Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049243 Camellia sinensis var. sinensis HOM05D010054 ORTHO05D000001 3.0e-221 771.5 388 100.0
CSS0011173 Camellia sinensis var. sinensis HOM05D010054 ORTHO05D000001 4.6e-129 465.3 389 61.7
Rhsim10G0192500 Rhododendron simsii HOM05D010054 ORTHO05D000001 2.6e-39 167.2 376 29.3
Rhsim03G0198100 Rhododendron simsii HOM05D010054 ORTHO05D000001 1.4e-37 161.4 382 29.6
Rhsim04G0138000 Rhododendron simsii HOM05D010054 ORTHO05D000001 1.4e-37 161.4 382 29.6
Rhsim05G0231100 Rhododendron simsii HOM05D010054 ORTHO05D000001 1.4e-37 161.4 382 29.6
Rhsim08G0129500 Rhododendron simsii HOM05D010054 ORTHO05D000001 3.1e-37 160.2 385 28.6
Rhsim04G0060900 Rhododendron simsii HOM05D010054 ORTHO05D000001 4.1e-37 159.8 376 29.0
Rhsim11G0015400 Rhododendron simsii HOM05D010054 ORTHO05D000001 7.0e-37 159.1 384 28.6
RhsimUnG0016700 Rhododendron simsii HOM05D010054 ORTHO05D000001 1.3e-35 154.8 364 28.6
Dinv09509 Davidia involucrata HOM05D000031 ORTHO05D001033 6.5e-35 152.5 224 37.5
Rhsim11G0011900 Rhododendron simsii HOM05D010054 ORTHO05D000001 1.5e-31 141.4 378 28.0
Rhsim12G0091500 Rhododendron simsii HOM05D010054 ORTHO05D000001 1.2e-28 131.7 333 27.3
Rhsim09G0077800 Rhododendron simsii HOM05D010054 ORTHO05D000001 4.0e-24 116.7 270 27.8
Rhsim09G0164100 Rhododendron simsii HOM05D010054 ORTHO05D000001 1.5e-18 98.2 388 25.8
Rhsim10G0141600 Rhododendron simsii HOM05D010054 ORTHO05D000001 9.8e-15 85.5 238 28.2
CSS0008453 Camellia sinensis var. sinensis HOM05D015561 ORTHO05D000001 1.7e-14 84.7 79 55.7
Manes.15G146400 Manihot esculenta HOM05D001572 ORTHO05D000585 1.7e-14 84.7 212 29.2
Manes.17G097500 Manihot esculenta HOM05D001572 ORTHO05D000733 4.9e-14 83.2 210 27.1
CSS0021149 Camellia sinensis var. sinensis HOM05D015561 ORTHO05D000001 7.0e-13 79.3 72 58.3
CSS0024942 Camellia sinensis var. sinensis HOM05D015561 ORTHO05D000001 7.0e-13 79.3 72 58.3
Rhsim05G0108900 Rhododendron simsii HOM05D010054 ORTHO05D000001 2.7e-12 77.4 164 28.0
CSS0029969 Camellia sinensis var. sinensis HOM05D015561 ORTHO05D000001 7.8e-12 75.9 70 58.6
CSS0012552 Camellia sinensis var. sinensis HOM05D015561 ORTHO05D000001 1.0e-11 75.5 70 57.1
CSS0000481 Camellia sinensis var. sinensis HOM05D015463 ORTHO05D000001 1.3e-11 75.1 78 50.0
CSS0031804 Camellia sinensis var. sinensis HOM05D015561 ORTHO05D000001 1.7e-11 74.7 70 57.1
CSS0015854 Camellia sinensis var. sinensis HOM05D015463 ORTHO05D000001 3.0e-11 73.9 78 48.7
Dinv11637 Davidia involucrata HOM05D015440 ORTHO05D019087 6.6e-11 72.8 233 25.3
Rhsim11G0008600 Rhododendron simsii HOM05D010054 ORTHO05D000001 8.6e-11 72.4 159 27.7
Ca_06742_v3 Cicer arietinum L. HOM05D002147 ORTHO05D000733 1.5e-10 71.6 315 23.5
VMungo0647G0491 Vigna mungo HOM05D009155 ORTHO05D004853 1.5e-10 71.6 315 24.1
CSS0002180 Camellia sinensis var. sinensis HOM05D015561 ORTHO05D000001 1.9e-10 71.2 70 54.3
CSS0022495 Camellia sinensis var. sinensis HOM05D015561 ORTHO05D000001 2.5e-10 70.9 70 52.9
CSS0006317 Camellia sinensis var. sinensis HOM05D015561 ORTHO05D000001 5.6e-10 69.7 70 54.3
CSS0043493 Camellia sinensis var. sinensis HOM05D015463 ORTHO05D000001 5.6e-10 69.7 77 46.8
Dinv07940 Davidia involucrata HOM05D015440 ORTHO05D019087 5.6e-10 69.7 107 35.5
Dinv18414 Davidia involucrata HOM05D015440 ORTHO05D019087 5.6e-10 69.7 107 35.5
CSS0001086 Camellia sinensis var. sinensis HOM05D015463 ORTHO05D000001 7.3e-10 69.3 77 45.5
Ca_03346_v3 Cicer arietinum L. HOM05D002147 ORTHO05D000733 7.3e-10 69.3 250 26.0
Ca_03731_v3 Cicer arietinum L. HOM05D002147 ORTHO05D000733 7.3e-10 69.3 168 30.4
Ca_12058_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 7.3e-10 69.3 271 26.6
Ca_10758_v3 Cicer arietinum L. HOM05D002147 ORTHO05D000733 9.5e-10 68.9 209 25.4
Ca_20189_v3 Cicer arietinum L. HOM05D002147 ORTHO05D000733 9.5e-10 68.9 209 26.8
Ca_20277_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 9.5e-10 68.9 284 25.0
Ca_11743_v3 Cicer arietinum L. HOM05D002147 ORTHO05D000733 1.2e-09 68.6 181 28.7
Ca_06852_v3 Cicer arietinum L. HOM05D002147 ORTHO05D000733 1.6e-09 68.2 241 25.3
Rhsim06G0164800 Rhododendron simsii HOM05D010054 ORTHO05D000001 1.6e-09 68.2 125 28.0
Ca_02622_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.8e-09 67.4 290 23.8
Hund12704 Selenicereus undatus HOM05D002432 ORTHO05D000695 2.8e-09 67.4 244 26.6
Hund15557 Selenicereus undatus HOM05D002432 ORTHO05D000695 2.8e-09 67.4 301 24.6
Ca_02738_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.7e-09 66.6 251 26.3
Ca_19141_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.7e-09 66.6 302 24.8
Ca_19173_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.7e-09 66.6 287 24.0
CSS0005547 Camellia sinensis var. sinensis HOM05D015463 ORTHO05D000001 6.2e-09 66.2 74 48.6
Ca_12314_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 6.2e-09 66.2 317 24.0
