Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 2.3e-90 335.5 166 100.0
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 1.3e-72 276.6 163 82.8
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 2.9e-72 275.4 165 78.2
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 6.0e-70 267.7 166 78.9
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 8.6e-69 263.8 153 82.4
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 2.5e-68 262.3 166 77.7
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 2.8e-67 258.8 166 72.9
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 4.7e-67 258.1 155 79.4
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.7e-67 258.1 157 75.8
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 6.2e-67 257.7 209 65.1
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 8.1e-67 257.3 153 81.0
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 8.1e-67 257.3 157 76.4
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 1.1e-66 256.9 161 75.2
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 1.1e-66 256.9 157 76.4
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 3.1e-66 255.4 168 75.0
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 8.9e-66 253.8 153 82.4
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.2e-65 253.4 166 72.3
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 1.5e-65 253.1 157 75.8
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.5e-65 253.1 157 75.8
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 1.5e-65 253.1 153 76.5
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 2.6e-65 252.3 153 75.8
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 3.4e-65 251.9 160 74.4
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 3.4e-65 251.9 166 71.7
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.4e-65 251.5 153 75.2
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 5.8e-65 251.1 166 72.3
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 5.8e-65 251.1 153 77.8
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 1.3e-64 250.0 172 71.5
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 1.3e-64 250.0 155 76.1
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 2.2e-64 249.2 166 71.1
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 3.7e-64 248.4 158 73.4
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 4.9e-64 248.1 166 74.7
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 6.4e-64 247.7 153 74.5
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.9e-63 246.1 165 73.3
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 2.4e-63 245.7 155 76.1
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 4.1e-63 245.0 153 73.2
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 4.1e-63 245.0 153 73.9
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 7.1e-63 244.2 151 73.5
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 7.1e-63 244.2 152 74.3
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 1.2e-62 243.4 221 59.7
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 1.6e-62 243.0 158 72.2
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 4.6e-62 241.5 153 76.5
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 6.0e-62 241.1 165 72.7
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.7e-61 239.6 162 72.2
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 1.7e-61 239.6 200 61.5
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 2.3e-61 239.2 152 72.4
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 2.3e-61 239.2 153 73.9
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 3.0e-61 238.8 153 75.8
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 3.9e-61 238.4 133 85.7
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 3.9e-61 238.4 153 75.8
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 5.1e-61 238.0 166 68.1
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 6.6e-61 237.7 166 69.9
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 6.6e-61 237.7 153 73.9
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 6.6e-61 237.7 158 73.4
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 1.1e-60 236.9 153 74.5
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 1.5e-60 236.5 169 71.0
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.5e-60 236.5 151 74.8
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 1.9e-60 236.1 154 72.1
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 1.9e-60 236.1 154 72.1
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 2.5e-60 235.7 153 71.9
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 2.5e-60 235.7 153 71.9
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 2.5e-60 235.7 165 70.3
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 3.3e-60 235.3 156 71.8
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 5.6e-60 234.6 152 70.4
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 7.3e-60 234.2 166 66.9
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 1.2e-59 233.4 166 68.1
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 1.4e-58 229.9 153 71.9
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 4.0e-58 228.4 153 72.5
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 6.8e-58 227.6 164 65.2
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 1.2e-57 226.9 161 67.7
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 2.0e-57 226.1 153 71.2
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 9.9e-57 223.8 153 71.2
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 2.9e-56 222.2 162 67.9
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 2.9e-56 222.2 153 69.3
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 3.8e-56 221.9 153 69.9
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 4.9e-56 221.5 153 68.6
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 6.4e-56 221.1 153 68.0
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 6.4e-56 221.1 149 70.5
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 8.4e-56 220.7 153 68.0
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 8.4e-56 220.7 153 69.3
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 1.4e-55 219.9 153 67.3
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 4.2e-55 218.4 153 68.0
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 7.1e-55 217.6 170 63.5
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 3.9e-53 211.8 152 65.1
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 9.6e-52 207.2 160 63.1
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 8.1e-51 204.1 153 64.1
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 1.4e-50 203.4 155 65.2
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 1.5e-49 199.9 147 65.3
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 9.9e-49 197.2 114 76.3
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 2.9e-48 195.7 113 76.1
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.9e-47 193.0 165 62.4
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 1.6e-46 189.9 115 73.0
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 2.1e-46 189.5 151 60.3
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 2.7e-46 189.1 117 72.6
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 5.3e-42 174.9 114 70.2
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 5.8e-41 171.4 108 75.0
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 1.1e-39 167.2 89 80.9
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 5.4e-39 164.9 166 56.0
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 3.5e-38 162.2 110 70.0
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 6.0e-38 161.4 94 79.8
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 5.3e-26 121.7 155 43.9
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.7e-24 116.7 75 72.0
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 8.2e-19 97.8 98 51.0
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 4.2e-15 85.5 108 48.1
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 1.6e-14 83.6 81 61.7
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 5.1e-13 78.6 53 66.0
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 6.3e-11 71.6 48 62.5


User provided reference genes

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