Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049282 Camellia sinensis var. sinensis HOM05D007776 ORTHO05D009812 8.9e-57 223.4 114 100.0
Dinv41753 Davidia involucrata HOM05D000238 ORTHO05D002999 4.7e-26 121.3 105 65.7
TWI59G0674 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 3.3e-19 98.6 112 58.0
Haze_21304 Corylus avellana HOM05D007776 ORTHO05D009812 1.1e-17 93.6 96 56.2
Rhsim12G0006900 Rhododendron simsii HOM05D007776 ORTHO05D009812 1.4e-17 93.2 108 53.7
TWI14G0313 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 3.1e-17 92.0 118 53.4
Prupe.1G555000 Prunus persica HOM05D007776 ORTHO05D009812 5.3e-17 91.3 104 54.8
Cfa012949 Carpinus fangiana HOM05D007776 ORTHO05D009812 9.0e-17 90.5 96 56.2
MD15G1406800 Malus domestica HOM05D007776 ORTHO05D009812 5.8e-16 87.8 112 52.7
Solyc01g087860.2 Solanum lycopersicum HOM05D007776 ORTHO05D009812 3.8e-15 85.1 114 51.8
PGSC0003DMG400006837 Solanum tuberosum HOM05D007776 ORTHO05D009812 3.8e-15 85.1 114 50.0
CANSAT25G0596 Cannabis sativa HOM05D007776 ORTHO05D009812 8.4e-15 84.0 116 49.1
Sopen01g034790 Solanum pennellii HOM05D007776 ORTHO05D009812 1.4e-14 83.2 114 50.9
CiPaw.05G123100 Carya illinoinensis HOM05D007776 ORTHO05D009812 4.2e-14 81.6 103 52.4
CiPaw.07G236300 Carya illinoinensis HOM05D007776 ORTHO05D009812 4.2e-14 81.6 105 51.4
Migut.C01313 Erythranthe guttata HOM05D007776 ORTHO05D009812 4.2e-14 81.6 120 45.8
QL02p026198 Quercus lobata HOM05D007776 ORTHO05D009812 5.4e-14 81.3 101 51.5
PGR042G2621 Punica granatum HOM05D007776 ORTHO05D009812 7.1e-14 80.9 112 47.3
Gohir.A05G287000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 3.5e-13 78.6 109 48.6
RcHm_v2.0_Chr7g0227891 Rosa chinensis HOM05D007776 ORTHO05D009812 3.5e-13 78.6 101 49.5
Gohir.D05G288000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 6.0e-13 77.8 109 46.8
Gorai.009G303100 Gossypium raimondii HOM05D007776 ORTHO05D009812 6.0e-13 77.8 109 46.8
Aa31LG6G8730 Aethionema arabicum HOM05D007776 ORTHO05D009812 1.3e-12 76.6 114 45.6
Ciclev10002690m.g Citrus clementina HOM05D007776 ORTHO05D009812 1.3e-12 76.6 114 49.1
Cc10_g10000 Coffea canephora HOM05D007776 ORTHO05D009812 1.8e-12 76.3 110 45.5
Nn5g27525 Nelumbo nucifera HOM05D007776 ORTHO05D009812 1.8e-12 76.3 133 44.4
HanXRQChr05g0130261 Helianthus annuus HOM05D007776 ORTHO05D009812 2.3e-12 75.9 118 44.1
FAN04G0521 Fragaria x ananassa HOM05D007776 ORTHO05D009812 3.0e-12 75.5 100 50.0
Duzib177G0943 Durio zibethinus HOM05D007776 ORTHO05D009812 5.1e-12 74.7 108 48.1
Duzib116G0238 Durio zibethinus HOM05D007776 ORTHO05D009812 6.7e-12 74.3 106 49.1
FvH4_5g31870 Fragaria vesca HOM05D007776 ORTHO05D009812 6.7e-12 74.3 101 49.5
FAN04G1877 Fragaria x ananassa HOM05D007776 ORTHO05D009812 6.7e-12 74.3 100 49.0
FAN18G1270 Fragaria x ananassa HOM05D007776 ORTHO05D009812 6.7e-12 74.3 101 49.5
Lsat_1_v5_gn_3_48301 Lactuca sativa HOM05D007776 ORTHO05D009812 8.7e-12 73.9 103 45.6
