Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049250 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 4.4e-71 271.2 134 100.0
CSS0004189 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 7.0e-61 237.3 118 100.0
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 5.2e-56 221.1 118 94.1
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 5.7e-55 217.6 118 90.7
Rhsim03G0003600 Rhododendron simsii HOM05D004031 ORTHO05D006678 1.7e-54 216.1 118 91.5
Dinv24047 Davidia involucrata HOM05D004031 ORTHO05D006678 1.4e-53 213.0 118 88.1
GSVIVG01033461001 Vitis vinifera HOM05D004031 ORTHO05D006678 2.4e-53 212.2 118 87.3
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 9.1e-53 210.3 118 89.0
Lju124A22T15 Lonicera japonica HOM05D004031 ORTHO05D006678 9.1e-53 210.3 118 89.0
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 5.9e-52 207.6 118 86.4
TAR623G1150 Trochodendron aralioides HOM05D004031 ORTHO05D006678 7.7e-52 207.2 118 87.3
Hma1.2p1_0124F.1_g058310 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 1.3e-51 206.5 118 88.1
Hma1.2p1_0124F.1_g058320 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 1.3e-51 206.5 118 88.1
DCAR_009690 Daucus carota HOM05D004031 ORTHO05D006678 1.5e-50 203.0 121 81.8
ECA233G4423 Erigeron canadensis HOM05D004031 ORTHO05D006678 1.5e-50 203.0 118 83.1
CiPaw.10G024900 Carya illinoinensis HOM05D004031 ORTHO05D006678 2.5e-50 202.2 118 83.9
HanXRQChr13g0398361 Helianthus annuus HOM05D004031 ORTHO05D006678 3.2e-50 201.8 118 83.9
Eucgr.K01855 Eucalyptus grandis HOM05D004031 ORTHO05D006678 4.2e-50 201.4 118 82.2
Lsat_1_v5_gn_6_36500 Lactuca sativa HOM05D004031 ORTHO05D006678 7.2e-50 200.7 118 82.2
MD12G1054100 Malus domestica HOM05D004031 ORTHO05D006678 7.2e-50 200.7 118 83.9
PGR142G3960 Punica granatum HOM05D004031 ORTHO05D006678 1.2e-49 199.9 118 80.5
TWI74G0357 Tripterygium wilfordii HOM05D004031 ORTHO05D006678 1.2e-49 199.9 118 80.5
Oeu057586.3 Olea europaea HOM05D004031 ORTHO05D006678 1.6e-49 199.5 118 83.1
RcHm_v2.0_Chr3g0479121 Rosa chinensis HOM05D004031 ORTHO05D006678 2.1e-49 199.1 118 82.2
FAN02G1852 Fragaria x ananassa HOM05D004031 ORTHO05D006678 3.6e-49 198.4 118 82.2
FAN05G0520 Fragaria x ananassa HOM05D004031 ORTHO05D006678 3.6e-49 198.4 118 82.2
QL07p024684 Quercus lobata HOM05D004031 ORTHO05D006678 3.6e-49 198.4 118 83.1
Sabra16G0063400 Salix brachista HOM05D004031 ORTHO05D006678 4.7e-49 198.0 118 80.5
Migut.J01861 Erythranthe guttata HOM05D004031 ORTHO05D006678 6.1e-49 197.6 118 78.8
CANSAT64G2464 Cannabis sativa HOM05D004031 ORTHO05D006678 8.0e-49 197.2 118 83.1
FvH4_6g21770 Fragaria vesca HOM05D004031 ORTHO05D006678 8.0e-49 197.2 118 81.4
FAN14G1892 Fragaria x ananassa HOM05D004031 ORTHO05D006678 8.0e-49 197.2 118 81.4
Manes.09G038300 Manihot esculenta HOM05D004031 ORTHO05D006678 1.4e-48 196.4 118 80.5
Aqoxy1G00041 Aquilegia oxysepala HOM05D004031 ORTHO05D006678 1.8e-48 196.1 118 80.5
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 1.8e-48 196.1 118 83.1
Haze_20030 Corylus avellana HOM05D004031 ORTHO05D006678 1.8e-48 196.1 118 83.1
MELO3C009604.2 Cucumis melo HOM05D004031 ORTHO05D006678 1.8e-48 196.1 118 79.7
MSTRG.19923 Avicennia marina HOM05D004031 ORTHO05D006678 3.0e-48 195.3 118 78.8
AUR62015326 Chenopodium quinoa HOM05D004031 ORTHO05D006678 3.0e-48 195.3 118 78.8
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 4.0e-48 194.9 123 78.9
