes

Program Settings