Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.5e-217 759.2 387 100.0
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 2.3e-165 585.9 383 77.8
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 5.0e-160 568.2 393 75.1
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 1.0e-152 543.9 382 73.3
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 7.0e-146 521.2 400 69.2
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 3.8e-144 515.4 385 69.4
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 2.7e-142 509.2 380 70.8
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 4.0e-141 505.4 385 69.1
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 1.2e-140 503.8 383 69.2
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 1.7e-139 500.0 366 69.1
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 2.2e-139 499.6 383 68.7
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 6.3e-139 498.0 376 67.6
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 1.2e-137 493.8 382 67.8
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 1.2e-137 493.8 374 66.6
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 1.6e-137 493.4 384 68.2
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 3.5e-137 492.3 367 68.1
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 5.9e-137 491.5 378 67.2
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 1.3e-136 490.3 365 69.6
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 1.7e-136 490.0 380 67.1
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 2.9e-136 489.2 376 67.8
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 4.2e-135 485.3 376 66.8
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.8e-133 479.9 376 65.2
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.8e-133 479.9 378 65.9
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 1.8e-133 479.9 365 66.0
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.3e-133 479.6 378 65.3
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 5.2e-133 478.4 375 65.9
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 5.2e-133 478.4 365 66.8
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 8.9e-133 477.6 390 63.1
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.5e-132 476.9 379 63.9
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.3e-131 473.8 373 65.4
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 3.7e-131 472.2 373 65.1
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 4.9e-131 471.9 383 65.5
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 6.3e-131 471.5 370 64.3
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 9.2e-130 467.6 387 62.3
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 2.0e-129 466.5 379 64.6
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 3.5e-129 465.7 369 64.8
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 3.5e-129 465.7 372 66.1
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 5.9e-129 464.9 378 63.5
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 1.0e-128 464.2 378 64.3
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 2.3e-128 463.0 386 61.7
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 2.3e-128 463.0 381 64.0
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 5.0e-128 461.8 377 65.0
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 1.1e-127 460.7 407 60.4
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 2.5e-127 459.5 376 62.8
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 9.5e-127 457.6 447 58.6
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 1.2e-126 457.2 380 63.4
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 1.2e-124 450.7 378 62.7
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 2.6e-124 449.5 326 72.1
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 3.4e-124 449.1 372 63.7
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 4.4e-124 448.7 374 63.6
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 8.3e-123 444.5 375 63.7
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 2.4e-122 443.0 370 64.1
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 4.1e-122 442.2 373 60.6
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 4.1e-122 442.2 373 60.9
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 4.1e-122 442.2 370 63.5
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 4.1e-122 442.2 370 63.8
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 7.8e-121 438.0 334 65.9
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 6.6e-120 434.9 384 60.4
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.5e-119 433.7 383 60.6
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 1.9e-119 433.3 372 62.4
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 4.3e-119 432.2 376 62.8
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 5.6e-119 431.8 373 59.8
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 2.1e-118 429.9 384 60.2
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.6e-118 429.1 284 76.8
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 6.2e-118 428.3 384 58.9
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 6.2e-118 428.3 340 62.9
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 8.0e-118 427.9 384 58.9
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 1.8e-117 426.8 382 57.3
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.8e-117 426.8 284 73.9
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 2.6e-116 422.9 382 56.0
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 9.8e-116 421.0 378 57.7
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 2.2e-115 419.9 376 59.3
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 3.7e-115 419.1 376 59.6
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 8.3e-115 417.9 385 58.4
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 8.3e-115 417.9 355 61.7
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 1.4e-114 417.2 369 58.3
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 3.2e-114 416.0 382 57.1
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 4.1e-114 415.6 382 56.8
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 1.5e-111 407.1 376 56.1
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 2.1e-110 403.3 355 58.9
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 8.1e-110 401.4 355 58.6
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 1.1e-109 401.0 355 58.3
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 3.1e-109 399.4 338 60.9
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.9e-107 392.9 378 57.9
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 3.7e-107 392.5 313 63.9
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 4.9e-107 392.1 290 68.6
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 1.1e-106 391.0 349 60.2
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 1.1e-103 380.9 377 57.6
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 6.8e-101 371.7 266 71.1
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 8.9e-101 371.3 348 56.9
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.4e-100 369.4 344 56.4
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 7.6e-100 368.2 290 61.7
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 4.6e-97 359.0 320 61.2
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 6.0e-97 358.6 399 48.4
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 1.7e-96 357.1 250 71.6
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 5.6e-95 352.1 256 70.7
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 2.8e-94 349.7 239 72.4
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 6.2e-94 348.6 276 61.2
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 2.0e-92 343.6 332 53.3
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.3e-88 330.1 182 84.1
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 7.3e-87 325.1 371 48.2
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 1.2e-84 317.8 323 51.1
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 5.8e-84 315.5 296 58.4
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 5.4e-82 308.9 341 52.5
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 8.7e-80 301.6 171 82.5
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 2.6e-76 290.0 286 52.8
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 2.3e-56 223.8 226 51.3
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.8e-53 214.2 198 60.1
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 4.4e-47 193.0 137 65.7
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 2.0e-44 184.1 245 43.7
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.0e-40 171.8 209 46.9
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 6.3e-38 162.5 140 58.6
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 3.1e-37 160.2 187 49.2
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 4.1e-37 159.8 188 47.9
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 4.2e-26 123.2 71 83.1
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 8.9e-16 89.0 109 48.6
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.6e-12 78.2 51 68.6
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.9e-10 71.2 55 60.0
Nn2g16007 Nelumbo nucifera HOM05D006491 ORTHO05D008412 1.8e-08 64.7 91 50.5


User provided reference genes

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