Potri.016G060500 Populus trichocarpa HOM05D004031 ORTHO05D006678 4.0e-48 194.9 118 78.8
MD14G1053000 Malus domestica HOM05D004031 ORTHO05D006678 5.2e-48 194.5 118 81.4
Phvul.001G144700 Phaseolus vulgaris HOM05D004031 ORTHO05D006678 5.2e-48 194.5 118 80.5
EL10Ac3g06876 Beta vulgaris HOM05D004031 ORTHO05D006678 6.8e-48 194.1 118 78.8
Gohir.A01G137300 Gossypium hirsutum HOM05D004031 ORTHO05D006678 8.8e-48 193.7 118 80.5
Gohir.D01G124700 Gossypium hirsutum HOM05D004031 ORTHO05D006678 8.8e-48 193.7 118 80.5
Gorai.002G155200 Gossypium raimondii HOM05D004031 ORTHO05D006678 8.8e-48 193.7 118 80.5
Sed0017241 Sechium edule HOM05D004031 ORTHO05D006678 8.8e-48 193.7 118 78.0
VMungo1383G1586 Vigna mungo HOM05D004031 ORTHO05D006678 8.8e-48 193.7 118 80.5
Atru.chr8.1164 Acer truncatum HOM05D004031 ORTHO05D006678 1.2e-47 193.4 118 81.4
CiPaw.09G027800 Carya illinoinensis HOM05D004031 ORTHO05D006678 1.2e-47 193.4 118 80.5
Glyma.19G150400 Glycine max HOM05D004031 ORTHO05D006678 1.2e-47 193.4 118 80.5
Prupe.7G082700 Prunus persica HOM05D004031 ORTHO05D006678 1.2e-47 193.4 118 79.7
Lalb_Chr15g0079131 Lupinus albus HOM05D004031 ORTHO05D006678 1.5e-47 193.0 118 80.5
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 1.5e-47 193.0 118 77.1
AUR62012010 Chenopodium quinoa HOM05D004031 ORTHO05D006678 2.0e-47 192.6 118 78.0
Glyma.03G147000 Glycine max HOM05D004031 ORTHO05D006678 2.0e-47 192.6 118 79.7
arahy.Tifrunner.gnm1.ann1.4B2YIP Arachis hypogaea HOM05D004031 ORTHO05D006678 3.4e-47 191.8 118 78.8
Ca_08544_v3 Cicer arietinum L. HOM05D004031 ORTHO05D006678 3.4e-47 191.8 123 78.0
Medtr7g093740 Medicago truncatula HOM05D004031 ORTHO05D006678 3.4e-47 191.8 118 80.5
Psat3g066880 Pisum sativum HOM05D004031 ORTHO05D006678 4.4e-47 191.4 118 79.7
Potri.006G195000 Populus trichocarpa HOM05D004031 ORTHO05D006678 4.4e-47 191.4 118 78.8
ClCG10G017700 Citrullus lanatus HOM05D004031 ORTHO05D006678 5.7e-47 191.0 118 75.4
THA.LOC104799283 Tarenaya hassleriana HOM05D004031 ORTHO05D006678 5.7e-47 191.0 118 78.0
Thecc.05G175900 Theobroma cacao HOM05D004031 ORTHO05D006678 5.7e-47 191.0 123 78.9
arahy.Tifrunner.gnm1.ann1.YX753W Arachis hypogaea HOM05D004031 ORTHO05D006678 7.5e-47 190.7 118 78.0
Cc06_g15550 Coffea canephora HOM05D004031 ORTHO05D006678 7.5e-47 190.7 118 80.5
Nn7g35952 Nelumbo nucifera HOM05D004031 ORTHO05D006678 7.5e-47 190.7 118 78.0
FAN09G1850 Fragaria x ananassa HOM05D004031 ORTHO05D006678 9.8e-47 190.3 118 79.7
SalBow6G5892 Salvia bowleyana HOM05D004031 ORTHO05D006678 9.8e-47 190.3 118 77.1
MBI13_g29636_MAGBIO Magnolia biondii HOM05D004031 ORTHO05D006678 1.7e-46 189.5 118 78.8
Solyc03g053010.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 2.2e-46 189.1 117 77.8
Sopen03g011490 Solanum pennellii HOM05D004031 ORTHO05D006678 2.2e-46 189.1 118 77.1
Peaxi162Scf00463g00518 Petunia axillaris HOM05D004031 ORTHO05D006678 2.8e-46 188.7 121 73.6
TPR.G13372 Trifolium pratense HOM05D004031 ORTHO05D006678 2.8e-46 188.7 117 80.3
AT3G12010 Arabidopsis thaliana HOM05D004031 ORTHO05D006678 6.3e-46 187.6 118 73.7
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 1.1e-45 186.8 118 76.3
Sc13g0002440 Simmondsia chinensis HOM05D004031 ORTHO05D006678 1.1e-45 186.8 118 74.6
CAN.G454.1 Capsicum annuum HOM05D004031 ORTHO05D006678 1.4e-45 186.4 118 75.4