CSS0034198 Camellia sinensis var. sinensis HOM05D015463 ORTHO05D000001 8.1e-09 65.9 75 48.0
Ca_20462_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.1e-09 65.9 240 25.0
Ca_20642_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.1e-08 65.5 275 25.1
Ca_28072_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.4e-08 65.1 338 23.4
arahy.Tifrunner.gnm1.ann1.IH7N68 Arachis hypogaea HOM05D001572 ORTHO05D000733 1.8e-08 64.7 364 23.4
CSS0030000 Camellia sinensis var. sinensis HOM05D015463 ORTHO05D000001 1.8e-08 64.7 75 45.3
Ca_20007_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.8e-08 64.7 278 25.9
Ca_27974_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.8e-08 64.7 237 26.6
CSS0046280 Camellia sinensis var. sinensis HOM05D015463 ORTHO05D000001 2.3e-08 64.3 75 42.7
Ca_00001_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.3e-08 64.3 286 22.4
Ca_05818_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.3e-08 64.3 270 25.6
Ca_20519_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 3.1e-08 63.9 213 26.3
Ca_19618_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.0e-08 63.5 319 25.1
Ca_19358_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000224 5.2e-08 63.2 234 25.2
Hund17630 Selenicereus undatus HOM05D002432 ORTHO05D000695 5.2e-08 63.2 221 25.8
Hund29392 Selenicereus undatus HOM05D002432 ORTHO05D000695 5.2e-08 63.2 265 26.0
Ca_02946_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 6.8e-08 62.8 241 26.6
Ca_03121_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 6.8e-08 62.8 212 26.9
CSS0010111 Camellia sinensis var. sinensis HOM05D015463 ORTHO05D000001 8.9e-08 62.4 75 44.0
Ca_02342_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.9e-08 62.4 325 23.4
Ca_08032_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.9e-08 62.4 212 26.4
Ca_11702_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.9e-08 62.4 212 26.9
Ca_13756_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.9e-08 62.4 212 25.9
Ca_25536_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.9e-08 62.4 268 25.7
Ca_03749_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 1.2e-07 62.0 219 25.1
Ca_05267_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.2e-07 62.0 319 24.8
Ca_25643_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.2e-07 62.0 274 25.9
Ca_28094_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.2e-07 62.0 262 24.8
Ca_28213_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.2e-07 62.0 286 23.1
Medtr6g472020 Medicago truncatula HOM05D001572 ORTHO05D000733 1.2e-07 62.0 191 25.7
Ca_02244_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.5e-07 61.6 317 23.0
Ca_19604_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.5e-07 61.6 315 24.1
Ca_12795_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.0e-07 61.2 296 24.0
Ca_27819_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.0e-07 61.2 286 22.4
Ca_26573_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 2.6e-07 60.8 224 27.2
Ca_11919_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 3.4e-07 60.5 212 25.9
Ca_13898_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 3.4e-07 60.5 325 23.1
Ca_26527_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 3.4e-07 60.5 355 23.7
Ca_27886_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 3.4e-07 60.5 286 22.0
Dinv24582 Davidia involucrata HOM05D008720 ORTHO05D011081 3.4e-07 60.5 183 24.0
Lalb_Chr15g0079951 Lupinus albus HOM05D002448 ORTHO05D002402 3.4e-07 60.5 315 22.9
Ca_02243_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.4e-07 60.1 233 26.6
Ca_02326_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.4e-07 60.1 286 22.0
Ca_12838_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.4e-07 60.1 266 24.4
Ca_18096_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.4e-07 60.1 315 23.2
Ca_22880_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.4e-07 60.1 355 23.4
Ca_27874_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.4e-07 60.1 237 25.7
Ca_28033_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.4e-07 60.1 276 23.6
Hund01590 Selenicereus undatus HOM05D002432 ORTHO05D000695 4.4e-07 60.1 244 24.6
Hund22786 Selenicereus undatus HOM05D002432 ORTHO05D000695 4.4e-07 60.1 239 25.1
Ca_03367_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 5.8e-07 59.7 346 22.5
Ca_06249_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 5.8e-07 59.7 259 25.5
Ca_11978_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 5.8e-07 59.7 253 22.9
Ca_27681_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 5.8e-07 59.7 208 25.0
Dinv43058 Davidia involucrata HOM05D015440 ORTHO05D000001 5.8e-07 59.7 160 25.0
Ca_02730_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 7.5e-07 59.3 212 25.9
Ca_03277_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 7.5e-07 59.3 241 25.3