TAR628G0395 Trochodendron aralioides HOM05D007776 ORTHO05D009812 1.1e-11 73.6 114 47.4
Manes.02G198100 Manihot esculenta HOM05D007776 ORTHO05D009812 1.5e-11 73.2 106 49.1
FAN08G2421 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.9e-11 72.8 100 48.0
Potri.013G107300 Populus trichocarpa HOM05D007776 ORTHO05D009812 2.5e-11 72.4 112 46.4
Cpa.g.sc507.3 Carica papaya HOM05D007776 ORTHO05D009812 3.3e-11 72.0 113 48.7
VMungo1080G1686 Vigna mungo HOM05D007776 ORTHO05D009812 3.3e-11 72.0 99 49.5
Sabra19G0091100 Salix brachista HOM05D007776 ORTHO05D009812 9.6e-11 70.5 100 49.0
Thecc.08G190700 Theobroma cacao HOM05D007776 ORTHO05D009812 9.6e-11 70.5 112 46.4
BcaC08g43737 Brassica carinata HOM05D007776 ORTHO05D009812 2.1e-10 69.3 103 44.7
AT1G35430 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 4.8e-10 68.2 104 46.2
C06p11140 Brassica napus HOM05D007776 ORTHO05D009812 6.2e-10 67.8 103 43.7
BolC6t36249H Brassica oleracea HOM05D007776 ORTHO05D009812 6.2e-10 67.8 103 43.7
BraA09t38716Z Brassica rapa HOM05D007776 ORTHO05D009812 6.2e-10 67.8 103 43.7
Sp1g30150 Schrenkiella parvula HOM05D007776 ORTHO05D009812 6.2e-10 67.8 108 42.6
Sed0008767 Sechium edule HOM05D007776 ORTHO05D009812 8.1e-10 67.4 105 43.8
CARHR034200 Cardamine hirsuta HOM05D007776 ORTHO05D009812 1.4e-09 66.6 98 44.9
Potri.019G079800 Populus trichocarpa HOM05D007776 ORTHO05D009812 1.8e-09 66.2 106 47.2
THA.LOC104806792 Tarenaya hassleriana HOM05D007776 ORTHO05D009812 1.8e-09 66.2 120 40.8
AL1G50270 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 2.4e-09 65.9 104 45.2
ClCG11G008540 Citrullus lanatus HOM05D007776 ORTHO05D009812 5.3e-09 64.7 108 40.7
A09p31800 Brassica napus HOM05D007776 ORTHO05D009812 6.9e-09 64.3 99 43.4
Carub.0001s3303 Capsella rubella HOM05D007776 ORTHO05D009812 9.0e-09 63.9 109 41.3
Phvul.005G023800 Phaseolus vulgaris HOM05D007776 ORTHO05D009812 1.5e-08 63.2 87 46.0
Sabra13G0092600 Salix brachista HOM05D007776 ORTHO05D009812 2.0e-08 62.8 112 43.8
Lalb_Chr25g0282901 Lupinus albus HOM05D007776 ORTHO05D009812 2.6e-08 62.4 105 42.9
Psat5g210040 Pisum sativum HOM05D007776 ORTHO05D009812 2.6e-08 62.4 103 41.7
TPR.G27845 Trifolium pratense HOM05D000479 ORTHO05D009812 2.6e-08 62.4 96 43.8
Glyma.15G276200 Glycine max HOM05D007776 ORTHO05D009812 4.5e-08 61.6 77 49.4
SalBow7G1484 Salvia bowleyana HOM05D007776 ORTHO05D009812 5.8e-08 61.2 93 45.2
Thhalv10001838m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 9.9e-08 60.5 108 44.4
Ca_14480_v3 Cicer arietinum L. HOM05D007776 ORTHO05D009812 2.2e-07 59.3 104 42.3
Thhalv10029064m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 8.4e-07 57.4 120 37.5
Ah.05g178510 Amaranthus hybridus HOM05D007776 ORTHO05D009812 3.2e-06 55.5 101 41.6
BcaC01g04727 Brassica carinata HOM05D007776 ORTHO05D009812 7.1e-06 54.3 109 38.5


User provided reference genes

Program Settings