Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 0.0e+00 1411.0 680 100.0
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 4.5e-281 971.1 686 73.6
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 9.1e-266 920.2 878 58.0
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 1.8e-261 906.0 670 70.3
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 1.7e-243 846.3 718 63.5
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 1.6e-238 829.7 656 65.7
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 2.8e-230 802.4 687 63.3
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 1.4e-229 800.0 731 59.8
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 1.5e-223 780.0 683 61.9
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 3.7e-219 765.4 749 57.7
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 2.7e-217 759.2 681 61.1
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 3.6e-214 748.8 679 60.2
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 1.1e-213 747.3 701 57.8
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 2.9e-211 739.2 703 57.8
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 3.6e-206 722.2 678 58.3
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 1.4e-205 720.3 698 56.0
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 7.6e-204 714.5 699 55.7
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 9.9e-204 714.1 683 57.5
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 8.4e-203 711.1 639 59.5
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 6.0e-201 704.9 700 55.3
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 8.7e-200 701.0 647 58.3
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 1.2e-198 697.2 672 57.4
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 3.1e-197 692.6 655 56.9
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 5.2e-197 691.8 695 55.5
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 2.2e-195 686.4 502 68.3
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 1.1e-194 684.1 616 58.4
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 1.2e-193 680.6 727 53.9
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 2.1e-193 679.9 694 54.8
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 6.0e-193 678.3 633 57.5
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 1.1e-191 674.1 732 52.5
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 1.1e-191 674.1 595 59.8
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 1.9e-191 673.3 441 73.9
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 9.6e-191 671.0 503 66.0
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 1.6e-190 670.2 694 53.3
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 2.1e-190 669.8 572 61.4
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 6.2e-190 668.3 652 55.5
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 1.1e-189 667.5 572 61.0
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 1.4e-189 667.2 509 66.4
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 2.4e-189 666.4 655 56.6
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 6.9e-189 664.8 509 66.2
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 9.0e-189 664.5 579 59.4
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 2.0e-188 663.3 699 53.5
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 1.1e-186 657.5 735 51.2
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 2.7e-185 652.9 430 74.0
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 3.5e-185 652.5 451 71.6
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.8e-184 650.2 499 67.3
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 5.1e-184 648.7 700 52.6
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 1.5e-183 647.1 468 68.2
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 1.1e-181 641.0 525 61.9
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 5.3e-181 638.6 468 68.2
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 4.5e-180 635.6 691 52.8
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 9.3e-178 627.9 545 61.1
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 1.2e-177 627.5 659 52.4
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 6.0e-177 625.2 547 59.6
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 3.0e-176 622.9 498 61.4
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 1.5e-175 620.5 523 61.2
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 7.4e-175 618.2 695 50.8
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 9.6e-175 617.8 517 61.3
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 2.1e-169 600.1 547 57.8
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 7.9e-169 598.2 457 66.3
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 2.5e-167 593.2 543 57.3
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 7.4e-167 591.7 533 57.6
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 2.2e-163 580.1 732 49.0
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 2.9e-163 579.7 622 54.3
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 3.8e-163 579.3 665 49.5
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 3.1e-157 559.7 470 61.1
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 8.5e-155 551.6 442 62.0
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 2.4e-141 506.9 372 65.6
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 4.2e-138 496.1 495 55.6
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 2.6e-119 433.7 458 49.1
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 5.7e-119 432.6 504 50.4
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 7.5e-119 432.2 287 72.5
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 1.4e-112 411.4 490 51.0
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 1.3e-102 378.3 296 63.5
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 4.3e-98 363.2 462 48.5
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 1.4e-88 331.6 409 50.1
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 1.3e-86 325.1 287 57.8
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 1.1e-85 322.0 369 47.7
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 3.2e-69 267.3 280 50.7
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 3.0e-59 234.2 192 59.4
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 1.4e-40 172.2 144 63.9
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 4.1e-40 170.6 133 57.1
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 1.0e-38 166.0 300 40.0
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 6.7e-35 153.3 133 58.6
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 2.2e-30 138.3 539 25.8
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 2.1e-28 131.7 77 75.3
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 2.6e-23 114.8 126 51.6
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 5.9e-15 87.0 94 52.1
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 3.8e-14 84.3 78 51.3
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 8.5e-14 83.2 191 35.1
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 6.1e-12 77.0 169 31.4
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 4.0e-11 74.3 313 31.0
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 4.0e-11 74.3 57 59.6
Cre03.g188750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D028824 6.8e-11 73.6 205 30.2
PRCOL_00005975 Prasinoderma coloniale HOM05D000032 ORTHO05D028824 3.4e-10 71.2 185 27.6
Actinidia24059 Actinidia chinensis HOM05D002949 ORTHO05D003151 4.4e-10 70.9 132 37.9
Haze_26842 Corylus avellana HOM05D000032 ORTHO05D028824 1.1e-08 66.2 188 29.3
SGA_v2.0_scaffold26G11386 Striga asiatica HOM05D007621 ORTHO05D009631 2.0e-07 62.0 58 53.4


User provided reference genes

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