Ca_04596_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 7.5e-07 59.3 286 22.0
Ca_07035_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 7.5e-07 59.3 346 22.3
Ca_14300_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 7.5e-07 59.3 299 25.4
Ca_27967_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 9.8e-07 58.9 270 24.1
Ca_03343_v3 Cicer arietinum L. HOM05D002147 ORTHO05D000733 1.3e-06 58.5 165 27.3
Ca_13823_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.3e-06 58.5 355 23.4
Ca_20276_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.3e-06 58.5 267 22.5
Ca_23500_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 1.3e-06 58.5 212 25.9
Ca_26529_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.3e-06 58.5 240 24.6
Ca_27543_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.3e-06 58.5 351 24.2
Ca_04440_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.7e-06 58.2 293 23.5
Ca_05329_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.7e-06 58.2 355 23.4
Ca_08009_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.7e-06 58.2 294 23.5
Ca_22942_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.7e-06 58.2 318 23.9
Ca_27695_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 1.7e-06 58.2 315 24.4
Ca_31010_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.7e-06 58.2 195 28.2
Ca_02982_v3 Cicer arietinum L. HOM05D000775 ORTHO05D003267 2.2e-06 57.8 194 26.8
Ca_03807_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.2e-06 57.8 241 26.6
Ca_06572_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.2e-06 57.8 299 24.1
Ca_14109_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.2e-06 57.8 299 24.1
Ca_20000_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.2e-06 57.8 355 23.7
Ca_20325_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.2e-06 57.8 299 24.1
Ca_22928_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.2e-06 57.8 289 22.8
Ca_27274_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 2.2e-06 57.8 253 22.1
Ca_27797_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.2e-06 57.8 262 24.4
Ca_27910_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.2e-06 57.8 274 22.6
Ca_28159_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.2e-06 57.8 358 24.3
Ca_18980_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.9e-06 57.4 345 22.9
Ca_27542_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.9e-06 57.4 321 25.2
Ca_28314_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.9e-06 57.4 278 25.5
COL.COLO4_07683 Corchorus olitorius HOM05D012390 ORTHO05D011992 2.9e-06 57.4 262 22.9
Ca_03864_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 3.7e-06 57.0 193 28.0
Ca_04649_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 3.7e-06 57.0 186 26.9
Ca_11827_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 3.7e-06 57.0 292 22.9
Ca_11918_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 3.7e-06 57.0 212 25.5
Ca_13783_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 3.7e-06 57.0 206 24.8
Ca_14299_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 3.7e-06 57.0 212 25.9
Ca_19662_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 3.7e-06 57.0 283 23.7
Ca_27252_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 3.7e-06 57.0 292 23.6
Ca_27745_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 3.7e-06 57.0 265 23.8
Ca_02241_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.9e-06 56.6 212 25.5
Ca_06590_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.9e-06 56.6 263 25.9
Ca_06822_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.9e-06 56.6 292 22.9
Ca_02801_v3 Cicer arietinum L. HOM05D002147 ORTHO05D000733 6.4e-06 56.2 191 22.5
Ca_12984_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 6.4e-06 56.2 361 23.0
Ca_13751_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 6.4e-06 56.2 339 23.6
Ca_23930_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 6.4e-06 56.2 274 23.4
Ca_27204_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 6.4e-06 56.2 328 23.2
Ca_28316_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 6.4e-06 56.2 190 27.9
Ca_05422_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.3e-06 55.8 274 22.6
Ca_12836_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.3e-06 55.8 292 23.6
Ca_14594_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.3e-06 55.8 305 23.3
Ca_14600_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.3e-06 55.8 355 23.7
Ca_20086_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.3e-06 55.8 292 22.9
Ca_22946_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.3e-06 55.8 327 23.5
Ca_27299_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.3e-06 55.8 274 23.7
Ca_27995_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.3e-06 55.8 278 23.7


User provided reference genes

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