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 1.4e-45 186.4 118 75.4
CARHR086570 Cardamine hirsuta HOM05D004031 ORTHO05D006678 1.8e-45 186.0 118 72.9
Lj1g0024200 Lotus japonicus HOM05D004031 ORTHO05D006678 1.8e-45 186.0 118 77.1
Carub.0003s1135 Capsella rubella HOM05D004031 ORTHO05D006678 1.2e-44 183.3 118 72.0
SGA_v2.0_scaffold105G30510 Striga asiatica HOM05D004031 ORTHO05D006678 2.0e-44 182.6 118 72.0
AL3G23620 Arabidopsis lyrata HOM05D004031 ORTHO05D006678 2.7e-44 182.2 116 73.3
Aa31LG3G5440 Aethionema arabicum HOM05D004031 ORTHO05D006678 3.5e-44 181.8 118 69.5
Aa31LG3G5500 Aethionema arabicum HOM05D004031 ORTHO05D006678 3.5e-44 181.8 118 69.5
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 1.7e-43 179.5 118 70.3
Sp3g10240 Schrenkiella parvula HOM05D004031 ORTHO05D006678 1.7e-43 179.5 118 71.2
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 2.3e-43 179.1 120 69.2
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 3.8e-43 178.3 118 69.5
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 3.8e-43 178.3 118 69.5
Os10g0400900 Oryza sativa ssp. japonica HOM05D004031 ORTHO05D006678 8.6e-43 177.2 123 67.5
A03p37440 Brassica napus HOM05D004031 ORTHO05D006678 1.1e-42 176.8 118 68.6
Zm00001eb048600 Zea mays HOM05D004031 ORTHO05D006678 2.5e-42 175.6 118 69.5
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 7.2e-42 174.1 123 66.7
unitig_21.g20577 Utricularia gibba HOM05D004031 ORTHO05D006678 1.6e-41 172.9 120 68.3
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 2.1e-41 172.6 118 70.3
PSO339G3947 Papaver somniferum HOM05D004031 ORTHO05D006678 3.0e-40 168.7 117 67.5
PSO384G3799 Papaver somniferum HOM05D004031 ORTHO05D006678 3.0e-40 168.7 117 68.4
CDE05G0445 Ceratophyllum demersum HOM05D004031 ORTHO05D006678 4.0e-40 168.3 118 69.5
Mapoly0005s0167 Marchantia polymorpha HOM05D004031 ORTHO05D006678 2.9e-38 162.2 120 65.8
Pp3c6_28540 Physcomitrium patens HOM05D004031 ORTHO05D006678 5.9e-36 154.5 118 61.0
Psat4g142720 Pisum sativum HOM05D003784 ORTHO05D004345 6.2e-33 144.4 119 62.2
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 1.4e-32 143.3 111 60.4
SMO143G0277 Selaginella moellendorffii HOM05D004031 ORTHO05D006678 4.9e-30 134.8 118 56.8
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 1.4e-29 133.3 108 60.2
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 1.4e-29 133.3 108 60.2
BolC5t34246H Brassica oleracea HOM05D004031 ORTHO05D006678 1.4e-29 133.3 108 60.2
Psat7g023080 Pisum sativum HOM05D004031 ORTHO05D006678 1.4e-29 133.3 79 81.0
Sed0010020 Sechium edule HOM05D004031 ORTHO05D006678 1.6e-28 129.8 118 59.3
Nn3g18463 Nelumbo nucifera HOM05D004031 ORTHO05D006678 3.3e-26 122.1 74 81.1
Psat4g142800 Pisum sativum HOM05D003784 ORTHO05D004345 4.3e-26 121.7 74 79.7
SEGI_16646 Sequoiadendron giganteum HOM05D004031 ORTHO05D006678 4.3e-18 95.1 65 67.7
Thhalv10020623m.g Eutrema salsugineum HOM05D004031 ORTHO05D006678 1.6e-17 93.2 53 81.1
Cpa.g.sc85.42 Carica papaya HOM05D004031 ORTHO05D006678 1.1e-13 80.5 57 64.9
Nn2g13219 Nelumbo nucifera HOM05D004031 ORTHO05D006678 3.0e-11 72.4 46 76.1
PRCOL_00003629 Prasinoderma coloniale HOM05D004031 ORTHO05D006678 1.1e-10 70.5 124 37.9
SHI31749 Sapria himalayana HOM05D003430 ORTHO05D004809 1.6e-09 66.6 58 53.4
SHI31750 Sapria himalayana HOM05D003430 ORTHO05D014065 5.2e-08 61.6 75 46.7


User provided reference genes

Program Settings